RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 HAPLN3Q96S86 360 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 KLF6Q99612 283 aaPredicted RBP11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 CENPKQ9BS16 269 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 GOLGA8RI6L899 631 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 OPHN1O60890 802 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 SPATA31C1P0DKV0 1188 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 TROVE2P10155 538 aaKnown RBP eCLIP11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 ESRRAP11474 423 aaPredicted RBP11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 DSG1Q02413 1049 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 LRRC36Q1X8D7 754 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 MDH1BQ5I0G3 518 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 PCNX4Q63HM2 1172 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 SLC30A10Q6XR72 485 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 SLC25A41Q8N5S1 370 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 SYT2Q8N9I0 419 aaPredicted RBP11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 NEDD1Q8NHV4 660 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 FNBP1Q96RU3 617 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 ECSITQ9BQ95 431 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 DCLK3Q9C098 648 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 EBF3Q9H4W6 596 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 DDX43Q9NXZ2 648 aaKnown RBP11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 ANKFY1Q9P2R3 1169 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 TMCO1Q9UM00 188 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 SLC4A7Q9Y6M7 1214 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 ARFGEF1Q9Y6D6 1849 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 MAST2Q6P0Q8 1798 aa11.74□□□□□ -0.53
SEMA4D-209ENST00000429836 PFDN1O60925 122 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 ANPEPP15144 967 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 MAGEA10P43363 369 aaPredicted RBP11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 CLK2P49760 499 aaKnown RBP11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 KCNQ4P56696 695 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 DLG4P78352 724 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 ACBD5Q5T8D3 534 aaPredicted RBP11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 CEP128Q6ZU80 1094 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 MARK2Q7KZI7 788 aaKnown RBP11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 NOP9Q86U38 636 aaKnown RBP11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 SPATA24Q86W54 205 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 LRRC6Q86X45 466 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 NAT14Q8WUY8 206 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 VPS37BQ9H9H4 285 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 JMJD4Q9H9V9 463 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 CLIC5Q9NZA1 410 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 LARSQ9P2J5 1176 aaKnown RBP11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 CHMP2BQ9UQN3 213 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 PENKP01210 267 aaPredicted RBP11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 KRT4P19013 534 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 LMNB2Q03252 620 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 BMT2Q1RMZ1 405 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 OLFML2BQ68BL8 750 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 ISLR2Q6UXK2 745 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 ADGRF4Q8IZF3 695 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 CCDC24Q8N4L8 307 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 MYCT1Q8N699 235 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 MPP4Q96JB8 637 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 PSTPIP2Q9H939 334 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 STK32BQ9NY57 414 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 HSFX1Q9UBD0 423 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 COMMD3-BMI1R4GMX3 469 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 TYROBPO43914 113 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 HNRNPCL1O60812 293 aaKnown RBP11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 CALCAP01258 141 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 MAGEA8P43361 318 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 ARFIP2P53365 341 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 CDC16Q13042 620 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 DDB1Q16531 1140 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 P3H1Q32P28 736 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 PRR16Q569H4 304 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 EAPPQ56P03 285 aaPredicted RBP11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 SATL1Q86VE3 508 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 MYLK4Q86YV6 388 aaPredicted RBP11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 ELMO3Q96BJ8 720 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 FAM163AQ96GL9 167 aaPredicted RBP11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 TMEM120AQ9BXJ8 343 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 ANGPTL2Q9UKU9 493 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 BLOC1S6Q9UL45 172 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 PPM1HQ9ULR3 514 aa11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 SMG5Q9UPR3 1016 aaKnown RBP11.73□□□□□ -0.53
SEMA4D-209ENST00000429836 BANF1O75531 89 aa11.72□□□□□ -0.53
SEMA4D-209ENST00000429836 CAMTA2O94983 1202 aa11.72□□□□□ -0.53
SEMA4D-209ENST00000429836 HARSP12081 509 aaKnown RBP11.72□□□□□ -0.53
SEMA4D-209ENST00000429836 GYS1P13807 737 aa11.72□□□□□ -0.53
SEMA4D-209ENST00000429836 VAV1P15498 845 aa11.72□□□□□ -0.53
SEMA4D-209ENST00000429836 CAV1Q03135 178 aa11.72□□□□□ -0.53
SEMA4D-209ENST00000429836 TTLL12Q14166 644 aaPredicted RBP11.72□□□□□ -0.53
SEMA4D-209ENST00000429836 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.72□□□□□ -0.53
SEMA4D-209ENST00000429836 PARP10Q53GL7 1025 aa11.72□□□□□ -0.53
SEMA4D-209ENST00000429836 SPDYAQ5MJ70 313 aa11.72□□□□□ -0.53
SEMA4D-209ENST00000429836 DPY19L2Q6NUT2 758 aa11.72□□□□□ -0.53
SEMA4D-209ENST00000429836 RAPH1Q70E73 1250 aa11.72□□□□□ -0.53
SEMA4D-209ENST00000429836 SLC47A2Q86VL8 602 aa11.72□□□□□ -0.53
SEMA4D-209ENST00000429836 GLIS1Q8NBF1 620 aa11.72□□□□□ -0.53
SEMA4D-209ENST00000429836 CFAP61Q8NHU2 1237 aa11.72□□□□□ -0.53
SEMA4D-209ENST00000429836 LMO3Q8TAP4 145 aa11.72□□□□□ -0.53
SEMA4D-209ENST00000429836 SHKBP1Q8TBC3 707 aa11.72□□□□□ -0.53
SEMA4D-209ENST00000429836 RBM17Q96I25 401 aaKnown RBP11.72□□□□□ -0.53
SEMA4D-209ENST00000429836 SLC17A7Q9P2U7 560 aa11.72□□□□□ -0.53
SEMA4D-209ENST00000429836 PCDHGA4Q9Y5G9 962 aa11.72□□□□□ -0.53
SEMA4D-209ENST00000429836 H3BRJ5 948 aa11.72□□□□□ -0.53
SEMA4D-209ENST00000429836 ZBTB39O15060 712 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms