RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 NCK2O43639 380 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 MAFO75444 373 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 TADA3O75528 432 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 SKAP2O75563 359 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 TUSC2O75896 110 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 KLHL18O94889 574 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 CFBP00751 764 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 CSTBP04080 98 aaKnown RBP4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 SOD2P04179 222 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 CCDC159P0C7I6 412 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 FGFR1P11362 822 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 PABPC1P11940 636 aaKnown RBP4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 KCNA6P17658 529 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 TNFSF4P23510 183 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 ANP32AP39687 249 aaKnown RBP4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 GRIA2P42262 883 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 PIK3CBP42338 1070 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 TUBP50607 506 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 CLNS1AP54105 237 aaKnown RBP4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 DRG2P55039 364 aaKnown RBP4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 IL2P60568 153 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 DSG1Q02413 1049 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 MAP2K1Q02750 393 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 ICA1Q05084 483 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 SCARB2Q14108 478 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 SLMAPQ14BN4 828 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 TAF12Q16514 161 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 ANO4Q32M45 955 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 SV2CQ496J9 727 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 PIK3R6Q5UE93 754 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 NSMFQ6X4W1 530 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 UBE2R2Q712K3 238 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 DPP9Q86TI2 863 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 HEATR4Q86WZ0 1026 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 IQCA1Q86XH1 822 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 VSIG1Q86XK7 387 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 PPIL6Q8IXY8 311 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 TRMT2AQ8IZ69 625 aaKnown RBP4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 ANKRD52Q8NB46 1076 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 CCDC191Q8NCU4 936 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 RCBTB1Q8NDN9 531 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 DIS3LQ8TF46 1054 aaKnown RBP4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 HPS3Q969F9 1004 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 NEIL1Q96FI4 390 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 CEP95Q96GE4 821 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 TEKT5Q96M29 485 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 ZNF830Q96NB3 372 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 TSGA13Q96PP4 275 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 CRAMP1Q96RY5 1269 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 BAG1Q99933 345 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 SDF4Q9BRK5 362 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 TMEM120AQ9BXJ8 343 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 TRIM6Q9C030 488 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 EPB41L1Q9H4G0 881 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 CERS4Q9HA82 394 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 EMC7Q9NPA0 242 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 DMRT3Q9NQL9 472 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 DLL4Q9NR61 685 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 C14orf119Q9NWQ9 140 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 PIH1D1Q9NWS0 290 aaKnown RBP4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 RABL2AQ9UBK7 228 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 MTRRQ9UBK8 725 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 GRHPRQ9UBQ7 328 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 CFDP1Q9UEE9 299 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 A0A087X0M5 115 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 A0A1B0GX30 115 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 F5H0A9 414 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 BOLA2-SMG1P6H3BVE0 249 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 KRIT1O00522 736 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 SLC27A2O14975 620 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 EFCAB14O75071 495 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 ZBED4O75132 1171 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 B3GALNT1O75752 331 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 HSPA4LO95757 839 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 CKMP06732 381 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 SLC3A2P08195 630 aaKnown RBP4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 ADH4P08319 380 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 POU2F2P09086 479 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 C1SP09871 688 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 CKMT1AP12532 417 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 LCP1P13796 627 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 DESP17661 470 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 CNTFP26441 200 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 CSF2RBP32927 897 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 TNNT3P45378 269 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 CD151P48509 253 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 TRPC1P48995 793 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 RCAN1P53805 252 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 INHBCP55103 352 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 ARL4CP56559 192 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 RAC3P60763 192 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 SOS1Q07889 1333 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 FAPQ12884 760 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 CDC16Q13042 620 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 MOGSQ13724 837 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 LRRC32Q14392 662 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 POSTNQ15063 836 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 ASIC2Q16515 512 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 SKIDA1Q1XH10 827 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 PRSS53Q2L4Q9 553 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms