RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 TRPV5Q9NQA5 729 aa11.98□□□□□ -0.49
SPTLC1P4-201ENST00000435997 PLSCR2Q9NRY7 297 aa11.98□□□□□ -0.49
SPTLC1P4-201ENST00000435997 MAFFQ9ULX9 164 aa11.98□□□□□ -0.49
SPTLC1P4-201ENST00000435997 PCDHGA2Q9Y5H1 932 aa11.98□□□□□ -0.49
SPTLC1P4-201ENST00000435997 CACNA1IQ9P0X4 2223 aa11.98□□□□□ -0.49
SPTLC1P4-201ENST00000435997 COL4A2P08572 1712 aa11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 CEP250Q9BV73 2442 aa11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 NCANO14594 1321 aa11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 FAM170BA6NMN3 283 aa11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 H7C4K7 107 aa11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 ARNTLO00327 626 aa11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 SLC16A4O15374 487 aa11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 KINO60870 393 aaKnown RBP11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 LILRB5O75023 590 aa11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 VNN2O95498 520 aa11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 MAPTP10636 758 aaKnown RBP11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 TDGF1P13385 188 aa11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 PLS3P13797 630 aa11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 PTPN2P17706 415 aa11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 CD72P21854 359 aa11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 SLC12A3P55017 1021 aa11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 ATP2C1P98194 919 aaPredicted RBP11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 GNL2Q13823 731 aaKnown RBP11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 NOLC1Q14978 699 aaKnown RBP eCLIP11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 FAM78AQ5JUQ0 283 aa11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 ZBTB41Q5SVQ8 909 aa11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 ZPBP2Q6X784 338 aa11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 FAM184AQ8NB25 1140 aa11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 MCRS1Q96EZ8 462 aa11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 ZBTB45Q96K62 511 aaPredicted RBP11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 ZSCAN31Q96LW9 406 aaPredicted RBP11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 NELL2Q99435 816 aa11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 HAPLN2Q9GZV7 340 aa11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 CYP4F11Q9HBI6 524 aa11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 HEBP1Q9NRV9 189 aa11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 SPATA6Q9NWH7 488 aaPredicted RBP11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 DLL3Q9NYJ7 618 aa11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 KCND2Q9NZV8 630 aa11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 CEP72Q9P209 647 aa11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 TUBGCP4Q9UGJ1 667 aa11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 AFF4Q9UHB7 1163 aaKnown RBP11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 PATJQ8NI35 1801 aa11.97□□□□□ -0.49
SPTLC1P4-201ENST00000435997 TTC26A0AVF1 554 aa11.96□□□□□ -0.49
SPTLC1P4-201ENST00000435997 M0QZQ0 153 aa11.96□□□□□ -0.49
SPTLC1P4-201ENST00000435997 PRRG1O14668 218 aa11.96□□□□□ -0.49
SPTLC1P4-201ENST00000435997 LAMTOR5O43504 91 aa11.96□□□□□ -0.49
SPTLC1P4-201ENST00000435997 FAM189A1O60320 539 aa11.96□□□□□ -0.49
SPTLC1P4-201ENST00000435997 OAZ2O95190 189 aa11.96□□□□□ -0.49
SPTLC1P4-201ENST00000435997 LRPAP1P30533 357 aa11.96□□□□□ -0.49
SPTLC1P4-201ENST00000435997 ZBTB6Q15916 424 aa11.96□□□□□ -0.49
SPTLC1P4-201ENST00000435997 CTXN3Q4LDR2 81 aa11.96□□□□□ -0.49
SPTLC1P4-201ENST00000435997 TMEM119Q4V9L6 283 aa11.96□□□□□ -0.49
SPTLC1P4-201ENST00000435997 DTHD1Q6ZMT9 781 aa11.96□□□□□ -0.49
SPTLC1P4-201ENST00000435997 MAMSTRQ6ZN01 415 aa11.96□□□□□ -0.49
SPTLC1P4-201ENST00000435997 MAP4K3Q8IVH8 894 aa11.96□□□□□ -0.49
SPTLC1P4-201ENST00000435997 KIAA2013Q8IYS2 634 aa11.96□□□□□ -0.49
SPTLC1P4-201ENST00000435997 SYT2Q8N9I0 419 aaPredicted RBP11.96□□□□□ -0.49
SPTLC1P4-201ENST00000435997 LEMD2Q8NC56 503 aa11.96□□□□□ -0.49
SPTLC1P4-201ENST00000435997 DDX12PQ92771 950 aa11.96□□□□□ -0.49
SPTLC1P4-201ENST00000435997 TBC1D32Q96NH3 1257 aa11.96□□□□□ -0.49
SPTLC1P4-201ENST00000435997 PNMA5Q96PV4 448 aa11.96□□□□□ -0.49
SPTLC1P4-201ENST00000435997 CORO1BQ9BR76 489 aa11.96□□□□□ -0.49
SPTLC1P4-201ENST00000435997 EPC1Q9H2F5 836 aa11.96□□□□□ -0.49
SPTLC1P4-201ENST00000435997 PLEKHA5Q9HAU0 1116 aa11.96□□□□□ -0.49
SPTLC1P4-201ENST00000435997 TRPV4Q9HBA0 871 aa11.96□□□□□ -0.49
SPTLC1P4-201ENST00000435997 ANKFY1Q9P2R3 1169 aa11.96□□□□□ -0.49
SPTLC1P4-201ENST00000435997 PCDHB8Q9UN66 801 aa11.96□□□□□ -0.49
SPTLC1P4-201ENST00000435997 NUB1Q9Y5A7 615 aa11.96□□□□□ -0.49
SPTLC1P4-201ENST00000435997 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.96□□□□□ -0.49
SPTLC1P4-201ENST00000435997 SFI1A8K8P3 1242 aa11.95□□□□□ -0.5
SPTLC1P4-201ENST00000435997 ZNF197O14709 1029 aa11.95□□□□□ -0.5
SPTLC1P4-201ENST00000435997 ADRB2P07550 413 aa11.95□□□□□ -0.5
SPTLC1P4-201ENST00000435997 CXCL8P10145 99 aa11.95□□□□□ -0.5
SPTLC1P4-201ENST00000435997 CYP3A5P20815 502 aa11.95□□□□□ -0.5
SPTLC1P4-201ENST00000435997 ELF1P32519 619 aa11.95□□□□□ -0.5
SPTLC1P4-201ENST00000435997 MCM4P33991 863 aa11.95□□□□□ -0.5
SPTLC1P4-201ENST00000435997 ADCY1Q08828 1119 aa11.95□□□□□ -0.5
SPTLC1P4-201ENST00000435997 GRM2Q14416 872 aa11.95□□□□□ -0.5
SPTLC1P4-201ENST00000435997 VITQ6UXI7 678 aa11.95□□□□□ -0.5
SPTLC1P4-201ENST00000435997 ZNF852Q6ZMS4 543 aa11.95□□□□□ -0.5
SPTLC1P4-201ENST00000435997 PDZD4Q76G19 769 aaPredicted RBP11.95□□□□□ -0.5
SPTLC1P4-201ENST00000435997 TMC8Q8IU68 726 aa11.95□□□□□ -0.5
SPTLC1P4-201ENST00000435997 TMEM130Q8N3G9 435 aa11.95□□□□□ -0.5
SPTLC1P4-201ENST00000435997 DCLK2Q8N568 766 aa11.95□□□□□ -0.5
SPTLC1P4-201ENST00000435997 APPL2Q8NEU8 664 aa11.95□□□□□ -0.5
SPTLC1P4-201ENST00000435997 SMARCD2Q92925 531 aa11.95□□□□□ -0.5
SPTLC1P4-201ENST00000435997 ZSWIM3Q96MP5 696 aa11.95□□□□□ -0.5
SPTLC1P4-201ENST00000435997 IER2Q9BTL4 223 aa11.95□□□□□ -0.5
SPTLC1P4-201ENST00000435997 LRRC3Q9BY71 257 aa11.95□□□□□ -0.5
SPTLC1P4-201ENST00000435997 CHRDQ9H2X0 955 aa11.95□□□□□ -0.5
SPTLC1P4-201ENST00000435997 ZFP14Q9HCL3 533 aa11.95□□□□□ -0.5
SPTLC1P4-201ENST00000435997 ZSCAN32Q9NX65 697 aa11.95□□□□□ -0.5
SPTLC1P4-201ENST00000435997 MRPS17Q9Y2R5 130 aaKnown RBP11.95□□□□□ -0.5
SPTLC1P4-201ENST00000435997 YIPF1Q9Y548 306 aa11.95□□□□□ -0.5
SPTLC1P4-201ENST00000435997 NCOR2Q9Y618 2525 aa11.95□□□□□ -0.5
SPTLC1P4-201ENST00000435997 F5P12259 2224 aa11.94□□□□□ -0.5
SPTLC1P4-201ENST00000435997 MED19A0JLT2 244 aaPredicted RBP11.94□□□□□ -0.5
SPTLC1P4-201ENST00000435997 NCAM2O15394 837 aa11.94□□□□□ -0.5
SPTLC1P4-201ENST00000435997 PIGRP01833 764 aa11.94□□□□□ -0.5
SPTLC1P4-201ENST00000435997 CLTAP09496 248 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms