RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 GRAPLQ8TC17 118 aaPredicted RBP12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 SPATA18Q8TC71 538 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 ARHGEF26Q96DR7 871 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 PCDHGB4Q9UN71 923 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 SATB2Q9UPW6 733 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 CHD1O14646 1710 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 B2RBV5 119 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 CORO7P57737 925 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 BARGINQ6ZT62 677 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 ENOSF1Q7L5Y1 443 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 STX19Q8N4C7 294 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 ZNF280CQ8ND82 737 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 ZBTB10Q96DT7 871 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 EFCAB14O75071 495 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 PCSK7Q16549 785 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 PPP1R18Q6NYC8 613 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 NLGN1Q8N2Q7 840 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 OLFML3Q9NRN5 406 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 NFIBO00712 420 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 ASNSP08243 561 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 CTCFP49711 727 aaPredicted RBP12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 CHI3L2Q15782 390 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 CCDC81Q6ZN84 652 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 SRBD1Q8N5C6 995 aaKnown RBP12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 KLF6Q99612 283 aaPredicted RBP12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 CHORDC1Q9UHD1 332 aaPredicted RBP12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 MTO1Q9Y2Z2 717 aaKnown RBP12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 A8MXQ7 604 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 IYDQ6PHW0 289 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 WNK4Q96J92 1243 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 SHCBP1LQ9BZQ2 653 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 ITIH6Q6UXX5 1313 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 IGKV5-2P06315 115 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 SRGNP10124 158 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 ACTR2P61160 394 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 C11orf74Q86VG3 221 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 HORMAD1Q86X24 394 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 AGBL1Q96MI9 1066 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 SPATA33Q96N06 139 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 TRIM54Q9BYV2 358 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 IMPDH2P12268 514 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 SERPINB1P30740 379 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 PLA2G4AP47712 749 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 ACOT2P49753 483 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 NLRP11P59045 1033 aaKnown RBP12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 CNDP1Q96KN2 507 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 SPON2Q9BUD6 331 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 TRIM9Q9C026 710 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 TRIM45Q9H8W5 580 aaPredicted RBP12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 GID8Q9NWU2 228 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 MINPP1Q9UNW1 487 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 SPDYE5A6NIY4 337 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 NBNO60934 754 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 UCHL3P15374 230 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 ITGA8P53708 1063 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 SPDYE7PQ495Y7 208 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 LAYNQ6UX15 382 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 RSPH10B2B2RC85 870 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 SUPT3HB4E1H0 165 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 RSPH10BP0C881 870 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 ITIH2P19823 946 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 HSD17B3P37058 310 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 PPP3CCP48454 512 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 FMO5P49326 533 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 DNAJC3Q13217 504 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 FAM180AQ6UWF9 173 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 TC2NQ8N9U0 490 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 ARHGEF1Q92888 912 aaKnown RBP12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 M0R3G1 203 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 ZNF235Q14590 738 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 PRPF18Q99633 342 aaKnown RBP12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 ZNF335Q9H4Z2 1342 aaPredicted RBP12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 FAM205CA6NFA0 338 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 DLGAP3O95886 979 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 GRIK1P39086 918 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 CLK1P49759 484 aaKnown RBP12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 C18orf8Q96DM3 657 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 NSL1Q96IY1 281 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 CCDC134Q9H6E4 229 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 ABCE1P61221 599 aaKnown RBP12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 ZHX2Q9Y6X8 837 aa12.29□□□□□ -0.44
RIMKLA-202ENST00000431473 SERPIND1P05546 499 aa12.28□□□□□ -0.44
RIMKLA-202ENST00000431473 IREB2P48200 963 aaKnown RBP12.28□□□□□ -0.44
RIMKLA-202ENST00000431473 STOX1Q6ZVD7 989 aa12.28□□□□□ -0.44
RIMKLA-202ENST00000431473 ELMOD1Q8N336 334 aa12.28□□□□□ -0.44
RIMKLA-202ENST00000431473 SEPT3Q9UH03 358 aa12.28□□□□□ -0.44
RIMKLA-202ENST00000431473 C16orf96A6NNT2 1141 aa12.28□□□□□ -0.44
RIMKLA-202ENST00000431473 NAB2Q15742 525 aa12.28□□□□□ -0.44
RIMKLA-202ENST00000431473 CYB5D1Q6P9G0 228 aa12.28□□□□□ -0.44
RIMKLA-202ENST00000431473 FAM32AQ9Y421 112 aaKnown RBP12.28□□□□□ -0.44
RIMKLA-202ENST00000431473 P4HBP07237 508 aaKnown RBP12.28□□□□□ -0.44
RIMKLA-202ENST00000431473 RCSD1Q6JBY9 416 aa12.28□□□□□ -0.44
RIMKLA-202ENST00000431473 RAD9BQ6WBX8 426 aa12.28□□□□□ -0.44
RIMKLA-202ENST00000431473 PHF21AQ96BD5 680 aa12.28□□□□□ -0.44
RIMKLA-202ENST00000431473 FAM167AQ96KS9 214 aa12.28□□□□□ -0.44
RIMKLA-202ENST00000431473 PNKPQ96T60 521 aa12.28□□□□□ -0.44
RIMKLA-202ENST00000431473 GSG1L2A8MUP6 293 aa12.28□□□□□ -0.44
RIMKLA-202ENST00000431473 KLHL2O95198 593 aa12.28□□□□□ -0.44
RIMKLA-202ENST00000431473 FKBP9O95302 570 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms