RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 IGFBP4P22692 258 aa19.9■□□□□ 0.78
RFTN1-202ENST00000431547 DLG4P78352 724 aa19.9■□□□□ 0.78
RFTN1-202ENST00000431547 RBP5P82980 135 aa19.9■□□□□ 0.78
RFTN1-202ENST00000431547 BMS1Q14692 1282 aaKnown RBP19.9■□□□□ 0.78
RFTN1-202ENST00000431547 STX1AQ16623 288 aa19.9■□□□□ 0.78
RFTN1-202ENST00000431547 USP41Q3LFD5 358 aa19.9■□□□□ 0.78
RFTN1-202ENST00000431547 C1orf220Q5T0J3 134 aa19.9■□□□□ 0.78
RFTN1-202ENST00000431547 TAS1R1Q7RTX1 841 aa19.9■□□□□ 0.78
RFTN1-202ENST00000431547 TRAPPC11Q7Z392 1133 aa19.9■□□□□ 0.78
RFTN1-202ENST00000431547 TMC7Q7Z402 723 aa19.9■□□□□ 0.78
RFTN1-202ENST00000431547 FRMD5Q7Z6J6 570 aa19.9■□□□□ 0.78
RFTN1-202ENST00000431547 GPR65Q8IYL9 337 aa19.9■□□□□ 0.78
RFTN1-202ENST00000431547 MICAL1Q8TDZ2 1067 aa19.9■□□□□ 0.78
RFTN1-202ENST00000431547 FAM84AQ96KN4 292 aa19.9■□□□□ 0.78
RFTN1-202ENST00000431547 TCF25Q9BQ70 676 aa19.9■□□□□ 0.78
RFTN1-202ENST00000431547 HERC2P3Q9BVR0 1158 aa19.9■□□□□ 0.78
RFTN1-202ENST00000431547 SRRTQ9BXP5 876 aaKnown RBP19.9■□□□□ 0.78
RFTN1-202ENST00000431547 ZBP1Q9H171 429 aa19.9■□□□□ 0.78
RFTN1-202ENST00000431547 METTL14Q9HCE5 456 aaKnown RBP19.9■□□□□ 0.78
RFTN1-202ENST00000431547 PPEF2O14830 753 aa19.89■□□□□ 0.77
RFTN1-202ENST00000431547 GNA14O95837 355 aa19.89■□□□□ 0.77
RFTN1-202ENST00000431547 ITGB3P05106 788 aa19.89■□□□□ 0.77
RFTN1-202ENST00000431547 IRS1P35568 1242 aa19.89■□□□□ 0.77
RFTN1-202ENST00000431547 BRCC3P46736 316 aa19.89■□□□□ 0.77
RFTN1-202ENST00000431547 AARSP49588 968 aaKnown RBP eCLIP19.89■□□□□ 0.77
RFTN1-202ENST00000431547 LILRA4P59901 499 aa19.89■□□□□ 0.77
RFTN1-202ENST00000431547 FAM171A1Q5VUB5 890 aa19.89■□□□□ 0.77
RFTN1-202ENST00000431547 SUSD3Q96L08 255 aa19.89■□□□□ 0.77
RFTN1-202ENST00000431547 KIAA1671Q9BY89 1806 aa19.89■□□□□ 0.77
RFTN1-202ENST00000431547 ENTPD7Q9NQZ7 604 aa19.89■□□□□ 0.77
RFTN1-202ENST00000431547 ARMCX3Q9UH62 379 aaPredicted RBP19.89■□□□□ 0.77
RFTN1-202ENST00000431547 SIX4Q9UIU6 781 aa19.89■□□□□ 0.77
RFTN1-202ENST00000431547 AGAP1Q9UPQ3 857 aa19.89■□□□□ 0.77
RFTN1-202ENST00000431547 IRAK3Q9Y616 596 aa19.89■□□□□ 0.77
RFTN1-202ENST00000431547 CXCL14O95715 111 aa19.88■□□□□ 0.77
RFTN1-202ENST00000431547 C4BPAP04003 597 aaKnown RBP19.88■□□□□ 0.77
RFTN1-202ENST00000431547 FOSL2P15408 326 aa19.88■□□□□ 0.77
RFTN1-202ENST00000431547 FGFR3P22607 806 aa19.88■□□□□ 0.77
RFTN1-202ENST00000431547 POLR2BP30876 1174 aaKnown RBP19.88■□□□□ 0.77
RFTN1-202ENST00000431547 GTF2H1P32780 548 aa19.88■□□□□ 0.77
RFTN1-202ENST00000431547 PNPLA4P41247 253 aa19.88■□□□□ 0.77
RFTN1-202ENST00000431547 DSG1Q02413 1049 aa19.88■□□□□ 0.77
RFTN1-202ENST00000431547 TYRO3Q06418 890 aa19.88■□□□□ 0.77
RFTN1-202ENST00000431547 SMC1AQ14683 1233 aaKnown RBP19.88■□□□□ 0.77
RFTN1-202ENST00000431547 TIGD5Q53EQ6 642 aa19.88■□□□□ 0.77
RFTN1-202ENST00000431547 KIAA0319Q5VV43 1072 aa19.88■□□□□ 0.77
RFTN1-202ENST00000431547 LRRC52Q8N7C0 313 aa19.88■□□□□ 0.77
RFTN1-202ENST00000431547 MRPL43Q8N983 215 aaKnown RBP19.88■□□□□ 0.77
RFTN1-202ENST00000431547 SSX2IPQ9Y2D8 614 aa19.88■□□□□ 0.77
RFTN1-202ENST00000431547 TDRD15B5MCY1 1934 aaKnown RBP19.88■□□□□ 0.77
RFTN1-202ENST00000431547 CITO14578 2027 aa19.87■□□□□ 0.77
RFTN1-202ENST00000431547 I3L4J1 428 aa19.87■□□□□ 0.77
RFTN1-202ENST00000431547 M0QZQ0 153 aa19.87■□□□□ 0.77
RFTN1-202ENST00000431547 SPTLC1O15269 473 aa19.87■□□□□ 0.77
RFTN1-202ENST00000431547 LILRB3O75022 631 aa19.87■□□□□ 0.77
RFTN1-202ENST00000431547 KRT19P08727 400 aa19.87■□□□□ 0.77
RFTN1-202ENST00000431547 GLUD2P49448 558 aa19.87■□□□□ 0.77
RFTN1-202ENST00000431547 TAF6P49848 677 aa19.87■□□□□ 0.77
RFTN1-202ENST00000431547 MARSP56192 900 aaKnown RBP19.87■□□□□ 0.77
RFTN1-202ENST00000431547 KIAA1841Q6NSI8 718 aa19.87■□□□□ 0.77
RFTN1-202ENST00000431547 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.87■□□□□ 0.77
RFTN1-202ENST00000431547 C15orf39Q6ZRI6 1047 aa19.87■□□□□ 0.77
RFTN1-202ENST00000431547 ZNF560Q96MR9 790 aa19.87■□□□□ 0.77
RFTN1-202ENST00000431547 TTPALQ9BTX7 342 aa19.87■□□□□ 0.77
RFTN1-202ENST00000431547 NSUN3Q9H649 340 aaKnown RBP19.87■□□□□ 0.77
RFTN1-202ENST00000431547 MRPL17Q9NRX2 175 aaKnown RBP19.87■□□□□ 0.77
RFTN1-202ENST00000431547 R3HCC1Q9Y3T6 440 aaKnown RBP19.87■□□□□ 0.77
RFTN1-202ENST00000431547 NLRC5Q86WI3 1866 aa19.87■□□□□ 0.77
RFTN1-202ENST00000431547 CHD7Q9P2D1 2997 aa19.87■□□□□ 0.77
RFTN1-202ENST00000431547 C2orf71A6NGG8 1288 aa19.86■□□□□ 0.77
RFTN1-202ENST00000431547 SYN3O14994 580 aa19.86■□□□□ 0.77
RFTN1-202ENST00000431547 STX10O60499 249 aa19.86■□□□□ 0.77
RFTN1-202ENST00000431547 CST3P01034 146 aaPredicted RBP19.86■□□□□ 0.77
RFTN1-202ENST00000431547 URODP06132 367 aa19.86■□□□□ 0.77
RFTN1-202ENST00000431547 TRIM49P0CI25 452 aa19.86■□□□□ 0.77
RFTN1-202ENST00000431547 TRIM49CP0CI26 452 aa19.86■□□□□ 0.77
RFTN1-202ENST00000431547 CCDC192P0DO97 292 aa19.86■□□□□ 0.77
RFTN1-202ENST00000431547 PPP3CAQ08209 521 aa19.86■□□□□ 0.77
RFTN1-202ENST00000431547 PTPN14Q15678 1187 aa19.86■□□□□ 0.77
RFTN1-202ENST00000431547 TPD52L1Q16890 204 aaPredicted RBP19.86■□□□□ 0.77
RFTN1-202ENST00000431547 ZACNQ401N2 412 aa19.86■□□□□ 0.77
RFTN1-202ENST00000431547 SV2CQ496J9 727 aa19.86■□□□□ 0.77
RFTN1-202ENST00000431547 CCDC40Q4G0X9 1142 aa19.86■□□□□ 0.77
RFTN1-202ENST00000431547 RTP2Q5QGT7 225 aa19.86■□□□□ 0.77
RFTN1-202ENST00000431547 TDRD10Q5VZ19 366 aaKnown RBP19.86■□□□□ 0.77
RFTN1-202ENST00000431547 PLPP4Q5VZY2 271 aa19.86■□□□□ 0.77
RFTN1-202ENST00000431547 SCARA3Q6AZY7 606 aa19.86■□□□□ 0.77
RFTN1-202ENST00000431547 SV2AQ7L0J3 742 aa19.86■□□□□ 0.77
RFTN1-202ENST00000431547 ENOX1Q8TC92 643 aaKnown RBP19.86■□□□□ 0.77
RFTN1-202ENST00000431547 PCDHB8Q9UN66 801 aa19.86■□□□□ 0.77
RFTN1-202ENST00000431547 SYCE3A1L190 88 aa19.85■□□□□ 0.77
RFTN1-202ENST00000431547 HIDE1A8MVS5 230 aa19.85■□□□□ 0.77
RFTN1-202ENST00000431547 KPNA7A9QM74 516 aa19.85■□□□□ 0.77
RFTN1-202ENST00000431547 PHACTR2O75167 634 aa19.85■□□□□ 0.77
RFTN1-202ENST00000431547 CSPG5O95196 566 aa19.85■□□□□ 0.77
RFTN1-202ENST00000431547 GCLMP48507 274 aa19.85■□□□□ 0.77
RFTN1-202ENST00000431547 MYO1EQ12965 1108 aa19.85■□□□□ 0.77
RFTN1-202ENST00000431547 BIRC3Q13489 604 aa19.85■□□□□ 0.77
RFTN1-202ENST00000431547 PDXDC1Q6P996 788 aa19.85■□□□□ 0.77
RFTN1-202ENST00000431547 DSTYKQ6XUX3 929 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms