RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 RHBDF2Q6PJF5 856 aa11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 EXOC3L1Q86VI1 746 aa11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 CACNA2D3Q8IZS8 1091 aa11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 SLC17A8Q8NDX2 589 aa11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 GPRASP2Q96D09 838 aa11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 C11orf70Q9BRQ4 267 aa11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 CNOT10Q9H9A5 744 aaKnown RBP11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 C1orf112Q9NSG2 853 aa11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 GGA2Q9UJY4 613 aa11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 DGAT1O75907 488 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 C4BPAP04003 597 aaKnown RBP11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 BACE1P56817 501 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 LRRC14Q15048 493 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 ZACNQ401N2 412 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 LRRC34Q8IZ02 419 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 ATP6V0A1Q93050 837 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 SLC40A1Q9NP59 571 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 ETAA1Q9NY74 926 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 PARP2Q9UGN5 583 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 ARID2Q68CP9 1835 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 TTLL13PA6NNM8 815 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 RALAP11233 206 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 TCF4P15884 667 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 ACO1P21399 889 aaKnown RBP11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 GARTP22102 1010 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 GTF2H1P32780 548 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 GJC1P36383 396 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 LIG4P49917 911 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 ADCY2Q08462 1091 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 ANKRD20A8PQ5CZ79 823 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 C6orf118Q5T5N4 469 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 GKAP1Q5VSY0 366 aaPredicted RBP11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 ABHD15Q6UXT9 468 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 ASAP3Q8TDY4 903 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 PAIP2Q9BPZ3 127 aaKnown RBP11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 SENP7Q9BQF6 1050 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 MLXIPLQ9NP71 852 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 A1CFQ9NQ94 594 aaKnown RBP11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 KLHL11Q9NVR0 708 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 SLC9A2Q9UBY0 812 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 HACL1Q9UJ83 578 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 MYBL1P10243 752 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 ITGA8P53708 1063 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 CALCOCO2Q13137 446 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 SLMAPQ14BN4 828 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 KYNUQ16719 465 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 ATP13A4Q4VNC1 1196 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 MON1BQ7L1V2 547 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 ATP6V0A4Q9HBG4 840 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 INTS9Q9NV88 658 aaKnown RBP11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 PCDHB2Q9Y5E7 798 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 RLFQ13129 1914 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 PARP14Q460N5 1801 aa11.08□□□□□ -0.64
CLSTN1-203ENST00000435891 AGTP01019 485 aa11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 CYP1A1P04798 512 aaPredicted RBP11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 TMEM270Q6UE05 265 aa11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 PNMA8AQ86V59 439 aaPredicted RBP11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 PARP9Q8IXQ6 854 aa11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 C3orf20Q8ND61 904 aa11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 SPDYE1Q8NFV5 336 aaPredicted RBP11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 OR5B17Q8NGF7 314 aa11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 MGARPQ8TDB4 240 aa11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 CENPTQ96BT3 561 aa11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 DCLK3Q9C098 648 aa11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 C17orf75Q9HAS0 396 aa11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 EXTL3O43909 919 aa11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 PSAPP07602 524 aa11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 PIK3CAP42336 1068 aa11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 NSFP46459 744 aaKnown RBP11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 MYO1EQ12965 1108 aa11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 CCDC50Q8IVM0 306 aa11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 MCPH1Q8NEM0 835 aa11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 RDM1Q8NG50 284 aa11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 NSUN6Q8TEA1 469 aaKnown RBP11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 CCT6BQ92526 530 aa11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 FNBP1Q96RU3 617 aa11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 TARS2Q9BW92 718 aaKnown RBP11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 CYP39A1Q9NYL5 469 aa11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 ANKFY1Q9P2R3 1169 aa11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 USTQ9Y2C2 406 aa11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 CETPP11597 493 aa11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 CD58P19256 250 aa11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 CLDN10P78369 228 aa11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 CENPCQ03188 943 aa11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 EMC2Q15006 297 aa11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 ZNF772Q68DY9 489 aaPredicted RBP11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 MICALL2Q8IY33 904 aa11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 SLCO2A1Q92959 643 aa11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 TMEM109Q9BVC6 243 aa11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 AGO2Q9UKV8 859 aaKnown RBP11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 NUB1Q9Y5A7 615 aa11.07□□□□□ -0.64
CLSTN1-203ENST00000435891 KLHL33A6NCF5 533 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 HARSP12081 509 aaKnown RBP11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 PTPRAP18433 802 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 GLRA2P23416 452 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 KLF1Q13351 362 aaPredicted RBP11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 PSMD6Q15008 389 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 CNGA2Q16280 664 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 SEPT14Q6ZU15 432 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms