RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 SNF8Q96H20 258 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 MAGEB10Q96LZ2 347 aaPredicted RBP11.74□□□□□ -0.53
SCN4A-201ENST00000435607 NARFQ9UHQ1 456 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 MTMR6Q9Y217 621 aa11.74□□□□□ -0.53
SCN4A-201ENST00000435607 PGK2P07205 417 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 ODC1P11926 461 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 CYP2B6P20813 491 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 HUNKP57058 714 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 EIF3EP60228 445 aaKnown RBP11.73□□□□□ -0.53
SCN4A-201ENST00000435607 HDLBPQ00341 1268 aaKnown RBP11.73□□□□□ -0.53
SCN4A-201ENST00000435607 CYFIP1Q7L576 1253 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 LUZP2Q86TE4 346 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 CLEC4FQ8N1N0 589 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 GPRC5AQ8NFJ5 357 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 CFAP43Q8NDM7 1665 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 LRRC14BA6NHZ5 514 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 M0R3G1 203 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 ST13P50502 369 aaKnown RBP11.73□□□□□ -0.53
SCN4A-201ENST00000435607 TBL3Q12788 808 aaKnown RBP11.73□□□□□ -0.53
SCN4A-201ENST00000435607 GNASQ5JWF2 1037 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 SLC20A1Q8WUM9 679 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 EPN3Q9H201 632 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 TTC7AQ9ULT0 858 aaPredicted RBP11.73□□□□□ -0.53
SCN4A-201ENST00000435607 HEG1Q9ULI3 1381 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 HAUS5O94927 633 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 SLC1A1P43005 524 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 ZRANB3Q5FWF4 1079 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 CEP78Q5JTW2 689 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 FAM9CQ8IZT9 166 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 JADE3Q92613 823 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 SCN3BQ9NY72 215 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 APPL1Q9UKG1 709 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 CHMP2BQ9UQN3 213 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 FAM50BQ9Y247 325 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 NPHP4O75161 1426 aaPredicted RBP11.73□□□□□ -0.53
SCN4A-201ENST00000435607 KCNN4O15554 427 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 SFR1Q86XK3 245 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 URODP06132 367 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 PNPLA4P41247 253 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 PRIM2P49643 509 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 ALDH6A1Q02252 535 aaKnown RBP11.73□□□□□ -0.53
SCN4A-201ENST00000435607 PDIA2Q13087 525 aaKnown RBP11.73□□□□□ -0.53
SCN4A-201ENST00000435607 NOTUMQ6P988 496 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 C11orf88Q6PI97 169 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 KDELC2Q7Z4H8 507 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 MOSPD2Q8NHP6 518 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 RBBP8Q99708 897 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 PALMDQ9NP74 551 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 ZNRF3Q9ULT6 936 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 AGAP1Q9UPQ3 857 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 NR2E3Q9Y5X4 410 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 FNTAP49354 379 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 ARFIP2P53365 341 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 CACNB3P54284 484 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 KIF23Q02241 960 aaPredicted RBP11.73□□□□□ -0.53
SCN4A-201ENST00000435607 HDDC2Q7Z4H3 204 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 SYTL1Q8IYJ3 562 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 SPIRE2Q8WWL2 714 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 PAGE5Q96GU1 130 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 CARD14Q9BXL6 1004 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 PRRG3Q9BZD7 231 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 POTEFA5A3E0 1075 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 ZNF284Q2VY69 593 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 BEND6Q5SZJ8 279 aaPredicted RBP11.73□□□□□ -0.53
SCN4A-201ENST00000435607 CHSY1Q86X52 802 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 DTNBP1Q96EV8 351 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 C17orf80Q9BSJ5 609 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 LMBRD1Q9NUN5 540 aa11.73□□□□□ -0.53
SCN4A-201ENST00000435607 CNOT7Q9UIV1 285 aaKnown RBP11.73□□□□□ -0.53
SCN4A-201ENST00000435607 C2orf81A6NN90 581 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 EEF2KO00418 725 aaKnown RBP11.72□□□□□ -0.53
SCN4A-201ENST00000435607 SUPT20HL2P0C7V6 817 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 GPC1P35052 558 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 USP11P51784 963 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 CUL4AQ13619 759 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 ZNF280CQ8ND82 737 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 CCL15-CCL14A0A0B4J2E2 113 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 CCL15Q16663 113 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 RPAINQ86UA6 219 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 IL17REQ8NFR9 667 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 RAD54LQ92698 747 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 CENPTQ96BT3 561 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 C1QTNF7Q9BXJ2 289 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 TUFT1Q9NNX1 390 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 ATP7AQ04656 1500 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 YWHABP31946 246 aaKnown RBP11.72□□□□□ -0.53
SCN4A-201ENST00000435607 RANBP1P43487 201 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 DEFA1P59665 94 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 DEFA3P59666 94 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 PLD1Q13393 1074 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 ALFQ53S48 1182 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 XKR3Q5GH77 459 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 RABGAP1LQ5R372 815 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 DNAJC1Q96KC8 554 aaKnown RBP11.72□□□□□ -0.53
SCN4A-201ENST00000435607 ADI1Q9BV57 179 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 CD209Q9NNX6 404 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 SPTLC3Q9NUV7 552 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 NOP53Q9NZM5 478 aaKnown RBP11.72□□□□□ -0.53
SCN4A-201ENST00000435607 GTF2A1LQ9UNN4 478 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 PLA2G4CQ9UP65 541 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms