RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 Q6ZS52 159 aa12.35□□□□□ -0.43
CSTF3-203ENST00000438862 PDZD4Q76G19 769 aaPredicted RBP12.35□□□□□ -0.43
CSTF3-203ENST00000438862 YAF2Q8IY57 180 aa12.35□□□□□ -0.43
CSTF3-203ENST00000438862 FAM200AQ8TCP9 573 aa12.35□□□□□ -0.43
CSTF3-203ENST00000438862 TCEAL4Q96EI5 215 aa12.35□□□□□ -0.43
CSTF3-203ENST00000438862 LRRC2Q9BYS8 371 aa12.35□□□□□ -0.43
CSTF3-203ENST00000438862 GPR88Q9GZN0 384 aa12.35□□□□□ -0.43
CSTF3-203ENST00000438862 C2orf42Q9NWW7 574 aa12.35□□□□□ -0.43
CSTF3-203ENST00000438862 KLK14Q9P0G3 267 aa12.35□□□□□ -0.43
CSTF3-203ENST00000438862 MSRB2Q9Y3D2 182 aa12.35□□□□□ -0.43
CSTF3-203ENST00000438862 AKAP13Q12802 2813 aa12.35□□□□□ -0.43
CSTF3-203ENST00000438862 FLNBO75369 2602 aaKnown RBP12.35□□□□□ -0.43
CSTF3-203ENST00000438862 VWA8A3KMH1 1905 aa12.35□□□□□ -0.43
CSTF3-203ENST00000438862 A0A1B0GUA9 196 aa12.34□□□□□ -0.43
CSTF3-203ENST00000438862 SPECC1L-ADORA2AF8WAN1 911 aa12.34□□□□□ -0.43
CSTF3-203ENST00000438862 PRRG1O14668 218 aa12.34□□□□□ -0.43
CSTF3-203ENST00000438862 ADAMTS3O15072 1205 aa12.34□□□□□ -0.43
CSTF3-203ENST00000438862 EDIL3O43854 480 aa12.34□□□□□ -0.43
CSTF3-203ENST00000438862 ATG13O75143 517 aa12.34□□□□□ -0.43
CSTF3-203ENST00000438862 RHOBTB1O94844 696 aa12.34□□□□□ -0.43
CSTF3-203ENST00000438862 THP07101 528 aa12.34□□□□□ -0.43
CSTF3-203ENST00000438862 ARF4P18085 180 aaPredicted RBP12.34□□□□□ -0.43
CSTF3-203ENST00000438862 VIPR2P41587 438 aa12.34□□□□□ -0.43
CSTF3-203ENST00000438862 QARSP47897 775 aaKnown RBP12.34□□□□□ -0.43
CSTF3-203ENST00000438862 CCINQ13939 588 aa12.34□□□□□ -0.43
CSTF3-203ENST00000438862 TFDP1Q14186 410 aa12.34□□□□□ -0.43
CSTF3-203ENST00000438862 PLK5Q496M5 336 aa12.34□□□□□ -0.43
CSTF3-203ENST00000438862 ANKS3Q6ZW76 656 aa12.34□□□□□ -0.43
CSTF3-203ENST00000438862 OTUD6AQ7L8S5 288 aa12.34□□□□□ -0.43
CSTF3-203ENST00000438862 ELMOD1Q8N336 334 aa12.34□□□□□ -0.43
CSTF3-203ENST00000438862 CAMKK1Q8N5S9 505 aa12.34□□□□□ -0.43
CSTF3-203ENST00000438862 LEMD2Q8NC56 503 aa12.34□□□□□ -0.43
CSTF3-203ENST00000438862 GJA10Q969M2 543 aa12.34□□□□□ -0.43
CSTF3-203ENST00000438862 ZSWIM3Q96MP5 696 aa12.34□□□□□ -0.43
CSTF3-203ENST00000438862 CACNG4Q9UBN1 327 aa12.34□□□□□ -0.43
CSTF3-203ENST00000438862 SLC38A8A6NNN8 435 aa12.33□□□□□ -0.44
CSTF3-203ENST00000438862 HEPACAM2A8MVW5 462 aa12.33□□□□□ -0.44
CSTF3-203ENST00000438862 TRAPPC3O43617 180 aa12.33□□□□□ -0.44
CSTF3-203ENST00000438862 ABLIM3O94929 683 aa12.33□□□□□ -0.44
CSTF3-203ENST00000438862 NPTXRO95502 500 aa12.33□□□□□ -0.44
CSTF3-203ENST00000438862 CAVIN2O95810 425 aa12.33□□□□□ -0.44
CSTF3-203ENST00000438862 ATF2P15336 505 aa12.33□□□□□ -0.44
CSTF3-203ENST00000438862 FCHO2Q0JRZ9 810 aa12.33□□□□□ -0.44
CSTF3-203ENST00000438862 ELF2Q15723 593 aa12.33□□□□□ -0.44
CSTF3-203ENST00000438862 AMHR2Q16671 573 aa12.33□□□□□ -0.44
CSTF3-203ENST00000438862 WDR44Q5JSH3 913 aa12.33□□□□□ -0.44
CSTF3-203ENST00000438862 IQCEQ6IPM2 695 aa12.33□□□□□ -0.44
CSTF3-203ENST00000438862 TCEAL6Q6IPX3 200 aa12.33□□□□□ -0.44
CSTF3-203ENST00000438862 TCEAL8Q8IYN2 117 aa12.33□□□□□ -0.44
CSTF3-203ENST00000438862 ZSCAN18Q8TBC5 510 aaPredicted RBP12.33□□□□□ -0.44
CSTF3-203ENST00000438862 TCEAL3Q969E4 200 aa12.33□□□□□ -0.44
CSTF3-203ENST00000438862 ZNF512Q96ME7 567 aaPredicted RBP12.33□□□□□ -0.44
CSTF3-203ENST00000438862 DUSP15Q9H1R2 295 aaPredicted RBP12.33□□□□□ -0.44
CSTF3-203ENST00000438862 TMEM9BQ9NQ34 198 aa12.33□□□□□ -0.44
CSTF3-203ENST00000438862 ITPR1Q14643 2758 aa12.32□□□□□ -0.44
CSTF3-203ENST00000438862 CYP3A7-CYP3A51PA0A087WV96 503 aa12.32□□□□□ -0.44
CSTF3-203ENST00000438862 CCDC196A0A1B0GTZ2 297 aa12.32□□□□□ -0.44
CSTF3-203ENST00000438862 BCLAF3A2AJT9 711 aaKnown RBP12.32□□□□□ -0.44
CSTF3-203ENST00000438862 TMEM189-UBE2V1I3L0A0 370 aa12.32□□□□□ -0.44
CSTF3-203ENST00000438862 EXTL3O43909 919 aa12.32□□□□□ -0.44
CSTF3-203ENST00000438862 CYP3A7P24462 503 aa12.32□□□□□ -0.44
CSTF3-203ENST00000438862 CTHP32929 405 aa12.32□□□□□ -0.44
CSTF3-203ENST00000438862 CCR2P41597 374 aa12.32□□□□□ -0.44
CSTF3-203ENST00000438862 RCAN1P53805 252 aa12.32□□□□□ -0.44
CSTF3-203ENST00000438862 CREB5Q02930 508 aa12.32□□□□□ -0.44
CSTF3-203ENST00000438862 MBTD1Q05BQ5 628 aa12.32□□□□□ -0.44
CSTF3-203ENST00000438862 EMC2Q15006 297 aa12.32□□□□□ -0.44
CSTF3-203ENST00000438862 SLC8B1Q6J4K2 584 aa12.32□□□□□ -0.44
CSTF3-203ENST00000438862 TXNDC11Q6PKC3 985 aa12.32□□□□□ -0.44
CSTF3-203ENST00000438862 PDZD3Q86UT5 571 aa12.32□□□□□ -0.44
CSTF3-203ENST00000438862 PROSER1Q86XN7 944 aa12.32□□□□□ -0.44
CSTF3-203ENST00000438862 NFKBIZQ9BYH8 718 aa12.32□□□□□ -0.44
CSTF3-203ENST00000438862 C22orf23Q9BZE7 217 aa12.32□□□□□ -0.44
CSTF3-203ENST00000438862 WDR70Q9NW82 654 aa12.32□□□□□ -0.44
CSTF3-203ENST00000438862 BRPF3Q9ULD4 1205 aa12.32□□□□□ -0.44
CSTF3-203ENST00000438862 SLC8A2Q9UPR5 921 aa12.32□□□□□ -0.44
CSTF3-203ENST00000438862 GPSM3Q9Y4H4 160 aa12.32□□□□□ -0.44
CSTF3-203ENST00000438862 ASH1LQ9NR48 2969 aaKnown RBP12.32□□□□□ -0.44
CSTF3-203ENST00000438862 LNP1A1A4G5 178 aa12.31□□□□□ -0.44
CSTF3-203ENST00000438862 GOLGA8AA7E2F4 631 aa12.31□□□□□ -0.44
CSTF3-203ENST00000438862 GOLGA8BA8MQT2 603 aa12.31□□□□□ -0.44
CSTF3-203ENST00000438862 PTGESO14684 152 aa12.31□□□□□ -0.44
CSTF3-203ENST00000438862 SLC27A2O14975 620 aa12.31□□□□□ -0.44
CSTF3-203ENST00000438862 KHNYNO15037 678 aaKnown RBP12.31□□□□□ -0.44
CSTF3-203ENST00000438862 P4HBP07237 508 aaKnown RBP12.31□□□□□ -0.44
CSTF3-203ENST00000438862 CDC27P30260 824 aa12.31□□□□□ -0.44
CSTF3-203ENST00000438862 HOXC13P31276 330 aa12.31□□□□□ -0.44
CSTF3-203ENST00000438862 RDXP35241 583 aaKnown RBP12.31□□□□□ -0.44
CSTF3-203ENST00000438862 SOX9P48436 509 aa12.31□□□□□ -0.44
CSTF3-203ENST00000438862 PXNP49023 591 aaPredicted RBP12.31□□□□□ -0.44
CSTF3-203ENST00000438862 ROR1Q01973 937 aa12.31□□□□□ -0.44
CSTF3-203ENST00000438862 KARSQ15046 597 aaKnown RBP12.31□□□□□ -0.44
CSTF3-203ENST00000438862 PON2Q15165 354 aa12.31□□□□□ -0.44
CSTF3-203ENST00000438862 NAB2Q15742 525 aa12.31□□□□□ -0.44
CSTF3-203ENST00000438862 ARHGAP29Q52LW3 1261 aa12.31□□□□□ -0.44
CSTF3-203ENST00000438862 HAUS6Q7Z4H7 955 aa12.31□□□□□ -0.44
CSTF3-203ENST00000438862 C4orf19Q8IY42 314 aa12.31□□□□□ -0.44
CSTF3-203ENST00000438862 CCDC148Q8NFR7 591 aa12.31□□□□□ -0.44
CSTF3-203ENST00000438862 ESYT1Q9BSJ8 1104 aa12.31□□□□□ -0.44
CSTF3-203ENST00000438862 SLC32A1Q9H598 525 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms