RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 HIRAP54198 1017 aaPredicted RBP12.91□□□□□ -0.34
HDAC8-214ENST00000439122 NOMO3P69849 1222 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 MAMLD1Q13495 774 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 DLK2Q6UY11 383 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 LBX2Q6XYB7 198 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 TRIM72Q6ZMU5 477 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 MMS22LQ6ZRQ5 1243 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 ZBTB33Q86T24 672 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 MICALL1Q8N3F8 863 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 CNKSR2Q8WXI2 1034 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 RAPGEF5Q92565 580 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 PGM2Q96G03 612 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 DDX27Q96GQ7 796 aaKnown RBP12.91□□□□□ -0.34
HDAC8-214ENST00000439122 CCDC114Q96M63 670 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 HERPUD2Q9BSE4 406 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 IMPG2Q9BZV3 1241 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 CNOT10Q9H9A5 744 aaKnown RBP12.91□□□□□ -0.34
HDAC8-214ENST00000439122 USTQ9Y2C2 406 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 PPP2R3BQ9Y5P8 575 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 ADGRA2Q96PE1 1338 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 CNTNAP2Q9UHC6 1331 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 TTLL13PA6NNM8 815 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 O00370 1275 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 USP2O75604 605 aaPredicted RBP12.91□□□□□ -0.34
HDAC8-214ENST00000439122 GJC1P36383 396 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 TCF7P36402 384 aaPredicted RBP12.91□□□□□ -0.34
HDAC8-214ENST00000439122 TRIP13Q15645 432 aaPredicted RBP12.91□□□□□ -0.34
HDAC8-214ENST00000439122 SH3D19Q5HYK7 790 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 SCARA3Q6AZY7 606 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 OTUD6BQ8N6M0 293 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.91□□□□□ -0.34
HDAC8-214ENST00000439122 EPS8L3Q8TE67 593 aaKnown RBP12.91□□□□□ -0.34
HDAC8-214ENST00000439122 MAIP1Q8WWC4 291 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 PRPF31Q8WWY3 499 aaKnown RBP12.91□□□□□ -0.34
HDAC8-214ENST00000439122 KCNN1Q92952 543 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 SLCO2A1Q92959 643 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 FAM212AQ96EL1 285 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 SELENOSQ9BQE4 189 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 TMEM134Q9H6X4 195 aa12.91□□□□□ -0.34
HDAC8-214ENST00000439122 MRPL47Q9HD33 250 aaKnown RBP12.91□□□□□ -0.34
HDAC8-214ENST00000439122 POLR2AP24928 1970 aaKnown RBP12.9□□□□□ -0.34
HDAC8-214ENST00000439122 MEFVO15553 781 aaPredicted RBP12.9□□□□□ -0.34
HDAC8-214ENST00000439122 PAEPP09466 180 aa12.9□□□□□ -0.34
HDAC8-214ENST00000439122 SRGAP2CP0DJJ0 459 aa12.9□□□□□ -0.34
HDAC8-214ENST00000439122 RALAP11233 206 aa12.9□□□□□ -0.34
HDAC8-214ENST00000439122 MARK3P27448 753 aa12.9□□□□□ -0.34
HDAC8-214ENST00000439122 TNFSF9P41273 254 aa12.9□□□□□ -0.34
HDAC8-214ENST00000439122 ADCY2Q08462 1091 aa12.9□□□□□ -0.34
HDAC8-214ENST00000439122 NEDD9Q14511 834 aa12.9□□□□□ -0.34
HDAC8-214ENST00000439122 TARBP2Q15633 366 aaKnown RBP12.9□□□□□ -0.34
HDAC8-214ENST00000439122 C6orf118Q5T5N4 469 aa12.9□□□□□ -0.34
HDAC8-214ENST00000439122 FAM160B1Q5W0V3 765 aa12.9□□□□□ -0.34
HDAC8-214ENST00000439122 WHRNQ9P202 907 aa12.9□□□□□ -0.34
HDAC8-214ENST00000439122 SNCAIPQ9Y6H5 919 aa12.9□□□□□ -0.34
HDAC8-214ENST00000439122 SOWAHBA6NEL2 793 aa12.9□□□□□ -0.34
HDAC8-214ENST00000439122 TLR3O15455 904 aaKnown RBP12.9□□□□□ -0.34
HDAC8-214ENST00000439122 GJB6O95452 261 aa12.9□□□□□ -0.34
HDAC8-214ENST00000439122 GAS8O95995 478 aa12.9□□□□□ -0.34
HDAC8-214ENST00000439122 MAN1A1P33908 653 aa12.9□□□□□ -0.34
HDAC8-214ENST00000439122 NF2P35240 595 aa12.9□□□□□ -0.34
HDAC8-214ENST00000439122 VPS41P49754 854 aa12.9□□□□□ -0.34
HDAC8-214ENST00000439122 TAS2R40P59535 323 aa12.9□□□□□ -0.34
HDAC8-214ENST00000439122 IFI35P80217 286 aaPredicted RBP12.9□□□□□ -0.34
HDAC8-214ENST00000439122 LY6KQ17RY6 165 aa12.9□□□□□ -0.34
HDAC8-214ENST00000439122 PHF13Q86YI8 300 aaPredicted RBP12.9□□□□□ -0.34
HDAC8-214ENST00000439122 RIOX2Q8IUF8 465 aa12.9□□□□□ -0.34
HDAC8-214ENST00000439122 RHOT1Q8IXI2 618 aa12.9□□□□□ -0.34
HDAC8-214ENST00000439122 GRK7Q8WTQ7 553 aa12.9□□□□□ -0.34
HDAC8-214ENST00000439122 FAM118BQ9BPY3 351 aa12.9□□□□□ -0.34
HDAC8-214ENST00000439122 PAGR1Q9BTK6 254 aa12.9□□□□□ -0.34
HDAC8-214ENST00000439122 FAM129AQ9BZQ8 928 aa12.9□□□□□ -0.34
HDAC8-214ENST00000439122 DCLK3Q9C098 648 aa12.9□□□□□ -0.34
HDAC8-214ENST00000439122 R3HDM2Q9Y2K5 976 aaKnown RBP12.9□□□□□ -0.34
HDAC8-214ENST00000439122 RASGRF2O14827 1237 aa12.89□□□□□ -0.35
HDAC8-214ENST00000439122 TP73O15350 636 aa12.89□□□□□ -0.35
HDAC8-214ENST00000439122 PSTPIP1O43586 416 aa12.89□□□□□ -0.35
HDAC8-214ENST00000439122 MAFO75444 373 aaPredicted RBP12.89□□□□□ -0.35
HDAC8-214ENST00000439122 ACSL3O95573 720 aa12.89□□□□□ -0.35
HDAC8-214ENST00000439122 CST3P01034 146 aaPredicted RBP12.89□□□□□ -0.35
HDAC8-214ENST00000439122 CD58P19256 250 aa12.89□□□□□ -0.35
HDAC8-214ENST00000439122 ITIH2P19823 946 aa12.89□□□□□ -0.35
HDAC8-214ENST00000439122 IFT88Q13099 833 aa12.89□□□□□ -0.35
HDAC8-214ENST00000439122 GADL1Q6ZQY3 521 aa12.89□□□□□ -0.35
HDAC8-214ENST00000439122 CROCCP2Q86T23 111 aa12.89□□□□□ -0.35
HDAC8-214ENST00000439122 ZNF606Q8WXB4 792 aa12.89□□□□□ -0.35
HDAC8-214ENST00000439122 SEPT1Q8WYJ6 367 aa12.89□□□□□ -0.35
HDAC8-214ENST00000439122 SNF8Q96H20 258 aa12.89□□□□□ -0.35
HDAC8-214ENST00000439122 VCPIP1Q96JH7 1222 aa12.89□□□□□ -0.35
HDAC8-214ENST00000439122 DDX23Q9BUQ8 820 aaKnown RBP12.89□□□□□ -0.35
HDAC8-214ENST00000439122 MTMR12Q9C0I1 747 aa12.89□□□□□ -0.35
HDAC8-214ENST00000439122 SPATC1LQ9H0A9 340 aa12.89□□□□□ -0.35
HDAC8-214ENST00000439122 SCINQ9Y6U3 715 aa12.89□□□□□ -0.35
HDAC8-214ENST00000439122 ATXN2Q99700 1313 aaKnown RBP12.89□□□□□ -0.35
HDAC8-214ENST00000439122 CHN1P15882 459 aa12.89□□□□□ -0.35
HDAC8-214ENST00000439122 ADCY8P40145 1251 aa12.89□□□□□ -0.35
HDAC8-214ENST00000439122 QPCTQ16769 361 aa12.89□□□□□ -0.35
HDAC8-214ENST00000439122 TTC31Q49AM3 519 aaPredicted RBP12.89□□□□□ -0.35
HDAC8-214ENST00000439122 ZFYVE27Q5T4F4 411 aa12.89□□□□□ -0.35
HDAC8-214ENST00000439122 RNF187Q5TA31 235 aaPredicted RBP12.89□□□□□ -0.35
HDAC8-214ENST00000439122 PLEKHA7Q6IQ23 1121 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms