RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 FAM98CQ17RN3 349 aaKnown RBP3.98□□□□□ -1.77
SHPRH-205ENST00000433355 GSTA5Q7RTV2 222 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 ARPINQ7Z6K5 226 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 SDCCAG8Q86SQ7 713 aaPredicted RBP3.98□□□□□ -1.77
SHPRH-205ENST00000433355 TRIM50Q86XT4 487 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 ADGRF4Q8IZF3 695 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 CDH19Q9H159 772 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 BFARQ9NZS9 450 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 PAK5Q9P286 719 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.98□□□□□ -1.77
SHPRH-205ENST00000433355 RXRBP28702 533 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 SNX17Q15036 470 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 AASDHQ4L235 1098 aaPredicted RBP3.98□□□□□ -1.77
SHPRH-205ENST00000433355 SWT1Q5T5J6 900 aaKnown RBP3.98□□□□□ -1.77
SHPRH-205ENST00000433355 DPH6Q7L8W6 267 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 GPR65Q8IYL9 337 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 LHX5Q9H2C1 402 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 PDP2Q9P2J9 529 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 HPCAL4Q9UM19 191 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 Q9Y3F1 56 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 ACADSP16219 412 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 KIAA1755Q5JYT7 1200 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 VPS52Q8N1B4 723 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 RASGEF1CQ8N431 466 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 ZNF280CQ8ND82 737 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 DLG3Q92796 817 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 HES6Q96HZ4 224 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 ACAP3Q96P50 834 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 APOBEC2Q9Y235 224 aaKnown RBP3.98□□□□□ -1.77
SHPRH-205ENST00000433355 K7ERI5 159 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 DNAJA2O60884 412 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 DNAJC8O75937 253 aaPredicted RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 NDUFB10O96000 172 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 CETPP11597 493 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 CAP2P40123 477 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 NFX1Q12986 1120 aaKnown RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 SAMD1Q6SPF0 538 aaPredicted RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 METTL7BQ6UX53 244 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 PRR23BQ6ZRT6 265 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 ERO1BQ86YB8 467 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 PASD1Q8IV76 773 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 TMCO5AQ8N6Q1 288 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 ETNPPLQ8TBG4 499 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 HHATLQ9HCP6 504 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 PDE11AQ9HCR9 933 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 PNPLA8Q9NP80 782 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 DPP7Q9UHL4 492 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 PTCH2Q9Y6C5 1203 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 POTECB2RU33 542 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 APOC4-APOC2K7ER74 178 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 APOC2P02655 101 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 ZNF280AP59817 542 aaPredicted RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 SNAPC2Q13487 334 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 HLFQ16534 295 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 XKR9Q5GH70 373 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 KYAT3Q6YP21 454 aaKnown RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 C7orf57Q8NEG2 295 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 ATP8B4Q8TF62 1192 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 POMGNT1Q8WZA1 660 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 CELF1Q92879 486 aaKnown RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 ZNF653Q96CK0 615 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 TBX20Q9UMR3 447 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 MYO16Q9Y6X6 1858 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 SHROOM3Q8TF72 1996 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 SPAG17Q6Q759 2223 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 SOBPA7XYQ1 873 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 WFS1O76024 890 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 PRDX5P30044 214 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 PRCPP42785 496 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 SLC45A4Q5BKX6 768 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 STARD8Q92502 1023 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 FBXL18Q96ME1 805 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 KRT12Q99456 494 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 ZNF670Q9BS34 389 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 GPBP1L1Q9HC44 474 aaPredicted RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 NOP53Q9NZM5 478 aaKnown RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 SLC12A6Q9UHW9 1150 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 CACNA1EQ15878 2313 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 RSBN1LQ6PCB5 846 aaPredicted RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 BEND5Q7L4P6 421 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 DNAJB7Q7Z6W7 309 aaPredicted RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 SCYL3Q8IZE3 742 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 TEKT4Q8WW24 435 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 RSAD2Q8WXG1 361 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 GPKOWQ92917 476 aaPredicted RBP eCLIP3.97□□□□□ -1.772e-8■■■■■ 52.2
SHPRH-205ENST00000433355 NKD2Q969F2 451 aaPredicted RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 FAM167BQ9BTA0 163 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 SNX25Q9H3E2 840 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 RAD18Q9NS91 495 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 TESPA1A2RU30 521 aaPredicted RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 KLHL33A6NCF5 533 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 A8MXQ7 604 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 TRDMT1O14717 391 aaKnown RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 HGSO14964 777 aaPredicted RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 ZBTB48P10074 688 aaPredicted RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 TNNI1P19237 187 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 CLK2P49760 499 aaKnown RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 CDC16Q13042 620 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 PRMT9Q6P2P2 845 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms