RNA–Protein interactions for RNA: ENST00000428950.2

CCDC144A-208, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5

Gene CCDC144A, Length 780 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-208ENST00000428950 GRM6O15303 877 aa4.22□□□□□ -1.73
CCDC144A-208ENST00000428950 HTRA2O43464 458 aaPredicted RBP4.22□□□□□ -1.73
CCDC144A-208ENST00000428950 KATNA1O75449 491 aa4.22□□□□□ -1.73
CCDC144A-208ENST00000428950 MTHFD1P11586 935 aaKnown RBP4.22□□□□□ -1.73
CCDC144A-208ENST00000428950 EDNRBP24530 442 aa4.22□□□□□ -1.73
CCDC144A-208ENST00000428950 CXCR5P32302 372 aa4.22□□□□□ -1.73
CCDC144A-208ENST00000428950 PLA2G5P39877 138 aa4.22□□□□□ -1.73
CCDC144A-208ENST00000428950 AMPD3Q01432 767 aa4.22□□□□□ -1.73
CCDC144A-208ENST00000428950 KIF23Q02241 960 aaPredicted RBP4.22□□□□□ -1.73
CCDC144A-208ENST00000428950 RAB39AQ14964 217 aa4.22□□□□□ -1.73
CCDC144A-208ENST00000428950 PCBP2Q15366 365 aaKnown RBP eCLIP4.22□□□□□ -1.73
CCDC144A-208ENST00000428950 GEN1Q17RS7 908 aa4.22□□□□□ -1.73
CCDC144A-208ENST00000428950 ERCC6LQ2NKX8 1250 aa4.22□□□□□ -1.73
CCDC144A-208ENST00000428950 C3orf36Q3SXR2 165 aa4.22□□□□□ -1.73
CCDC144A-208ENST00000428950 PABPC1LQ4VXU2 614 aaKnown RBP4.22□□□□□ -1.73
CCDC144A-208ENST00000428950 Q6ZNX1 250 aa4.22□□□□□ -1.73
CCDC144A-208ENST00000428950 ADGRG3Q86Y34 549 aa4.22□□□□□ -1.73
CCDC144A-208ENST00000428950 PRPF38AQ8NAV1 312 aaKnown RBP4.22□□□□□ -1.73
CCDC144A-208ENST00000428950 BBC3Q96PG8 261 aaPredicted RBP4.22□□□□□ -1.73
CCDC144A-208ENST00000428950 CCDC8Q9H0W5 538 aaPredicted RBP4.22□□□□□ -1.73
CCDC144A-208ENST00000428950 PRDM13Q9H4Q3 707 aa4.22□□□□□ -1.73
CCDC144A-208ENST00000428950 UNKLQ9H9P5 680 aaKnown RBP4.22□□□□□ -1.73
CCDC144A-208ENST00000428950 CASS4Q9NQ75 786 aa4.22□□□□□ -1.73
CCDC144A-208ENST00000428950 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.22□□□□□ -1.73
CCDC144A-208ENST00000428950 LIMCH1Q9UPQ0 1083 aa4.22□□□□□ -1.73
CCDC144A-208ENST00000428950 CADPSQ9ULU8 1353 aa4.22□□□□□ -1.73
CCDC144A-208ENST00000428950 CCDC154A6NI56 674 aa4.21□□□□□ -1.74
CCDC144A-208ENST00000428950 ALG1L2C9J202 215 aa4.21□□□□□ -1.74
CCDC144A-208ENST00000428950 ZFPL1O95159 310 aa4.21□□□□□ -1.74
CCDC144A-208ENST00000428950 CD1AP06126 327 aa4.21□□□□□ -1.74
CCDC144A-208ENST00000428950 SBK3P0C264 359 aa4.21□□□□□ -1.74
CCDC144A-208ENST00000428950 FBLP22087 321 aaKnown RBP4.21□□□□□ -1.74
CCDC144A-208ENST00000428950 TLE1Q04724 770 aa4.21□□□□□ -1.74
CCDC144A-208ENST00000428950 IL10RAQ13651 578 aa4.21□□□□□ -1.74
CCDC144A-208ENST00000428950 FAM50AQ14320 339 aaKnown RBP4.21□□□□□ -1.74
CCDC144A-208ENST00000428950 COLGALT2Q8IYK4 626 aa4.21□□□□□ -1.74
CCDC144A-208ENST00000428950 SIMC1Q8NDZ2 872 aa4.21□□□□□ -1.74
CCDC144A-208ENST00000428950 COA7Q96BR5 231 aa4.21□□□□□ -1.74
CCDC144A-208ENST00000428950 ZNF764Q96H86 408 aaPredicted RBP4.21□□□□□ -1.74
CCDC144A-208ENST00000428950 MRGPRX4Q96LA9 322 aa4.21□□□□□ -1.74
CCDC144A-208ENST00000428950 AIFM2Q9BRQ8 373 aa4.21□□□□□ -1.74
CCDC144A-208ENST00000428950 TLR10Q9BXR5 811 aa4.21□□□□□ -1.74
CCDC144A-208ENST00000428950 PACSIN1Q9BY11 444 aa4.21□□□□□ -1.74
CCDC144A-208ENST00000428950 KCTD5Q9NXV2 234 aa4.21□□□□□ -1.74
CCDC144A-208ENST00000428950 JKAMPQ9P055 326 aa4.21□□□□□ -1.74
CCDC144A-208ENST00000428950 INSL6Q9Y581 213 aa4.21□□□□□ -1.74
CCDC144A-208ENST00000428950 TRGV11A0A075B6L2 103 aa4.2□□□□□ -1.74
CCDC144A-208ENST00000428950 A0A1W2PS29 197 aa4.2□□□□□ -1.74
CCDC144A-208ENST00000428950 AGFG2O95081 481 aa4.2□□□□□ -1.74
CCDC144A-208ENST00000428950 ZNF280AP59817 542 aaPredicted RBP4.2□□□□□ -1.74
CCDC144A-208ENST00000428950 PPP4R3AQ6IN85 833 aa4.2□□□□□ -1.74
CCDC144A-208ENST00000428950 GADL1Q6ZQY3 521 aa4.2□□□□□ -1.74
CCDC144A-208ENST00000428950 ZNF365Q70YC5 407 aa4.2□□□□□ -1.74
CCDC144A-208ENST00000428950 PNMA8AQ86V59 439 aaPredicted RBP4.2□□□□□ -1.74
CCDC144A-208ENST00000428950 LNX2Q8N448 690 aa4.2□□□□□ -1.74
CCDC144A-208ENST00000428950 Q8NA96 180 aa4.2□□□□□ -1.74
CCDC144A-208ENST00000428950 IL17RDQ8NFM7 739 aa4.2□□□□□ -1.74
CCDC144A-208ENST00000428950 SSH3Q8TE77 659 aa4.2□□□□□ -1.74
CCDC144A-208ENST00000428950 KAT5Q92993 513 aa4.2□□□□□ -1.74
CCDC144A-208ENST00000428950 PTCD3Q96EY7 689 aaKnown RBP4.2□□□□□ -1.74
CCDC144A-208ENST00000428950 R3HDMLQ9H3Y0 253 aa4.2□□□□□ -1.74
CCDC144A-208ENST00000428950 ALG13Q9NP73 1137 aaKnown RBP4.2□□□□□ -1.74
CCDC144A-208ENST00000428950 CALCOCO1Q9P1Z2 691 aa4.2□□□□□ -1.74
CCDC144A-208ENST00000428950 SERPINB13Q9UIV8 391 aa4.2□□□□□ -1.74
CCDC144A-208ENST00000428950 DMTF1Q9Y222 760 aa4.2□□□□□ -1.74
CCDC144A-208ENST00000428950 CDYLQ9Y232 598 aa4.2□□□□□ -1.74
CCDC144A-208ENST00000428950 CFAP20Q9Y6A4 193 aaKnown RBP4.2□□□□□ -1.74
CCDC144A-208ENST00000428950 SALL3Q9BXA9 1300 aa4.2□□□□□ -1.74
CCDC144A-208ENST00000428950 SLC43A1O75387 559 aa4.19□□□□□ -1.74
CCDC144A-208ENST00000428950 ADKP55263 362 aaKnown RBP4.19□□□□□ -1.74
CCDC144A-208ENST00000428950 EVA1CP58658 441 aa4.19□□□□□ -1.74
CCDC144A-208ENST00000428950 MRPS35P82673 323 aaKnown RBP4.19□□□□□ -1.74
CCDC144A-208ENST00000428950 ZNF169Q14929 603 aaPredicted RBP4.19□□□□□ -1.74
CCDC144A-208ENST00000428950 UAP1L1Q3KQV9 507 aa4.19□□□□□ -1.74
CCDC144A-208ENST00000428950 FLYWCH1Q4VC44 716 aa4.19□□□□□ -1.74
CCDC144A-208ENST00000428950 UTP14CQ5TAP6 766 aaKnown RBP4.19□□□□□ -1.74
CCDC144A-208ENST00000428950 EFCAB2Q5VUJ9 269 aa4.19□□□□□ -1.74
CCDC144A-208ENST00000428950 SP5Q6BEB4 398 aaPredicted RBP4.19□□□□□ -1.74
CCDC144A-208ENST00000428950 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.19□□□□□ -1.74
CCDC144A-208ENST00000428950 RD3Q7Z3Z2 195 aa4.19□□□□□ -1.74
CCDC144A-208ENST00000428950 CLNKQ7Z7G1 428 aa4.19□□□□□ -1.74
CCDC144A-208ENST00000428950 ACTRT2Q8TDY3 377 aa4.19□□□□□ -1.74
CCDC144A-208ENST00000428950 NSUN6Q8TEA1 469 aaKnown RBP4.19□□□□□ -1.74
CCDC144A-208ENST00000428950 TMEM125Q96AQ2 219 aa4.19□□□□□ -1.74
CCDC144A-208ENST00000428950 CLPTM1LQ96KA5 538 aa4.19□□□□□ -1.74
CCDC144A-208ENST00000428950 KLHL32Q96NJ5 620 aa4.19□□□□□ -1.74
CCDC144A-208ENST00000428950 SLC13A1Q9BZW2 595 aa4.19□□□□□ -1.74
CCDC144A-208ENST00000428950 PTGFRNQ9P2B2 879 aa4.19□□□□□ -1.74
CCDC144A-208ENST00000428950 TLK1Q9UKI8 766 aa4.19□□□□□ -1.74
CCDC144A-208ENST00000428950 PCDHB1Q9Y5F3 818 aa4.19□□□□□ -1.74
CCDC144A-208ENST00000428950 PRAMEF33A0A0G2JMD5 474 aa4.18□□□□□ -1.74
CCDC144A-208ENST00000428950 MGST3O14880 152 aa4.18□□□□□ -1.74
CCDC144A-208ENST00000428950 PRAMEF10O60809 474 aa4.18□□□□□ -1.74
CCDC144A-208ENST00000428950 RPLP2P05387 115 aaKnown RBP4.18□□□□□ -1.74
CCDC144A-208ENST00000428950 KCNA2P16389 499 aa4.18□□□□□ -1.74
CCDC144A-208ENST00000428950 SIM1P81133 766 aaPredicted RBP4.18□□□□□ -1.74
CCDC144A-208ENST00000428950 ZNF844Q08AG5 666 aa4.18□□□□□ -1.74
CCDC144A-208ENST00000428950 PTPN21Q16825 1174 aa4.18□□□□□ -1.74
CCDC144A-208ENST00000428950 FBXO42Q6P3S6 717 aa4.18□□□□□ -1.74
CCDC144A-208ENST00000428950 TMIEQ8NEW7 156 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms