RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 ZBTB41Q5SVQ8 909 aa18.61■□□□□ 0.57
TRIM39-209ENST00000428728 RTL10Q7L3V2 364 aa18.61■□□□□ 0.57
TRIM39-209ENST00000428728 ASCL5Q7RTU5 278 aa18.61■□□□□ 0.57
TRIM39-209ENST00000428728 RAD54LQ92698 747 aa18.61■□□□□ 0.57
TRIM39-209ENST00000428728 DDX12PQ92771 950 aa18.61■□□□□ 0.57
TRIM39-209ENST00000428728 FOXQ1Q9C009 403 aa18.61■□□□□ 0.57
TRIM39-209ENST00000428728 PARVGQ9HBI0 331 aa18.61■□□□□ 0.57
TRIM39-209ENST00000428728 KCNH3Q9ULD8 1083 aa18.61■□□□□ 0.57
TRIM39-209ENST00000428728 TBX20Q9UMR3 447 aa18.61■□□□□ 0.57
TRIM39-209ENST00000428728 USP34Q70CQ2 3546 aa18.61■□□□□ 0.57
TRIM39-209ENST00000428728 TTC26A0AVF1 554 aa18.6■□□□□ 0.57
TRIM39-209ENST00000428728 PRR23AA6NEV1 266 aa18.6■□□□□ 0.57
TRIM39-209ENST00000428728 PROB1E7EW31 1015 aa18.6■□□□□ 0.57
TRIM39-209ENST00000428728 TBC1D4O60343 1298 aa18.6■□□□□ 0.57
TRIM39-209ENST00000428728 TBCAO75347 108 aaKnown RBP18.6■□□□□ 0.57
TRIM39-209ENST00000428728 SEC24AO95486 1093 aa18.6■□□□□ 0.57
TRIM39-209ENST00000428728 CPB1P15086 417 aa18.6■□□□□ 0.57
TRIM39-209ENST00000428728 CEBPBP17676 345 aa18.6■□□□□ 0.57
TRIM39-209ENST00000428728 GUCY2FP51841 1108 aa18.6■□□□□ 0.57
TRIM39-209ENST00000428728 MRPL58Q14197 206 aaKnown RBP18.6■□□□□ 0.57
TRIM39-209ENST00000428728 APPL2Q8NEU8 664 aa18.6■□□□□ 0.57
TRIM39-209ENST00000428728 FAM212AQ96EL1 285 aa18.6■□□□□ 0.57
TRIM39-209ENST00000428728 MCRS1Q96EZ8 462 aa18.6■□□□□ 0.57
TRIM39-209ENST00000428728 CORO1BQ9BR76 489 aa18.6■□□□□ 0.57
TRIM39-209ENST00000428728 PLEKHA5Q9HAU0 1116 aa18.6■□□□□ 0.57
TRIM39-209ENST00000428728 PCDHB8Q9UN66 801 aa18.6■□□□□ 0.57
TRIM39-209ENST00000428728 INSL5Q9Y5Q6 135 aa18.6■□□□□ 0.57
TRIM39-209ENST00000428728 OGTO15294 1046 aa18.59■□□□□ 0.57
TRIM39-209ENST00000428728 TRAK2O60296 914 aa18.59■□□□□ 0.57
TRIM39-209ENST00000428728 ATF2P15336 505 aa18.59■□□□□ 0.57
TRIM39-209ENST00000428728 PTPN2P17706 415 aa18.59■□□□□ 0.57
TRIM39-209ENST00000428728 MARCKSP29966 332 aaPredicted RBP18.59■□□□□ 0.57
TRIM39-209ENST00000428728 ZNF131P52739 623 aa18.59■□□□□ 0.57
TRIM39-209ENST00000428728 ENOX2Q16206 610 aaKnown RBP18.59■□□□□ 0.57
TRIM39-209ENST00000428728 PHLDB3Q6NSJ2 640 aa18.59■□□□□ 0.57
TRIM39-209ENST00000428728 TCEAL8Q8IYN2 117 aa18.59■□□□□ 0.57
TRIM39-209ENST00000428728 LARP4BQ92615 738 aaKnown RBP18.59■□□□□ 0.57
TRIM39-209ENST00000428728 RPF1Q9H9Y2 349 aaKnown RBP18.59■□□□□ 0.57
TRIM39-209ENST00000428728 UBQLN1Q9UMX0 589 aaKnown RBP18.59■□□□□ 0.57
TRIM39-209ENST00000428728 SIT1Q9Y3P8 196 aa18.59■□□□□ 0.57
TRIM39-209ENST00000428728 TIMM13Q9Y5L4 95 aaPredicted RBP18.59■□□□□ 0.57
TRIM39-209ENST00000428728 COL4A2P08572 1712 aa18.59■□□□□ 0.57
TRIM39-209ENST00000428728 LACTBL1A8MY62 500 aa18.58■□□□□ 0.56
TRIM39-209ENST00000428728 FAM189A1O60320 539 aa18.58■□□□□ 0.56
TRIM39-209ENST00000428728 NMT1P30419 496 aaKnown RBP18.58■□□□□ 0.56
TRIM39-209ENST00000428728 YWHAHQ04917 246 aaPredicted RBP18.58■□□□□ 0.56
TRIM39-209ENST00000428728 ADCY1Q08828 1119 aa18.58■□□□□ 0.56
TRIM39-209ENST00000428728 SNW1Q13573 536 aaKnown RBP18.58■□□□□ 0.56
TRIM39-209ENST00000428728 TPGS2Q68CL5 300 aa18.58■□□□□ 0.56
TRIM39-209ENST00000428728 SLC39A4Q6P5W5 647 aa18.58■□□□□ 0.56
TRIM39-209ENST00000428728 PJA1Q8NG27 643 aa18.58■□□□□ 0.56
TRIM39-209ENST00000428728 NKD2Q969F2 451 aaPredicted RBP18.58■□□□□ 0.56
TRIM39-209ENST00000428728 TCEAL4Q96EI5 215 aa18.58■□□□□ 0.56
TRIM39-209ENST00000428728 MSTO1Q9BUK6 570 aa18.58■□□□□ 0.56
TRIM39-209ENST00000428728 CLIC4Q9Y696 253 aa18.58■□□□□ 0.56
TRIM39-209ENST00000428728 CACNA1IQ9P0X4 2223 aa18.58■□□□□ 0.56
TRIM39-209ENST00000428728 NUP210Q8TEM1 1887 aaPredicted RBP18.58■□□□□ 0.56
TRIM39-209ENST00000428728 XPOTO43592 962 aaKnown RBP18.57■□□□□ 0.56
TRIM39-209ENST00000428728 PIGRP01833 764 aa18.57■□□□□ 0.56
TRIM39-209ENST00000428728 LRPAP1P30533 357 aa18.57■□□□□ 0.56
TRIM39-209ENST00000428728 TWF1Q12792 350 aa18.57■□□□□ 0.56
TRIM39-209ENST00000428728 CUL4AQ13619 759 aa18.57■□□□□ 0.56
TRIM39-209ENST00000428728 MLF2Q15773 248 aaPredicted RBP18.57■□□□□ 0.56
TRIM39-209ENST00000428728 KYAT1Q16773 422 aa18.57■□□□□ 0.56
TRIM39-209ENST00000428728 JADE1Q6IE81 842 aa18.57■□□□□ 0.56
TRIM39-209ENST00000428728 RNF19BQ6ZMZ0 732 aa18.57■□□□□ 0.56
TRIM39-209ENST00000428728 USP49Q70CQ1 688 aa18.57■□□□□ 0.56
TRIM39-209ENST00000428728 ELMOD1Q8N336 334 aa18.57■□□□□ 0.56
TRIM39-209ENST00000428728 KCNN1Q92952 543 aa18.57■□□□□ 0.56
TRIM39-209ENST00000428728 EPSTI1Q96J88 318 aa18.57■□□□□ 0.56
TRIM39-209ENST00000428728 AFF4Q9UHB7 1163 aaKnown RBP18.57■□□□□ 0.56
TRIM39-209ENST00000428728 MYO15AQ9UKN7 3530 aa18.57■□□□□ 0.56
TRIM39-209ENST00000428728 A0A0B4J269 797 aa18.56■□□□□ 0.56
TRIM39-209ENST00000428728 TISP43B9A030 160 aa18.56■□□□□ 0.56
TRIM39-209ENST00000428728 M0QZQ0 153 aa18.56■□□□□ 0.56
TRIM39-209ENST00000428728 PPEF2O14830 753 aa18.56■□□□□ 0.56
TRIM39-209ENST00000428728 LRRN2O75325 713 aa18.56■□□□□ 0.56
TRIM39-209ENST00000428728 OR4Q2P0C623 313 aa18.56■□□□□ 0.56
TRIM39-209ENST00000428728 CYP3A5P20815 502 aa18.56■□□□□ 0.56
TRIM39-209ENST00000428728 STARD6P59095 220 aa18.56■□□□□ 0.56
TRIM39-209ENST00000428728 ZBTB6Q15916 424 aa18.56■□□□□ 0.56
TRIM39-209ENST00000428728 ZC2HC1CQ53FD0 456 aaPredicted RBP18.56■□□□□ 0.56
TRIM39-209ENST00000428728 PRSS36Q5K4E3 855 aa18.56■□□□□ 0.56
TRIM39-209ENST00000428728 POTEHQ6S545 545 aa18.56■□□□□ 0.56
TRIM39-209ENST00000428728 DSTYKQ6XUX3 929 aa18.56■□□□□ 0.56
TRIM39-209ENST00000428728 PDZD4Q76G19 769 aaPredicted RBP18.56■□□□□ 0.56
TRIM39-209ENST00000428728 USP37Q86T82 979 aa18.56■□□□□ 0.56
TRIM39-209ENST00000428728 MAP4K3Q8IVH8 894 aa18.56■□□□□ 0.56
TRIM39-209ENST00000428728 HS6ST3Q8IZP7 471 aa18.56■□□□□ 0.56
TRIM39-209ENST00000428728 SHDQ96IW2 340 aa18.56■□□□□ 0.56
TRIM39-209ENST00000428728 PGLYRP2Q96PD5 576 aa18.56■□□□□ 0.56
TRIM39-209ENST00000428728 FIZ1Q96SL8 496 aa18.56■□□□□ 0.56
TRIM39-209ENST00000428728 PLA2G2FQ9BZM2 168 aa18.56■□□□□ 0.56
TRIM39-209ENST00000428728 CCSER1Q9C0I3 900 aa18.56■□□□□ 0.56
TRIM39-209ENST00000428728 AVENQ9NQS1 362 aaPredicted RBP18.56■□□□□ 0.56
TRIM39-209ENST00000428728 GDE1Q9NZC3 331 aa18.56■□□□□ 0.56
TRIM39-209ENST00000428728 ZFHX2Q9C0A1 2572 aaPredicted RBP18.56■□□□□ 0.56
TRIM39-209ENST00000428728 KIF26AQ9ULI4 1882 aaPredicted RBP18.55■□□□□ 0.56
TRIM39-209ENST00000428728 ANKRD63C9JTQ0 380 aa18.55■□□□□ 0.56
TRIM39-209ENST00000428728 NRG2O14511 850 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms