RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 CTNND2Q9UQB3 1225 aa16.15■□□□□ 0.18
GARNL3-204ENST00000429629 MTCH2Q9Y6C9 303 aa16.15■□□□□ 0.18
GARNL3-204ENST00000429629 FNDC1Q4ZHG4 1894 aaPredicted RBP16.14■□□□□ 0.17
GARNL3-204ENST00000429629 LRRIQ3A6PVS8 624 aaPredicted RBP16.14■□□□□ 0.17
GARNL3-204ENST00000429629 M0QZQ0 153 aa16.14■□□□□ 0.17
GARNL3-204ENST00000429629 NCK2O43639 380 aa16.14■□□□□ 0.17
GARNL3-204ENST00000429629 CAVIN2O95810 425 aa16.14■□□□□ 0.17
GARNL3-204ENST00000429629 C4BPAP04003 597 aaKnown RBP16.14■□□□□ 0.17
GARNL3-204ENST00000429629 CCDC192P0DO97 292 aa16.14■□□□□ 0.17
GARNL3-204ENST00000429629 FGFR3P22607 806 aa16.14■□□□□ 0.17
GARNL3-204ENST00000429629 DNAJB1P25685 340 aa16.14■□□□□ 0.17
GARNL3-204ENST00000429629 ATICP31939 592 aa16.14■□□□□ 0.17
GARNL3-204ENST00000429629 DSG1Q02413 1049 aa16.14■□□□□ 0.17
GARNL3-204ENST00000429629 ADGRE1Q14246 886 aa16.14■□□□□ 0.17
GARNL3-204ENST00000429629 ZACNQ401N2 412 aa16.14■□□□□ 0.17
GARNL3-204ENST00000429629 TIGD5Q53EQ6 642 aa16.14■□□□□ 0.17
GARNL3-204ENST00000429629 C1orf220Q5T0J3 134 aa16.14■□□□□ 0.17
GARNL3-204ENST00000429629 KIAA0319Q5VV43 1072 aa16.14■□□□□ 0.17
GARNL3-204ENST00000429629 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.14■□□□□ 0.17
GARNL3-204ENST00000429629 C15orf39Q6ZRI6 1047 aa16.14■□□□□ 0.17
GARNL3-204ENST00000429629 Q7L0L9 218 aa16.14■□□□□ 0.17
GARNL3-204ENST00000429629 C3orf58Q8NDZ4 430 aa16.14■□□□□ 0.17
GARNL3-204ENST00000429629 OR5B17Q8NGF7 314 aa16.14■□□□□ 0.17
GARNL3-204ENST00000429629 ZNF516Q92618 1163 aa16.14■□□□□ 0.17
GARNL3-204ENST00000429629 PPP2R3CQ969Q6 453 aa16.14■□□□□ 0.17
GARNL3-204ENST00000429629 VN1R3Q9BXE9 311 aa16.14■□□□□ 0.17
GARNL3-204ENST00000429629 SRRTQ9BXP5 876 aaKnown RBP16.14■□□□□ 0.17
GARNL3-204ENST00000429629 OXCT2Q9BYC2 517 aaPredicted RBP16.14■□□□□ 0.17
GARNL3-204ENST00000429629 GPR62Q9BZJ7 368 aa16.14■□□□□ 0.17
GARNL3-204ENST00000429629 ZBP1Q9H171 429 aa16.14■□□□□ 0.17
GARNL3-204ENST00000429629 THAP9Q9H5L6 903 aa16.14■□□□□ 0.17
GARNL3-204ENST00000429629 VRTNQ9H8Y1 702 aa16.14■□□□□ 0.17
GARNL3-204ENST00000429629 RXFP1Q9HBX9 757 aa16.14■□□□□ 0.17
GARNL3-204ENST00000429629 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.14■□□□□ 0.17
GARNL3-204ENST00000429629 R3HCC1Q9Y3T6 440 aaKnown RBP16.14■□□□□ 0.17
GARNL3-204ENST00000429629 NUB1Q9Y5A7 615 aa16.14■□□□□ 0.17
GARNL3-204ENST00000429629 RFXAPO00287 272 aa16.13■□□□□ 0.17
GARNL3-204ENST00000429629 TAF6P49848 677 aa16.13■□□□□ 0.17
GARNL3-204ENST00000429629 ERVFC1P60507 584 aa16.13■□□□□ 0.17
GARNL3-204ENST00000429629 CREMQ03060 361 aa16.13■□□□□ 0.17
GARNL3-204ENST00000429629 SMC1AQ14683 1233 aaKnown RBP16.13■□□□□ 0.17
GARNL3-204ENST00000429629 DPH6Q7L8W6 267 aa16.13■□□□□ 0.17
GARNL3-204ENST00000429629 TMC7Q7Z402 723 aa16.13■□□□□ 0.17
GARNL3-204ENST00000429629 APPL2Q8NEU8 664 aa16.13■□□□□ 0.17
GARNL3-204ENST00000429629 SPATA18Q8TC71 538 aa16.13■□□□□ 0.17
GARNL3-204ENST00000429629 GDPD5Q8WTR4 605 aa16.13■□□□□ 0.17
GARNL3-204ENST00000429629 TAF4BQ92750 862 aa16.13■□□□□ 0.17
GARNL3-204ENST00000429629 FAXDC2Q96IV6 333 aa16.13■□□□□ 0.17
GARNL3-204ENST00000429629 ZNF560Q96MR9 790 aa16.13■□□□□ 0.17
GARNL3-204ENST00000429629 FAM161BQ96MY7 647 aa16.13■□□□□ 0.17
GARNL3-204ENST00000429629 POP1Q99575 1024 aaKnown RBP16.13■□□□□ 0.17
GARNL3-204ENST00000429629 CDCA3Q99618 268 aaPredicted RBP16.13■□□□□ 0.17
GARNL3-204ENST00000429629 BPIFA3Q9BQP9 254 aa16.13■□□□□ 0.17
GARNL3-204ENST00000429629 TTPALQ9BTX7 342 aa16.13■□□□□ 0.17
GARNL3-204ENST00000429629 MTMR12Q9C0I1 747 aa16.13■□□□□ 0.17
GARNL3-204ENST00000429629 NAT10Q9H0A0 1025 aaKnown RBP16.13■□□□□ 0.17
GARNL3-204ENST00000429629 MRPL17Q9NRX2 175 aaKnown RBP16.13■□□□□ 0.17
GARNL3-204ENST00000429629 GDAP2Q9NXN4 497 aa16.13■□□□□ 0.17
GARNL3-204ENST00000429629 FNIP2Q9P278 1114 aa16.13■□□□□ 0.17
GARNL3-204ENST00000429629 SIX4Q9UIU6 781 aa16.13■□□□□ 0.17
GARNL3-204ENST00000429629 F8W810 466 aa16.12■□□□□ 0.17
GARNL3-204ENST00000429629 CXCL14O95715 111 aa16.12■□□□□ 0.17
GARNL3-204ENST00000429629 CYP11A1P05108 521 aa16.12■□□□□ 0.17
GARNL3-204ENST00000429629 TYMPP19971 482 aa16.12■□□□□ 0.17
GARNL3-204ENST00000429629 STX17P56962 302 aa16.12■□□□□ 0.17
GARNL3-204ENST00000429629 TYRO3Q06418 890 aa16.12■□□□□ 0.17
GARNL3-204ENST00000429629 MYO1EQ12965 1108 aa16.12■□□□□ 0.17
GARNL3-204ENST00000429629 MRPL58Q14197 206 aaKnown RBP16.12■□□□□ 0.17
GARNL3-204ENST00000429629 SV2CQ496J9 727 aa16.12■□□□□ 0.17
GARNL3-204ENST00000429629 SV2AQ7L0J3 742 aa16.12■□□□□ 0.17
GARNL3-204ENST00000429629 MICAL1Q8TDZ2 1067 aa16.12■□□□□ 0.17
GARNL3-204ENST00000429629 PIK3R5Q8WYR1 880 aa16.12■□□□□ 0.17
GARNL3-204ENST00000429629 TCF25Q9BQ70 676 aa16.12■□□□□ 0.17
GARNL3-204ENST00000429629 FUCA2Q9BTY2 467 aa16.12■□□□□ 0.17
GARNL3-204ENST00000429629 NSUN3Q9H649 340 aaKnown RBP16.12■□□□□ 0.17
GARNL3-204ENST00000429629 TMEM8AQ9HCN3 771 aa16.12■□□□□ 0.17
GARNL3-204ENST00000429629 DSEQ9UL01 958 aa16.12■□□□□ 0.17
GARNL3-204ENST00000429629 PCDHB8Q9UN66 801 aa16.12■□□□□ 0.17
GARNL3-204ENST00000429629 AGAP1Q9UPQ3 857 aa16.12■□□□□ 0.17
GARNL3-204ENST00000429629 STXBP5LQ9Y2K9 1186 aa16.12■□□□□ 0.17
GARNL3-204ENST00000429629 COQ4Q9Y3A0 265 aa16.12■□□□□ 0.17
GARNL3-204ENST00000429629 PTPRJQ12913 1337 aa16.12■□□□□ 0.17
GARNL3-204ENST00000429629 SZT2Q5T011 3432 aa16.11■□□□□ 0.17
GARNL3-204ENST00000429629 TRANK1O15050 2925 aa16.11■□□□□ 0.17
GARNL3-204ENST00000429629 KPNA7A9QM74 516 aa16.11■□□□□ 0.17
GARNL3-204ENST00000429629 P4HA2O15460 535 aa16.11■□□□□ 0.17
GARNL3-204ENST00000429629 OAZ2O95190 189 aa16.11■□□□□ 0.17
GARNL3-204ENST00000429629 CST3P01034 146 aaPredicted RBP16.11■□□□□ 0.17
GARNL3-204ENST00000429629 ITGB3P05106 788 aa16.11■□□□□ 0.17
GARNL3-204ENST00000429629 URODP06132 367 aa16.11■□□□□ 0.17
GARNL3-204ENST00000429629 POLR2BP30876 1174 aaKnown RBP16.11■□□□□ 0.17
GARNL3-204ENST00000429629 GLUD2P49448 558 aa16.11■□□□□ 0.17
GARNL3-204ENST00000429629 GUCY2FP51841 1108 aa16.11■□□□□ 0.17
GARNL3-204ENST00000429629 DLG4P78352 724 aa16.11■□□□□ 0.17
GARNL3-204ENST00000429629 SGSM1Q2NKQ1 1148 aa16.11■□□□□ 0.17
GARNL3-204ENST00000429629 FAM171A1Q5VUB5 890 aa16.11■□□□□ 0.17
GARNL3-204ENST00000429629 KRT39Q6A163 491 aa16.11■□□□□ 0.17
GARNL3-204ENST00000429629 KIAA1841Q6NSI8 718 aa16.11■□□□□ 0.17
GARNL3-204ENST00000429629 ANKS3Q6ZW76 656 aa16.11■□□□□ 0.17
GARNL3-204ENST00000429629 TAS1R1Q7RTX1 841 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms