RNA–Protein interactions for RNA: ENST00000435218.6

TMEM40-204, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM40, Length 1,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-204ENST00000435218 CCDC42Q96M95 316 aa16.22■□□□□ 0.19
TMEM40-204ENST00000435218 EIF3CQ99613 913 aaKnown RBP16.22■□□□□ 0.19
TMEM40-204ENST00000435218 APOL6Q9BWW8 343 aa16.22■□□□□ 0.19
TMEM40-204ENST00000435218 NIF3L1Q9GZT8 377 aa16.22■□□□□ 0.19
TMEM40-204ENST00000435218 CXCL16Q9H2A7 254 aa16.22■□□□□ 0.19
TMEM40-204ENST00000435218 UBN1Q9NPG3 1134 aa16.22■□□□□ 0.19
TMEM40-204ENST00000435218 SPTLC3Q9NUV7 552 aa16.22■□□□□ 0.19
TMEM40-204ENST00000435218 TBX21Q9UL17 535 aa16.22■□□□□ 0.19
TMEM40-204ENST00000435218 NUB1Q9Y5A7 615 aa16.22■□□□□ 0.19
TMEM40-204ENST00000435218 ADGRG1Q9Y653 693 aa16.22■□□□□ 0.19
TMEM40-204ENST00000435218 RBAK-RBAKDNI3L0D1 243 aa16.21■□□□□ 0.19
TMEM40-204ENST00000435218 PTGESO14684 152 aa16.21■□□□□ 0.19
TMEM40-204ENST00000435218 INPPL1O15357 1258 aa16.21■□□□□ 0.19
TMEM40-204ENST00000435218 NBNO60934 754 aa16.21■□□□□ 0.19
TMEM40-204ENST00000435218 GFPT2O94808 682 aa16.21■□□□□ 0.19
TMEM40-204ENST00000435218 CCDC175P0C221 793 aa16.21■□□□□ 0.19
TMEM40-204ENST00000435218 ATF7P17544 494 aaPredicted RBP16.21■□□□□ 0.19
TMEM40-204ENST00000435218 EIF4A3P38919 411 aaKnown RBP16.21■□□□□ 0.19
TMEM40-204ENST00000435218 RBP5P82980 135 aa16.21■□□□□ 0.19
TMEM40-204ENST00000435218 GPNMBQ14956 572 aa16.21■□□□□ 0.19
TMEM40-204ENST00000435218 TDRD12Q587J7 1177 aaKnown RBP16.21■□□□□ 0.19
TMEM40-204ENST00000435218 TOGARAM2Q6ZUX3 1019 aa16.21■□□□□ 0.19
TMEM40-204ENST00000435218 ZNF598Q86UK7 904 aaKnown RBP16.21■□□□□ 0.19
TMEM40-204ENST00000435218 LRRC52Q8N7C0 313 aa16.21■□□□□ 0.19
TMEM40-204ENST00000435218 UBR7Q8N806 425 aa16.21■□□□□ 0.19
TMEM40-204ENST00000435218 PAWRQ96IZ0 340 aaKnown RBP16.21■□□□□ 0.19
TMEM40-204ENST00000435218 TSPYL2Q9H2G4 693 aaPredicted RBP16.21■□□□□ 0.19
TMEM40-204ENST00000435218 HIPK3Q9H422 1215 aa16.21■□□□□ 0.19
TMEM40-204ENST00000435218 HAUS4Q9H6D7 363 aa16.21■□□□□ 0.19
TMEM40-204ENST00000435218 FNDC1Q4ZHG4 1894 aaPredicted RBP16.21■□□□□ 0.19
TMEM40-204ENST00000435218 ANO9A1A5B4 782 aa16.2■□□□□ 0.18
TMEM40-204ENST00000435218 C9IYK1 514 aa16.2■□□□□ 0.18
TMEM40-204ENST00000435218 ZSCAN12O43309 604 aa16.2■□□□□ 0.18
TMEM40-204ENST00000435218 EOMESO95936 686 aa16.2■□□□□ 0.18
TMEM40-204ENST00000435218 CXCL10P02778 98 aa16.2■□□□□ 0.18
TMEM40-204ENST00000435218 ACO1P21399 889 aaKnown RBP16.2■□□□□ 0.18
TMEM40-204ENST00000435218 KIF11P52732 1056 aa16.2■□□□□ 0.18
TMEM40-204ENST00000435218 FAM189BP81408 668 aa16.2■□□□□ 0.18
TMEM40-204ENST00000435218 SCARA3Q6AZY7 606 aa16.2■□□□□ 0.18
TMEM40-204ENST00000435218 SPOPLQ6IQ16 392 aa16.2■□□□□ 0.18
TMEM40-204ENST00000435218 AGMOQ6ZNB7 445 aa16.2■□□□□ 0.18
TMEM40-204ENST00000435218 SLC24A5Q71RS6 500 aa16.2■□□□□ 0.18
TMEM40-204ENST00000435218 NECAB2Q7Z6G3 386 aa16.2■□□□□ 0.18
TMEM40-204ENST00000435218 ECHDC2Q86YB7 292 aa16.2■□□□□ 0.18
TMEM40-204ENST00000435218 GSTCDQ8NEC7 633 aa16.2■□□□□ 0.18
TMEM40-204ENST00000435218 PPP1R10Q96QC0 940 aaKnown RBP16.2■□□□□ 0.18
TMEM40-204ENST00000435218 SYT11Q9BT88 431 aa16.2■□□□□ 0.18
TMEM40-204ENST00000435218 BCO2Q9BYV7 579 aa16.2■□□□□ 0.18
TMEM40-204ENST00000435218 SLC38A7Q9NVC3 462 aa16.2■□□□□ 0.18
TMEM40-204ENST00000435218 PPP2R2CQ9Y2T4 447 aa16.2■□□□□ 0.18
TMEM40-204ENST00000435218 ATP8B3O60423 1300 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 UMODL1Q5DID0 1318 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 KRT19P08727 400 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 PNMA6AP0CW24 399 aaPredicted RBP16.19■□□□□ 0.18
TMEM40-204ENST00000435218 LRPAP1P30533 357 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 POLR2BP30876 1174 aaKnown RBP16.19■□□□□ 0.18
TMEM40-204ENST00000435218 KRT83P78385 493 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 PTK2Q05397 1052 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 BMS1Q14692 1282 aaKnown RBP16.19■□□□□ 0.18
TMEM40-204ENST00000435218 ZNF667Q5HYK9 610 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 RTN4RL1Q86UN2 441 aaPredicted RBP16.19■□□□□ 0.18
TMEM40-204ENST00000435218 LINC01599Q8WXQ3 324 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 ARID3AQ99856 593 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 MCOLN1Q9GZU1 580 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 WNT8AQ9H1J5 351 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 DEF6Q9H4E7 631 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 KLK14Q9P0G3 267 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 TUBGCP4Q9UGJ1 667 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 AGAP1Q9UPQ3 857 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 R3HCC1Q9Y3T6 440 aaKnown RBP16.19■□□□□ 0.18
TMEM40-204ENST00000435218 GOLGA6L9A6NEM1 432 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 ARL5CA6NH57 179 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 MEIS3P2A8K0S8 358 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 AKR1B10O60218 316 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 CLTBP09497 229 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 CLCN1P35523 988 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 ASPAP45381 313 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 YWHAEP62258 255 aaKnown RBP16.19■□□□□ 0.18
TMEM40-204ENST00000435218 ARID5AQ03989 594 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 MYO1EQ12965 1108 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 SLC18A3Q16572 532 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 GLRA4Q5JXX5 417 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 ZNF662Q6ZS27 426 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 ZNF571Q7Z3V5 609 aaPredicted RBP16.19■□□□□ 0.18
TMEM40-204ENST00000435218 VPS36Q86VN1 386 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 SEPT8Q92599 483 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 HPDLQ96IR7 371 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 RPS6KC1Q96S38 1066 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 ELAC1Q9H777 363 aaKnown RBP16.19■□□□□ 0.18
TMEM40-204ENST00000435218 RSAD1Q9HA92 442 aa16.19■□□□□ 0.18
TMEM40-204ENST00000435218 PIRO00625 290 aa16.18■□□□□ 0.18
TMEM40-204ENST00000435218 IPO7O95373 1038 aaKnown RBP16.18■□□□□ 0.18
TMEM40-204ENST00000435218 P4HA1P13674 534 aa16.18■□□□□ 0.18
TMEM40-204ENST00000435218 RFC2P35250 354 aa16.18■□□□□ 0.18
TMEM40-204ENST00000435218 PNPLA4P41247 253 aa16.18■□□□□ 0.18
TMEM40-204ENST00000435218 BPIFB4P59827 614 aa16.18■□□□□ 0.18
TMEM40-204ENST00000435218 NAB2Q15742 525 aa16.18■□□□□ 0.18
TMEM40-204ENST00000435218 LRRC26Q2I0M4 334 aa16.18■□□□□ 0.18
TMEM40-204ENST00000435218 WDR72Q3MJ13 1102 aa16.18■□□□□ 0.18
TMEM40-204ENST00000435218 C9orf57Q5W0N0 161 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms