RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 PTPRN2Q92932 1015 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 SLC17A7Q9P2U7 560 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 GGA1Q9UJY5 639 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 MYH11P35749 1972 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 MIF4GDA9UHW6 222 aaKnown RBP11.09□□□□□ -0.63
SCAF4-203ENST00000434667 F5H6K3 240 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 CYP11B1P15538 503 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 GBP1P32455 592 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 ECE1P42892 770 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 MAGEA4P43358 317 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 IL9RQ01113 521 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 ZRSR2Q15696 482 aaKnown RBP11.09□□□□□ -0.63
SCAF4-203ENST00000434667 C11orf91Q3C1V1 193 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 CDC42EP5Q6NZY7 148 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 SLC30A9Q6PML9 568 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 ZNF365Q70YC5 407 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 OTOP1Q7RTM1 612 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 FBXO11Q86XK2 927 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 KBTBD2Q8IY47 623 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 LRRN4Q8WUT4 740 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 RUNDC3BQ96NL0 473 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 HSD17B14Q9BPX1 270 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 OCEL1Q9H607 264 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.09□□□□□ -0.637e-6■■■□□ 16.5
SCAF4-203ENST00000434667 NARFQ9UHQ1 456 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 USP1O94782 785 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 SP100P23497 879 aaPredicted RBP11.09□□□□□ -0.63
SCAF4-203ENST00000434667 SMARCA1P28370 1054 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 SSTR1P30872 391 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 STRN3Q13033 797 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 BMT2Q1RMZ1 405 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 C11orf63Q6NUN7 778 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 ZBED8Q8IZ13 594 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 PPP1R14CQ8TAE6 165 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 LXNQ9BS40 222 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 CDCA7Q9BWT1 371 aaPredicted RBP11.09□□□□□ -0.63
SCAF4-203ENST00000434667 CADM1Q9BY67 442 aaKnown RBP11.09□□□□□ -0.63
SCAF4-203ENST00000434667 DCLK3Q9C098 648 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 UNC45AQ9H3U1 944 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 ZFP69BQ9UJL9 534 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.09□□□□□ -0.63
SCAF4-203ENST00000434667 PAPPA2Q9BXP8 1791 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 GAS7O60861 476 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 ASMTLO95671 621 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 HARSP12081 509 aaKnown RBP11.09□□□□□ -0.63
SCAF4-203ENST00000434667 KRT4P19013 534 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 PAPOLAP51003 745 aaKnown RBP11.09□□□□□ -0.63
SCAF4-203ENST00000434667 RAB27AP51159 221 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 ACSBG2Q5FVE4 666 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 HHATQ5VTY9 493 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 FOXR2Q6PJQ5 311 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 NLRP9Q7RTR0 991 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 CCDC125Q86Z20 511 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 PPFIBP2Q8ND30 876 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 GBP5Q96PP8 586 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 C11orf70Q9BRQ4 267 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 TMEM109Q9BVC6 243 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 NYXQ9GZU5 481 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 WNT8AQ9H1J5 351 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 KANSL3Q9P2N6 904 aa11.09□□□□□ -0.63
SCAF4-203ENST00000434667 IRF6O14896 467 aa11.08□□□□□ -0.64
SCAF4-203ENST00000434667 ATP9AO75110 1047 aa11.08□□□□□ -0.64
SCAF4-203ENST00000434667 SNUPNO95149 360 aaKnown RBP11.08□□□□□ -0.64
SCAF4-203ENST00000434667 MXI1P50539 228 aa11.08□□□□□ -0.64
SCAF4-203ENST00000434667 IRX4P78413 519 aa11.08□□□□□ -0.64
SCAF4-203ENST00000434667 ALCAMQ13740 583 aa11.08□□□□□ -0.64
SCAF4-203ENST00000434667 TMEM132AQ24JP5 1023 aa11.08□□□□□ -0.64
SCAF4-203ENST00000434667 SYDE2Q5VT97 1194 aa11.08□□□□□ -0.64
SCAF4-203ENST00000434667 TXNRD3NBQ6F5E7 133 aa11.08□□□□□ -0.64
SCAF4-203ENST00000434667 LRRC8CQ8TDW0 803 aa11.08□□□□□ -0.64
SCAF4-203ENST00000434667 SCG3Q8WXD2 468 aaKnown RBP11.08□□□□□ -0.64
SCAF4-203ENST00000434667 SH3GL3Q99963 347 aa11.08□□□□□ -0.64
SCAF4-203ENST00000434667 HOMER2Q9NSB8 354 aa11.08□□□□□ -0.64
SCAF4-203ENST00000434667 DIS3Q9Y2L1 958 aaKnown RBP11.08□□□□□ -0.64
SCAF4-203ENST00000434667 CENPFP49454 3210 aa11.08□□□□□ -0.64
SCAF4-203ENST00000434667 GTPBP10A4D1E9 387 aaKnown RBP11.08□□□□□ -0.64
SCAF4-203ENST00000434667 CAPN9O14815 690 aa11.08□□□□□ -0.64
SCAF4-203ENST00000434667 NDUFB10O96000 172 aa11.08□□□□□ -0.64
SCAF4-203ENST00000434667 PECAM1P16284 738 aaPredicted RBP11.08□□□□□ -0.64
SCAF4-203ENST00000434667 ADRA2BP18089 450 aa11.08□□□□□ -0.64
SCAF4-203ENST00000434667 AMPD1P23109 780 aa11.08□□□□□ -0.64
SCAF4-203ENST00000434667 NT5C2P49902 561 aa11.08□□□□□ -0.64
SCAF4-203ENST00000434667 GPATCH4Q5T3I0 446 aaKnown RBP11.08□□□□□ -0.64
SCAF4-203ENST00000434667 SNX30Q5VWJ9 437 aa11.08□□□□□ -0.64
SCAF4-203ENST00000434667 RNF43Q68DV7 783 aa11.08□□□□□ -0.64
SCAF4-203ENST00000434667 CYFIP1Q7L576 1253 aa11.08□□□□□ -0.64
SCAF4-203ENST00000434667 GBP7Q8N8V2 638 aaPredicted RBP11.08□□□□□ -0.64
SCAF4-203ENST00000434667 CFAP61Q8NHU2 1237 aa11.08□□□□□ -0.64
SCAF4-203ENST00000434667 CRYGNQ8WXF5 182 aa11.08□□□□□ -0.64
SCAF4-203ENST00000434667 MAML1Q92585 1016 aa11.08□□□□□ -0.64
SCAF4-203ENST00000434667 AMNQ9BXJ7 453 aa11.08□□□□□ -0.64
SCAF4-203ENST00000434667 ROPN1BQ9BZX4 212 aaPredicted RBP11.08□□□□□ -0.64
SCAF4-203ENST00000434667 ROPN1Q9HAT0 212 aaPredicted RBP11.08□□□□□ -0.64
SCAF4-203ENST00000434667 TXLNGQ9NUQ3 528 aa11.08□□□□□ -0.64
SCAF4-203ENST00000434667 HSPBP1Q9NZL4 362 aa11.08□□□□□ -0.64
SCAF4-203ENST00000434667 DNPEPQ9ULA0 475 aa11.08□□□□□ -0.64
SCAF4-203ENST00000434667 SCN9AQ15858 1988 aa11.08□□□□□ -0.64
SCAF4-203ENST00000434667 ARHGEF35A5YM69 484 aa11.08□□□□□ -0.64
SCAF4-203ENST00000434667 TBX10O75333 385 aa11.08□□□□□ -0.64
SCAF4-203ENST00000434667 PEX3P56589 373 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 167.5 ms