RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 TNKSO95271 1327 aa4.45□□□□□ -1.7
CLK1-204ENST00000432425 NUDT3O95989 172 aa4.45□□□□□ -1.7
CLK1-204ENST00000432425 CD1AP06126 327 aa4.45□□□□□ -1.7
CLK1-204ENST00000432425 SEC24CP53992 1094 aa4.45□□□□□ -1.7
CLK1-204ENST00000432425 ADKP55263 362 aaKnown RBP4.45□□□□□ -1.7
CLK1-204ENST00000432425 NANOS3P60323 173 aaKnown RBP4.45□□□□□ -1.7
CLK1-204ENST00000432425 GPR149Q86SP6 731 aa4.45□□□□□ -1.7
CLK1-204ENST00000432425 COLGALT2Q8IYK4 626 aa4.45□□□□□ -1.7
CLK1-204ENST00000432425 SLC44A3Q8N4M1 653 aa4.45□□□□□ -1.7
CLK1-204ENST00000432425 LINC00476Q8WZB0 136 aa4.45□□□□□ -1.7
CLK1-204ENST00000432425 KAT5Q92993 513 aa4.45□□□□□ -1.7
CLK1-204ENST00000432425 CRAMP1Q96RY5 1269 aa4.45□□□□□ -1.7
CLK1-204ENST00000432425 ASPSCR1Q9BZE9 553 aa4.45□□□□□ -1.7
CLK1-204ENST00000432425 CASS4Q9NQ75 786 aa4.45□□□□□ -1.7
CLK1-204ENST00000432425 MAN1C1Q9NR34 630 aa4.45□□□□□ -1.7
CLK1-204ENST00000432425 TMEM74BQ9NUR3 256 aa4.45□□□□□ -1.7
CLK1-204ENST00000432425 CALCOCO1Q9P1Z2 691 aa4.45□□□□□ -1.7
CLK1-204ENST00000432425 ZNHIT2Q9UHR6 403 aa4.45□□□□□ -1.7
CLK1-204ENST00000432425 CCDC78A2IDD5 438 aa4.45□□□□□ -1.7
CLK1-204ENST00000432425 EDNRBP24530 442 aa4.45□□□□□ -1.7
CLK1-204ENST00000432425 SLFN5Q08AF3 891 aa4.45□□□□□ -1.7
CLK1-204ENST00000432425 MPP3Q13368 585 aa4.45□□□□□ -1.7
CLK1-204ENST00000432425 PTPROQ16827 1216 aa4.45□□□□□ -1.7
CLK1-204ENST00000432425 ERCC6LQ2NKX8 1250 aa4.45□□□□□ -1.7
CLK1-204ENST00000432425 MIER2Q8N344 545 aa4.45□□□□□ -1.7
CLK1-204ENST00000432425 AOPEPQ8N6M6 819 aa4.45□□□□□ -1.7
CLK1-204ENST00000432425 EPN1Q9Y6I3 576 aaPredicted RBP4.45□□□□□ -1.7
CLK1-204ENST00000432425 AGFG2O95081 481 aa4.44□□□□□ -1.7
CLK1-204ENST00000432425 SNUPNO95149 360 aaKnown RBP4.44□□□□□ -1.7
CLK1-204ENST00000432425 FCER1AP12319 257 aa4.44□□□□□ -1.7
CLK1-204ENST00000432425 ZNF280AP59817 542 aaPredicted RBP4.44□□□□□ -1.7
CLK1-204ENST00000432425 TLE1Q04724 770 aa4.44□□□□□ -1.7
CLK1-204ENST00000432425 ODF1Q14990 250 aa4.44□□□□□ -1.7
CLK1-204ENST00000432425 CYP2A13Q16696 494 aa4.44□□□□□ -1.7
CLK1-204ENST00000432425 UTP14CQ5TAP6 766 aaKnown RBP4.44□□□□□ -1.7
CLK1-204ENST00000432425 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.44□□□□□ -1.7
CLK1-204ENST00000432425 TTC7BQ86TV6 843 aa4.44□□□□□ -1.7
CLK1-204ENST00000432425 IL17RDQ8NFM7 739 aa4.44□□□□□ -1.7
CLK1-204ENST00000432425 MRGPRX4Q96LA9 322 aa4.44□□□□□ -1.7
CLK1-204ENST00000432425 Q96MF0 132 aa4.44□□□□□ -1.7
CLK1-204ENST00000432425 BRINP2Q9C0B6 783 aa4.44□□□□□ -1.7
CLK1-204ENST00000432425 RIOX1Q9H6W3 641 aa4.44□□□□□ -1.7
CLK1-204ENST00000432425 JKAMPQ9P055 326 aa4.44□□□□□ -1.7
CLK1-204ENST00000432425 HSFX1Q9UBD0 423 aa4.44□□□□□ -1.7
CLK1-204ENST00000432425 SERPINB13Q9UIV8 391 aa4.44□□□□□ -1.7
CLK1-204ENST00000432425 DMTF1Q9Y222 760 aa4.44□□□□□ -1.7
CLK1-204ENST00000432425 CDYLQ9Y232 598 aa4.44□□□□□ -1.7
CLK1-204ENST00000432425 TRGV11A0A075B6L2 103 aa4.43□□□□□ -1.7
CLK1-204ENST00000432425 ANKRD62A6NC57 917 aa4.43□□□□□ -1.7
CLK1-204ENST00000432425 MYADML2A6NDP7 307 aa4.43□□□□□ -1.7
CLK1-204ENST00000432425 DTNBO60941 627 aa4.43□□□□□ -1.7
CLK1-204ENST00000432425 ESRRBO95718 433 aa4.43□□□□□ -1.7
CLK1-204ENST00000432425 SBK3P0C264 359 aa4.43□□□□□ -1.7
CLK1-204ENST00000432425 SLC6A4P31645 630 aa4.43□□□□□ -1.7
CLK1-204ENST00000432425 ADRA1BP35368 520 aa4.43□□□□□ -1.7
CLK1-204ENST00000432425 RECQLP46063 649 aaPredicted RBP4.43□□□□□ -1.7
CLK1-204ENST00000432425 VAV2P52735 878 aa4.43□□□□□ -1.7
CLK1-204ENST00000432425 ZNF844Q08AG5 666 aa4.43□□□□□ -1.7
CLK1-204ENST00000432425 SCAPQ12770 1279 aa4.43□□□□□ -1.7
CLK1-204ENST00000432425 STRIP1Q5VSL9 837 aa4.43□□□□□ -1.7
CLK1-204ENST00000432425 OLFML1Q6UWY5 402 aa4.43□□□□□ -1.7
CLK1-204ENST00000432425 SLC9A6Q92581 669 aa4.43□□□□□ -1.7
CLK1-204ENST00000432425 FUBP1Q96AE4 644 aaKnown RBP4.43□□□□□ -1.7
CLK1-204ENST00000432425 NACC2Q96BF6 587 aa4.43□□□□□ -1.7
CLK1-204ENST00000432425 PTCD3Q96EY7 689 aaKnown RBP4.43□□□□□ -1.7
CLK1-204ENST00000432425 UNKLQ9H9P5 680 aaKnown RBP4.43□□□□□ -1.7
CLK1-204ENST00000432425 PCDHB1Q9Y5F3 818 aa4.43□□□□□ -1.7
CLK1-204ENST00000432425 MAST3O60307 1309 aa4.42□□□□□ -1.7
CLK1-204ENST00000432425 ZAR1LA6NP61 321 aa4.42□□□□□ -1.7
CLK1-204ENST00000432425 SLC43A1O75387 559 aa4.42□□□□□ -1.7
CLK1-204ENST00000432425 CXCR5P32302 372 aa4.42□□□□□ -1.7
CLK1-204ENST00000432425 FOXI1Q12951 378 aa4.42□□□□□ -1.7
CLK1-204ENST00000432425 GEN1Q17RS7 908 aa4.42□□□□□ -1.7
CLK1-204ENST00000432425 ZNF365Q70YC5 407 aa4.42□□□□□ -1.7
CLK1-204ENST00000432425 NSUN6Q8TEA1 469 aaKnown RBP4.42□□□□□ -1.7
CLK1-204ENST00000432425 TLR10Q9BXR5 811 aa4.42□□□□□ -1.7
CLK1-204ENST00000432425 SMARCA1P28370 1054 aa4.41□□□□□ -1.7
CLK1-204ENST00000432425 RGS19P49795 217 aa4.41□□□□□ -1.7
CLK1-204ENST00000432425 KHDC1Q4VXA5 237 aaKnown RBP4.41□□□□□ -1.7
CLK1-204ENST00000432425 BRDTQ58F21 947 aaPredicted RBP4.41□□□□□ -1.7
CLK1-204ENST00000432425 Q6ZNX1 250 aa4.41□□□□□ -1.7
CLK1-204ENST00000432425 CLNKQ7Z7G1 428 aa4.41□□□□□ -1.7
CLK1-204ENST00000432425 ZBTB46Q86UZ6 589 aa4.41□□□□□ -1.7
CLK1-204ENST00000432425 VRK1Q99986 396 aaPredicted RBP4.41□□□□□ -1.7
CLK1-204ENST00000432425 AIFM2Q9BRQ8 373 aa4.41□□□□□ -1.7
CLK1-204ENST00000432425 IMPG2Q9BZV3 1241 aa4.41□□□□□ -1.7
CLK1-204ENST00000432425 GNL3LQ9NVN8 582 aaKnown RBP4.41□□□□□ -1.7
CLK1-204ENST00000432425 LRIT1Q9P2V4 623 aa4.41□□□□□ -1.7
CLK1-204ENST00000432425 POLHQ9Y253 713 aa4.41□□□□□ -1.7
CLK1-204ENST00000432425 NOP58Q9Y2X3 529 aaKnown RBP4.41□□□□□ -1.7
CLK1-204ENST00000432425 NEU2Q9Y3R4 380 aa4.41□□□□□ -1.7
CLK1-204ENST00000432425 KIAA0355O15063 1070 aa4.41□□□□□ -1.7
CLK1-204ENST00000432425 ZRANB2O95218 330 aaKnown RBP eCLIP4.41□□□□□ -1.7
CLK1-204ENST00000432425 ARIH2O95376 493 aa4.41□□□□□ -1.7
CLK1-204ENST00000432425 GNAI3P08754 354 aa4.41□□□□□ -1.7
CLK1-204ENST00000432425 KCNA2P16389 499 aa4.41□□□□□ -1.7
CLK1-204ENST00000432425 TYRP1P17643 537 aa4.41□□□□□ -1.7
CLK1-204ENST00000432425 MALP21145 153 aa4.41□□□□□ -1.7
CLK1-204ENST00000432425 PLA2G5P39877 138 aa4.41□□□□□ -1.7
CLK1-204ENST00000432425 MPLP40238 635 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms