RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 TCEAL5Q5H9L2 206 aa27.16■■□□□ 1.94
CPNE1-212ENST00000430570 FAM171A1Q5VUB5 890 aa27.16■■□□□ 1.94
CPNE1-212ENST00000430570 BORCS6Q96GS4 357 aa27.16■■□□□ 1.94
CPNE1-212ENST00000430570 ANKRD36BP1Q96IX9 119 aa27.16■■□□□ 1.94
CPNE1-212ENST00000430570 NSUN3Q9H649 340 aaKnown RBP27.16■■□□□ 1.94
CPNE1-212ENST00000430570 CHST7Q9NS84 486 aa27.16■■□□□ 1.94
CPNE1-212ENST00000430570 NUB1Q9Y5A7 615 aa27.16■■□□□ 1.94
CPNE1-212ENST00000430570 LILRB3O75022 631 aa27.16■■□□□ 1.94
CPNE1-212ENST00000430570 ITGB3P05106 788 aa27.16■■□□□ 1.94
CPNE1-212ENST00000430570 KLHL40Q2TBA0 621 aa27.16■■□□□ 1.94
CPNE1-212ENST00000430570 C1orf220Q5T0J3 134 aa27.16■■□□□ 1.94
CPNE1-212ENST00000430570 KIAA0319Q5VV43 1072 aa27.16■■□□□ 1.94
CPNE1-212ENST00000430570 CSGALNACT2Q8N6G5 542 aa27.16■■□□□ 1.94
CPNE1-212ENST00000430570 MRPL43Q8N983 215 aaKnown RBP27.16■■□□□ 1.94
CPNE1-212ENST00000430570 TMC2Q8TDI7 906 aa27.16■■□□□ 1.94
CPNE1-212ENST00000430570 PPM1EQ8WY54 764 aa27.16■■□□□ 1.94
CPNE1-212ENST00000430570 NGRNQ9NPE2 291 aaKnown RBP27.16■■□□□ 1.94
CPNE1-212ENST00000430570 SIX4Q9UIU6 781 aa27.16■■□□□ 1.94
CPNE1-212ENST00000430570 SCN1AP35498 2009 aa27.15■■□□□ 1.94
CPNE1-212ENST00000430570 BICDL2A1A5D9 508 aa27.15■■□□□ 1.94
CPNE1-212ENST00000430570 C2orf71A6NGG8 1288 aa27.15■■□□□ 1.94
CPNE1-212ENST00000430570 C2CD2LO14523 706 aa27.15■■□□□ 1.94
CPNE1-212ENST00000430570 SPTLC1O15269 473 aa27.15■■□□□ 1.94
CPNE1-212ENST00000430570 PTMSP20962 102 aa27.15■■□□□ 1.94
CPNE1-212ENST00000430570 POLR2BP30876 1174 aaKnown RBP27.15■■□□□ 1.94
CPNE1-212ENST00000430570 CLDN10P78369 228 aa27.15■■□□□ 1.94
CPNE1-212ENST00000430570 SMC1AQ14683 1233 aaKnown RBP27.15■■□□□ 1.94
CPNE1-212ENST00000430570 PTPN14Q15678 1187 aa27.15■■□□□ 1.94
CPNE1-212ENST00000430570 USP41Q3LFD5 358 aa27.15■■□□□ 1.94
CPNE1-212ENST00000430570 RTP2Q5QGT7 225 aa27.15■■□□□ 1.94
CPNE1-212ENST00000430570 PDE12Q6L8Q7 609 aaKnown RBP27.15■■□□□ 1.94
CPNE1-212ENST00000430570 FOXR2Q6PJQ5 311 aa27.15■■□□□ 1.94
CPNE1-212ENST00000430570 CEP57Q86XR8 500 aa27.15■■□□□ 1.94
CPNE1-212ENST00000430570 MKNK1Q9BUB5 465 aa27.15■■□□□ 1.94
CPNE1-212ENST00000430570 STK39Q9UEW8 545 aa27.15■■□□□ 1.94
CPNE1-212ENST00000430570 RWDD2AQ9UIY3 292 aa27.15■■□□□ 1.94
CPNE1-212ENST00000430570 AGAP1Q9UPQ3 857 aa27.15■■□□□ 1.94
CPNE1-212ENST00000430570 VWA8A3KMH1 1905 aa27.14■■□□□ 1.93
CPNE1-212ENST00000430570 TNNC2P02585 160 aa27.14■■□□□ 1.93
CPNE1-212ENST00000430570 CA8P35219 290 aa27.14■■□□□ 1.93
CPNE1-212ENST00000430570 VAMP7P51809 220 aa27.14■■□□□ 1.93
CPNE1-212ENST00000430570 LILRA4P59901 499 aa27.14■■□□□ 1.93
CPNE1-212ENST00000430570 DSG1Q02413 1049 aa27.14■■□□□ 1.93
CPNE1-212ENST00000430570 ELAVL2Q12926 359 aaKnown RBP27.14■■□□□ 1.93
CPNE1-212ENST00000430570 TRAPPC11Q7Z392 1133 aa27.14■■□□□ 1.93
CPNE1-212ENST00000430570 RBM23Q86U06 439 aaKnown RBP27.14■■□□□ 1.93
CPNE1-212ENST00000430570 ITGA11Q9UKX5 1188 aa27.14■■□□□ 1.93
CPNE1-212ENST00000430570 TRANK1O15050 2925 aa27.13■■□□□ 1.93
CPNE1-212ENST00000430570 PER2O15055 1255 aa27.13■■□□□ 1.93
CPNE1-212ENST00000430570 CST3P01034 146 aaPredicted RBP27.13■■□□□ 1.93
CPNE1-212ENST00000430570 C4BPAP04003 597 aaKnown RBP27.13■■□□□ 1.93
CPNE1-212ENST00000430570 URODP06132 367 aa27.13■■□□□ 1.93
CPNE1-212ENST00000430570 KRT19P08727 400 aa27.13■■□□□ 1.93
CPNE1-212ENST00000430570 EPB41P11171 864 aaKnown RBP27.13■■□□□ 1.93
CPNE1-212ENST00000430570 FGFR3P22607 806 aa27.13■■□□□ 1.93
CPNE1-212ENST00000430570 TKTP29401 623 aaKnown RBP27.13■■□□□ 1.93
CPNE1-212ENST00000430570 GTF2F1P35269 517 aaKnown RBP eCLIP27.13■■□□□ 1.936e-10■■■□□ 14.7
CPNE1-212ENST00000430570 GLUD2P49448 558 aa27.13■■□□□ 1.93
CPNE1-212ENST00000430570 AARSP49588 968 aaKnown RBP eCLIP27.13■■□□□ 1.93
CPNE1-212ENST00000430570 BFSP1Q12934 665 aa27.13■■□□□ 1.93
CPNE1-212ENST00000430570 INTS8Q75QN2 995 aaKnown RBP27.13■■□□□ 1.93
CPNE1-212ENST00000430570 FILIP1Q7Z7B0 1213 aa27.13■■□□□ 1.93
CPNE1-212ENST00000430570 MAFAQ8NHW3 353 aaPredicted RBP27.13■■□□□ 1.93
CPNE1-212ENST00000430570 SUSD3Q96L08 255 aa27.13■■□□□ 1.93
CPNE1-212ENST00000430570 TTPALQ9BTX7 342 aa27.13■■□□□ 1.93
CPNE1-212ENST00000430570 IRAK3Q9Y616 596 aa27.13■■□□□ 1.93
CPNE1-212ENST00000430570 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.12■■□□□ 1.93
CPNE1-212ENST00000430570 TRAPPC3O43617 180 aa27.12■■□□□ 1.93
CPNE1-212ENST00000430570 TRIM49P0CI25 452 aa27.12■■□□□ 1.93
CPNE1-212ENST00000430570 TRIM49CP0CI26 452 aa27.12■■□□□ 1.93
CPNE1-212ENST00000430570 MCCD1P59942 119 aaPredicted RBP27.12■■□□□ 1.93
CPNE1-212ENST00000430570 HYAL1Q12794 435 aa27.12■■□□□ 1.93
CPNE1-212ENST00000430570 KIAA1841Q6NSI8 718 aa27.12■■□□□ 1.93
CPNE1-212ENST00000430570 SASS6Q6UVJ0 657 aa27.12■■□□□ 1.93
CPNE1-212ENST00000430570 PRSS55Q6UWB4 352 aaPredicted RBP27.12■■□□□ 1.93
CPNE1-212ENST00000430570 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.12■■□□□ 1.93
CPNE1-212ENST00000430570 RIN2Q8WYP3 895 aaPredicted RBP27.12■■□□□ 1.93
CPNE1-212ENST00000430570 CEP63Q96MT8 703 aa27.12■■□□□ 1.93
CPNE1-212ENST00000430570 SRRTQ9BXP5 876 aaKnown RBP27.12■■□□□ 1.93
CPNE1-212ENST00000430570 MRPL17Q9NRX2 175 aaKnown RBP27.12■■□□□ 1.93
CPNE1-212ENST00000430570 SLC16A3O15427 465 aaKnown RBP27.11■■□□□ 1.93
CPNE1-212ENST00000430570 KRT13P13646 458 aa27.11■■□□□ 1.93
CPNE1-212ENST00000430570 TAF6P49848 677 aa27.11■■□□□ 1.93
CPNE1-212ENST00000430570 RBP5P82980 135 aa27.11■■□□□ 1.93
CPNE1-212ENST00000430570 BMS1Q14692 1282 aaKnown RBP27.11■■□□□ 1.93
CPNE1-212ENST00000430570 NFKBIBQ15653 356 aa27.11■■□□□ 1.93
CPNE1-212ENST00000430570 LNX1Q8TBB1 728 aaPredicted RBP27.11■■□□□ 1.93
CPNE1-212ENST00000430570 TLE6Q9H808 572 aa27.11■■□□□ 1.93
CPNE1-212ENST00000430570 M0QZQ0 153 aa27.1■■□□□ 1.93
CPNE1-212ENST00000430570 NRIP1P48552 1158 aa27.1■■□□□ 1.93
CPNE1-212ENST00000430570 PPP3CAQ08209 521 aa27.1■■□□□ 1.93
CPNE1-212ENST00000430570 TDRD10Q5VZ19 366 aaKnown RBP27.1■■□□□ 1.93
CPNE1-212ENST00000430570 DSTYKQ6XUX3 929 aa27.1■■□□□ 1.93
CPNE1-212ENST00000430570 SYAP1Q96A49 352 aaPredicted RBP27.1■■□□□ 1.93
CPNE1-212ENST00000430570 SENP8Q96LD8 212 aa27.1■■□□□ 1.93
CPNE1-212ENST00000430570 KLHL5Q96PQ7 755 aa27.1■■□□□ 1.93
CPNE1-212ENST00000430570 IGFLR1Q9H665 355 aa27.1■■□□□ 1.93
CPNE1-212ENST00000430570 PCDHB8Q9UN66 801 aa27.1■■□□□ 1.93
CPNE1-212ENST00000430570 TIMM13Q9Y5L4 95 aaPredicted RBP27.1■■□□□ 1.93
CPNE1-212ENST00000430570 IKBKBO14920 756 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms