RNA–Protein interactions for RNA: ENST00000431716.2

CDRT15-202, CMT1A duplicated region transcript 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDRT15, Length 655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT15-202ENST00000431716 TRAPPC3O43617 180 aa16.34■□□□□ 0.21
CDRT15-202ENST00000431716 TADA2AO75478 443 aa16.34■□□□□ 0.21
CDRT15-202ENST00000431716 FGF18O76093 207 aa16.34■□□□□ 0.21
CDRT15-202ENST00000431716 B3GAT3O94766 335 aa16.34■□□□□ 0.21
CDRT15-202ENST00000431716 PBX3P40426 434 aa16.34■□□□□ 0.21
CDRT15-202ENST00000431716 DLG4P78352 724 aa16.34■□□□□ 0.21
CDRT15-202ENST00000431716 RBP5P82980 135 aa16.34■□□□□ 0.21
CDRT15-202ENST00000431716 UBE3AQ05086 875 aa16.34■□□□□ 0.21
CDRT15-202ENST00000431716 C9orf57Q5W0N0 161 aa16.34■□□□□ 0.21
CDRT15-202ENST00000431716 LMBRD2Q68DH5 695 aaPredicted RBP16.34■□□□□ 0.21
CDRT15-202ENST00000431716 TRAPPC11Q7Z392 1133 aa16.34■□□□□ 0.21
CDRT15-202ENST00000431716 C1orf127Q8N9H9 656 aa16.34■□□□□ 0.21
CDRT15-202ENST00000431716 ATXN2LQ8WWM7 1075 aaKnown RBP16.34■□□□□ 0.21
CDRT15-202ENST00000431716 ZNF516Q92618 1163 aa16.34■□□□□ 0.21
CDRT15-202ENST00000431716 PAAF1Q9BRP4 392 aa16.34■□□□□ 0.21
CDRT15-202ENST00000431716 ANP32EQ9BTT0 268 aa16.34■□□□□ 0.21
CDRT15-202ENST00000431716 MTMR12Q9C0I1 747 aa16.34■□□□□ 0.21
CDRT15-202ENST00000431716 MAGEC2Q9UBF1 373 aaPredicted RBP16.34■□□□□ 0.21
CDRT15-202ENST00000431716 ADAM28Q9UKQ2 775 aa16.34■□□□□ 0.21
CDRT15-202ENST00000431716 LZTS1Q9Y250 596 aa16.34■□□□□ 0.21
CDRT15-202ENST00000431716 PTPRJQ12913 1337 aa16.34■□□□□ 0.21
CDRT15-202ENST00000431716 KIAA1671Q9BY89 1806 aa16.33■□□□□ 0.21
CDRT15-202ENST00000431716 CHD9Q3L8U1 2897 aa16.33■□□□□ 0.21
CDRT15-202ENST00000431716 PHACTR2O75167 634 aa16.33■□□□□ 0.2
CDRT15-202ENST00000431716 PNPLA4P41247 253 aa16.33■□□□□ 0.2
CDRT15-202ENST00000431716 GUCY2FP51841 1108 aa16.33■□□□□ 0.2
CDRT15-202ENST00000431716 MRPS5P82675 430 aaKnown RBP16.33■□□□□ 0.2
CDRT15-202ENST00000431716 ELAVL2Q12926 359 aaKnown RBP16.33■□□□□ 0.2
CDRT15-202ENST00000431716 TIGD5Q53EQ6 642 aa16.33■□□□□ 0.2
CDRT15-202ENST00000431716 C1orf220Q5T0J3 134 aa16.33■□□□□ 0.2
CDRT15-202ENST00000431716 TCERG1LQ5VWI1 586 aa16.33■□□□□ 0.2
CDRT15-202ENST00000431716 LRSAM1Q6UWE0 723 aa16.33■□□□□ 0.2
CDRT15-202ENST00000431716 DDX53Q86TM3 631 aaKnown RBP16.33■□□□□ 0.2
CDRT15-202ENST00000431716 IRF2BP1Q8IU81 584 aa16.33■□□□□ 0.2
CDRT15-202ENST00000431716 TRIM59Q8IWR1 403 aa16.33■□□□□ 0.2
CDRT15-202ENST00000431716 RABGGTAQ92696 567 aa16.33■□□□□ 0.2
CDRT15-202ENST00000431716 CNOT6LQ96LI5 555 aaKnown RBP16.33■□□□□ 0.2
CDRT15-202ENST00000431716 LMAN2LQ9H0V9 348 aa16.33■□□□□ 0.2
CDRT15-202ENST00000431716 ALG13Q9NP73 1137 aaKnown RBP16.33■□□□□ 0.2
CDRT15-202ENST00000431716 MARCH5Q9NX47 278 aa16.33■□□□□ 0.2
CDRT15-202ENST00000431716 CACNG4Q9UBN1 327 aa16.33■□□□□ 0.2
CDRT15-202ENST00000431716 NUB1Q9Y5A7 615 aa16.33■□□□□ 0.2
CDRT15-202ENST00000431716 GRM6O15303 877 aa16.32■□□□□ 0.2
CDRT15-202ENST00000431716 CSPG5O95196 566 aa16.32■□□□□ 0.2
CDRT15-202ENST00000431716 KIF4AO95239 1232 aa16.32■□□□□ 0.2
CDRT15-202ENST00000431716 C4BPAP04003 597 aaKnown RBP16.32■□□□□ 0.2
CDRT15-202ENST00000431716 ITGB3P05106 788 aa16.32■□□□□ 0.2
CDRT15-202ENST00000431716 ITGB1P05556 798 aa16.32■□□□□ 0.2
CDRT15-202ENST00000431716 KRT19P08727 400 aa16.32■□□□□ 0.2
CDRT15-202ENST00000431716 TRIM49P0CI25 452 aa16.32■□□□□ 0.2
CDRT15-202ENST00000431716 TRIM49CP0CI26 452 aa16.32■□□□□ 0.2
CDRT15-202ENST00000431716 EEF1GP26641 437 aaKnown RBP16.32■□□□□ 0.2
CDRT15-202ENST00000431716 MYO1EQ12965 1108 aa16.32■□□□□ 0.2
CDRT15-202ENST00000431716 BIRC3Q13489 604 aa16.32■□□□□ 0.2
CDRT15-202ENST00000431716 TRPC3Q13507 836 aa16.32■□□□□ 0.2
CDRT15-202ENST00000431716 AAK1Q2M2I8 961 aa16.32■□□□□ 0.2
CDRT15-202ENST00000431716 ZACNQ401N2 412 aa16.32■□□□□ 0.2
CDRT15-202ENST00000431716 DCAF17Q5H9S7 520 aaPredicted RBP16.32■□□□□ 0.2
CDRT15-202ENST00000431716 SV2AQ7L0J3 742 aa16.32■□□□□ 0.2
CDRT15-202ENST00000431716 CREBRFQ8IUR6 639 aa16.32■□□□□ 0.2
CDRT15-202ENST00000431716 LRRC52Q8N7C0 313 aa16.32■□□□□ 0.2
CDRT15-202ENST00000431716 CXorf38Q8TB03 319 aa16.32■□□□□ 0.2
CDRT15-202ENST00000431716 HLA-CQ95604 372 aa16.32■□□□□ 0.2
CDRT15-202ENST00000431716 SLC35C1Q96A29 364 aa16.32■□□□□ 0.2
CDRT15-202ENST00000431716 ZNF560Q96MR9 790 aa16.32■□□□□ 0.2
CDRT15-202ENST00000431716 TMEM8AQ9HCN3 771 aa16.32■□□□□ 0.2
CDRT15-202ENST00000431716 SAMSN1Q9NSI8 373 aaKnown RBP16.32■□□□□ 0.2
CDRT15-202ENST00000431716 FANCLQ9NW38 375 aa16.32■□□□□ 0.2
CDRT15-202ENST00000431716 SIX4Q9UIU6 781 aa16.32■□□□□ 0.2
CDRT15-202ENST00000431716 COG5Q9UP83 839 aa16.32■□□□□ 0.2
CDRT15-202ENST00000431716 AGAP1Q9UPQ3 857 aa16.32■□□□□ 0.2
CDRT15-202ENST00000431716 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.32■□□□□ 0.2
CDRT15-202ENST00000431716 SF3B1O75533 1304 aaKnown RBP eCLIP16.31■□□□□ 0.2
CDRT15-202ENST00000431716 BECN2A8MW95 431 aa16.31■□□□□ 0.2
CDRT15-202ENST00000431716 POLR2BP30876 1174 aaKnown RBP16.31■□□□□ 0.2
CDRT15-202ENST00000431716 MTIF2P46199 727 aaKnown RBP16.31■□□□□ 0.2
CDRT15-202ENST00000431716 GCLMP48507 274 aa16.31■□□□□ 0.2
CDRT15-202ENST00000431716 TAF6P49848 677 aa16.31■□□□□ 0.2
CDRT15-202ENST00000431716 LILRA4P59901 499 aa16.31■□□□□ 0.2
CDRT15-202ENST00000431716 ZNF445P59923 1031 aa16.31■□□□□ 0.2
CDRT15-202ENST00000431716 PPP3CAQ08209 521 aa16.31■□□□□ 0.2
CDRT15-202ENST00000431716 BMS1Q14692 1282 aaKnown RBP16.31■□□□□ 0.2
CDRT15-202ENST00000431716 NCAPHQ15003 741 aa16.31■□□□□ 0.2
CDRT15-202ENST00000431716 CDKAL1Q5VV42 579 aa16.31■□□□□ 0.2
CDRT15-202ENST00000431716 KRT39Q6A163 491 aa16.31■□□□□ 0.2
CDRT15-202ENST00000431716 CD300LGQ6UXG3 332 aa16.31■□□□□ 0.2
CDRT15-202ENST00000431716 C15orf39Q6ZRI6 1047 aa16.31■□□□□ 0.2
CDRT15-202ENST00000431716 TMEM173Q86WV6 379 aaPredicted RBP16.31■□□□□ 0.2
CDRT15-202ENST00000431716 AOPEPQ8N6M6 819 aa16.31■□□□□ 0.2
CDRT15-202ENST00000431716 SPPL3Q8TCT6 385 aa16.31■□□□□ 0.2
CDRT15-202ENST00000431716 BCL7CQ8WUZ0 217 aaPredicted RBP16.31■□□□□ 0.2
CDRT15-202ENST00000431716 TSPY26PQ9H489 355 aa16.31■□□□□ 0.2
CDRT15-202ENST00000431716 NSUN3Q9H649 340 aaKnown RBP16.31■□□□□ 0.2
CDRT15-202ENST00000431716 SCN1AP35498 2009 aa16.3■□□□□ 0.2
CDRT15-202ENST00000431716 ARHGEF37A1IGU5 675 aa16.3■□□□□ 0.2
CDRT15-202ENST00000431716 KCNJ18B7U540 433 aa16.3■□□□□ 0.2
CDRT15-202ENST00000431716 F8W810 466 aa16.3■□□□□ 0.2
CDRT15-202ENST00000431716 PMM2O15305 246 aa16.3■□□□□ 0.2
CDRT15-202ENST00000431716 N4BP1O75113 896 aaKnown RBP16.3■□□□□ 0.2
CDRT15-202ENST00000431716 EFEMP2O95967 443 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms