RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 RINT1Q6NUQ1 792 aa16.27■□□□□ 0.2
PRKDC-203ENST00000432581 C1orf186Q6ZWK4 172 aa16.27■□□□□ 0.2
PRKDC-203ENST00000432581 NELL1Q92832 810 aa16.27■□□□□ 0.2
PRKDC-203ENST00000432581 TCEAL4Q96EI5 215 aa16.27■□□□□ 0.2
PRKDC-203ENST00000432581 ASB16Q96NS5 453 aa16.27■□□□□ 0.2
PRKDC-203ENST00000432581 NTPCRQ9BSD7 190 aaKnown RBP16.27■□□□□ 0.2
PRKDC-203ENST00000432581 IER2Q9BTL4 223 aa16.27■□□□□ 0.2
PRKDC-203ENST00000432581 RUSC1Q9BVN2 902 aa16.27■□□□□ 0.2
PRKDC-203ENST00000432581 TRMT61BQ9BVS5 477 aaKnown RBP16.27■□□□□ 0.2
PRKDC-203ENST00000432581 FAM126AQ9BYI3 521 aaPredicted RBP16.27■□□□□ 0.2
PRKDC-203ENST00000432581 EPC1Q9H2F5 836 aa16.27■□□□□ 0.2
PRKDC-203ENST00000432581 PRMT8Q9NR22 394 aaPredicted RBP16.27■□□□□ 0.2
PRKDC-203ENST00000432581 SH2B1Q9NRF2 756 aaPredicted RBP16.27■□□□□ 0.2
PRKDC-203ENST00000432581 DLL3Q9NYJ7 618 aa16.27■□□□□ 0.2
PRKDC-203ENST00000432581 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.27■□□□□ 0.2
PRKDC-203ENST00000432581 NCOR2Q9Y618 2525 aa16.26■□□□□ 0.19
PRKDC-203ENST00000432581 TOM1L1O75674 476 aa16.26■□□□□ 0.19
PRKDC-203ENST00000432581 HARSP12081 509 aaKnown RBP16.26■□□□□ 0.19
PRKDC-203ENST00000432581 SDHBP21912 280 aa16.26■□□□□ 0.19
PRKDC-203ENST00000432581 GUCY2CP25092 1073 aa16.26■□□□□ 0.19
PRKDC-203ENST00000432581 PRPHP41219 470 aa16.26■□□□□ 0.19
PRKDC-203ENST00000432581 SMTNP53814 917 aa16.26■□□□□ 0.19
PRKDC-203ENST00000432581 STRN3Q13033 797 aa16.26■□□□□ 0.19
PRKDC-203ENST00000432581 MAPK7Q13164 816 aa16.26■□□□□ 0.19
PRKDC-203ENST00000432581 NOLC1Q14978 699 aaKnown RBP eCLIP16.26■□□□□ 0.19
PRKDC-203ENST00000432581 POTEHQ6S545 545 aa16.26■□□□□ 0.19
PRKDC-203ENST00000432581 SPIRE2Q8WWL2 714 aa16.26■□□□□ 0.19
PRKDC-203ENST00000432581 DDX12PQ92771 950 aa16.26■□□□□ 0.19
PRKDC-203ENST00000432581 SMARCD2Q92925 531 aa16.26■□□□□ 0.19
PRKDC-203ENST00000432581 IRF7Q92985 503 aa16.26■□□□□ 0.19
PRKDC-203ENST00000432581 C18orf25Q96B23 403 aaPredicted RBP16.26■□□□□ 0.19
PRKDC-203ENST00000432581 ZNF512Q96ME7 567 aaPredicted RBP16.26■□□□□ 0.19
PRKDC-203ENST00000432581 TRPV5Q9NQA5 729 aa16.26■□□□□ 0.19
PRKDC-203ENST00000432581 SMG5Q9UPR3 1016 aaKnown RBP16.26■□□□□ 0.19
PRKDC-203ENST00000432581 PCDHB6Q9Y5E3 794 aa16.26■□□□□ 0.19
PRKDC-203ENST00000432581 FANCMQ8IYD8 2048 aa16.26■□□□□ 0.19
PRKDC-203ENST00000432581 NOTCH4Q99466 2003 aa16.26■□□□□ 0.19
PRKDC-203ENST00000432581 DMXL1Q9Y485 3027 aa16.25■□□□□ 0.19
PRKDC-203ENST00000432581 COL4A3Q01955 1670 aa16.25■□□□□ 0.19
PRKDC-203ENST00000432581 MED19A0JLT2 244 aaPredicted RBP16.25■□□□□ 0.19
PRKDC-203ENST00000432581 SLC16A4O15374 487 aa16.25■□□□□ 0.19
PRKDC-203ENST00000432581 LILRB5O75023 590 aa16.25■□□□□ 0.19
PRKDC-203ENST00000432581 PSMC3P17980 439 aa16.25■□□□□ 0.19
PRKDC-203ENST00000432581 MARCKSP29966 332 aaPredicted RBP16.25■□□□□ 0.19
PRKDC-203ENST00000432581 CCR2P41597 374 aa16.25■□□□□ 0.19
PRKDC-203ENST00000432581 TOB1P50616 345 aaPredicted RBP16.25■□□□□ 0.19
PRKDC-203ENST00000432581 FZD5Q13467 585 aa16.25■□□□□ 0.19
PRKDC-203ENST00000432581 GRM2Q14416 872 aa16.25■□□□□ 0.19
PRKDC-203ENST00000432581 PPP2R5DQ14738 602 aa16.25■□□□□ 0.19
PRKDC-203ENST00000432581 ZPBP2Q6X784 338 aa16.25■□□□□ 0.19
PRKDC-203ENST00000432581 DTHD1Q6ZMT9 781 aa16.25■□□□□ 0.19
PRKDC-203ENST00000432581 MAMSTRQ6ZN01 415 aa16.25■□□□□ 0.19
PRKDC-203ENST00000432581 KCTD17Q8N5Z5 321 aa16.25■□□□□ 0.19
PRKDC-203ENST00000432581 DEPDC1BQ8WUY9 529 aa16.25■□□□□ 0.19
PRKDC-203ENST00000432581 TBC1D32Q96NH3 1257 aa16.25■□□□□ 0.19
PRKDC-203ENST00000432581 OXCT2Q9BYC2 517 aaPredicted RBP16.25■□□□□ 0.19
PRKDC-203ENST00000432581 PLEKHA5Q9HAU0 1116 aa16.25■□□□□ 0.19
PRKDC-203ENST00000432581 ASAH2Q9NR71 780 aa16.25■□□□□ 0.19
PRKDC-203ENST00000432581 PPP4R2Q9NY27 417 aa16.25■□□□□ 0.19
PRKDC-203ENST00000432581 ANKFY1Q9P2R3 1169 aa16.25■□□□□ 0.19
PRKDC-203ENST00000432581 PCDHB8Q9UN66 801 aa16.25■□□□□ 0.19
PRKDC-203ENST00000432581 MIA3Q5JRA6 1907 aa16.25■□□□□ 0.19
PRKDC-203ENST00000432581 SHISA7A6NL88 538 aa16.24■□□□□ 0.19
PRKDC-203ENST00000432581 PP2D1A8MPX8 630 aa16.24■□□□□ 0.19
PRKDC-203ENST00000432581 MEFVO15553 781 aaPredicted RBP16.24■□□□□ 0.19
PRKDC-203ENST00000432581 PLS3P13797 630 aa16.24■□□□□ 0.19
PRKDC-203ENST00000432581 CPB1P15086 417 aa16.24■□□□□ 0.19
PRKDC-203ENST00000432581 EPHA5P54756 1037 aa16.24■□□□□ 0.19
PRKDC-203ENST00000432581 NRLP54845 237 aa16.24■□□□□ 0.19
PRKDC-203ENST00000432581 MCL1Q07820 350 aa16.24■□□□□ 0.19
PRKDC-203ENST00000432581 TWF1Q12792 350 aa16.24■□□□□ 0.19
PRKDC-203ENST00000432581 MTAPQ13126 283 aa16.24■□□□□ 0.19
PRKDC-203ENST00000432581 RSPO4Q2I0M5 234 aaPredicted RBP16.24■□□□□ 0.19
PRKDC-203ENST00000432581 SLC10A6Q3KNW5 377 aa16.24■□□□□ 0.19
PRKDC-203ENST00000432581 MAP4K3Q8IVH8 894 aa16.24■□□□□ 0.19
PRKDC-203ENST00000432581 ZNF687Q8N1G0 1237 aa16.24■□□□□ 0.19
PRKDC-203ENST00000432581 TMEM161BQ8NDZ6 487 aa16.24■□□□□ 0.19
PRKDC-203ENST00000432581 ZBTB45Q96K62 511 aaPredicted RBP16.24■□□□□ 0.19
PRKDC-203ENST00000432581 GPR88Q9GZN0 384 aa16.24■□□□□ 0.19
PRKDC-203ENST00000432581 CHRDQ9H2X0 955 aa16.24■□□□□ 0.19
PRKDC-203ENST00000432581 TRPV4Q9HBA0 871 aa16.24■□□□□ 0.19
PRKDC-203ENST00000432581 ZNF334Q9HCZ1 680 aaPredicted RBP16.24■□□□□ 0.19
PRKDC-203ENST00000432581 CEP72Q9P209 647 aa16.24■□□□□ 0.19
PRKDC-203ENST00000432581 NDRG2Q9UN36 371 aaKnown RBP16.24■□□□□ 0.19
PRKDC-203ENST00000432581 F5P12259 2224 aa16.24■□□□□ 0.19
PRKDC-203ENST00000432581 FRYLO94915 3013 aa16.24■□□□□ 0.19
PRKDC-203ENST00000432581 SFI1A8K8P3 1242 aa16.23■□□□□ 0.19
PRKDC-203ENST00000432581 CLDN3O15551 220 aa16.23■□□□□ 0.19
PRKDC-203ENST00000432581 MAPTP10636 758 aaKnown RBP16.23■□□□□ 0.19
PRKDC-203ENST00000432581 CDC25AP30304 524 aa16.23■□□□□ 0.19
PRKDC-203ENST00000432581 GDI1P31150 447 aa16.23■□□□□ 0.19
PRKDC-203ENST00000432581 YWHAHQ04917 246 aaPredicted RBP16.23■□□□□ 0.19
PRKDC-203ENST00000432581 PLD1Q13393 1074 aa16.23■□□□□ 0.19
PRKDC-203ENST00000432581 IL17AQ16552 155 aa16.23■□□□□ 0.19
PRKDC-203ENST00000432581 TSSK4Q6SA08 328 aa16.23■□□□□ 0.19
PRKDC-203ENST00000432581 VITQ6UXI7 678 aa16.23■□□□□ 0.19
PRKDC-203ENST00000432581 KCNK18Q7Z418 384 aa16.23■□□□□ 0.19
PRKDC-203ENST00000432581 HS6ST3Q8IZP7 471 aa16.23■□□□□ 0.19
PRKDC-203ENST00000432581 ZSCAN18Q8TBC5 510 aaPredicted RBP16.23■□□□□ 0.19
PRKDC-203ENST00000432581 FAM3CQ92520 227 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms