RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 ITIH3Q06033 890 aa18.11■□□□□ 0.49
VRK2-204ENST00000428021 STK4Q13043 487 aa18.11■□□□□ 0.49
VRK2-204ENST00000428021 TMEM132DQ14C87 1099 aa18.11■□□□□ 0.49
VRK2-204ENST00000428021 ARMCX5Q6P1M9 558 aa18.11■□□□□ 0.49
VRK2-204ENST00000428021 PDXDC1Q6P996 788 aa18.11■□□□□ 0.49
VRK2-204ENST00000428021 SPATA31D4Q6ZUB0 917 aa18.11■□□□□ 0.49
VRK2-204ENST00000428021 BRSK2Q8IWQ3 736 aa18.11■□□□□ 0.49
VRK2-204ENST00000428021 NELFCDQ8IXH7 590 aa18.11■□□□□ 0.49
VRK2-204ENST00000428021 EFCAB13Q8IY85 973 aa18.11■□□□□ 0.49
VRK2-204ENST00000428021 KIAA0895Q8NCT3 520 aa18.11■□□□□ 0.49
VRK2-204ENST00000428021 MAN1C1Q9NR34 630 aa18.11■□□□□ 0.49
VRK2-204ENST00000428021 MTRRQ9UBK8 725 aa18.11■□□□□ 0.49
VRK2-204ENST00000428021 C2CD2Q9Y426 696 aa18.11■□□□□ 0.49
VRK2-204ENST00000428021 NUB1Q9Y5A7 615 aa18.11■□□□□ 0.49
VRK2-204ENST00000428021 UBE4BO95155 1302 aa18.11■□□□□ 0.49
VRK2-204ENST00000428021 ANO9A1A5B4 782 aa18.1■□□□□ 0.49
VRK2-204ENST00000428021 SYN3O14994 580 aa18.1■□□□□ 0.49
VRK2-204ENST00000428021 IL18RAPO95256 599 aa18.1■□□□□ 0.49
VRK2-204ENST00000428021 WEE2P0C1S8 567 aa18.1■□□□□ 0.49
VRK2-204ENST00000428021 AARSP49588 968 aaKnown RBP eCLIP18.1■□□□□ 0.49
VRK2-204ENST00000428021 DPYDQ12882 1025 aa18.1■□□□□ 0.49
VRK2-204ENST00000428021 MRPL58Q14197 206 aaKnown RBP18.1■□□□□ 0.49
VRK2-204ENST00000428021 CBX2Q14781 532 aaPredicted RBP18.1■□□□□ 0.49
VRK2-204ENST00000428021 TMC5Q6UXY8 1006 aa18.1■□□□□ 0.49
VRK2-204ENST00000428021 FMR1NBQ8N0W7 255 aaPredicted RBP18.1■□□□□ 0.49
VRK2-204ENST00000428021 GJD3Q8N144 294 aa18.1■□□□□ 0.49
VRK2-204ENST00000428021 BEST2Q8NFU1 509 aa18.1■□□□□ 0.49
VRK2-204ENST00000428021 SFXN1Q9H9B4 322 aa18.1■□□□□ 0.49
VRK2-204ENST00000428021 AGPAT3Q9NRZ7 376 aa18.1■□□□□ 0.49
VRK2-204ENST00000428021 EXOC1Q9NV70 894 aa18.1■□□□□ 0.49
VRK2-204ENST00000428021 BACE2Q9Y5Z0 518 aa18.1■□□□□ 0.49
VRK2-204ENST00000428021 SCN1AP35498 2009 aa18.1■□□□□ 0.49
VRK2-204ENST00000428021 PIRO00625 290 aa18.09■□□□□ 0.49
VRK2-204ENST00000428021 KIAA0391O15091 583 aaKnown RBP18.09■□□□□ 0.49
VRK2-204ENST00000428021 TBC1D4O60343 1298 aa18.09■□□□□ 0.49
VRK2-204ENST00000428021 PAPLNO95428 1278 aa18.09■□□□□ 0.49
VRK2-204ENST00000428021 RPN1P04843 607 aaKnown RBP18.09■□□□□ 0.49
VRK2-204ENST00000428021 MCM4P33991 863 aa18.09■□□□□ 0.49
VRK2-204ENST00000428021 PSMD2Q13200 908 aa18.09■□□□□ 0.49
VRK2-204ENST00000428021 SNW1Q13573 536 aaKnown RBP18.09■□□□□ 0.49
VRK2-204ENST00000428021 RAB33AQ14088 237 aa18.09■□□□□ 0.49
VRK2-204ENST00000428021 VARS2Q5ST30 1063 aaKnown RBP18.09■□□□□ 0.49
VRK2-204ENST00000428021 C9orf57Q5W0N0 161 aa18.09■□□□□ 0.49
VRK2-204ENST00000428021 CES5AQ6NT32 575 aa18.09■□□□□ 0.49
VRK2-204ENST00000428021 ANKS3Q6ZW76 656 aa18.09■□□□□ 0.49
VRK2-204ENST00000428021 GPD1LQ8N335 351 aa18.09■□□□□ 0.49
VRK2-204ENST00000428021 ENGASEQ8NFI3 743 aa18.09■□□□□ 0.49
VRK2-204ENST00000428021 CMASQ8NFW8 434 aaPredicted RBP18.09■□□□□ 0.49
VRK2-204ENST00000428021 HDAC7Q8WUI4 952 aa18.09■□□□□ 0.49
VRK2-204ENST00000428021 KHSRPQ92945 711 aaKnown RBP eCLIP18.09■□□□□ 0.496e-7■■■■□ 19.8
VRK2-204ENST00000428021 PHF7Q9BWX1 381 aaPredicted RBP18.09■□□□□ 0.49
VRK2-204ENST00000428021 RBAKQ9NYW8 714 aaPredicted RBP18.09■□□□□ 0.49
VRK2-204ENST00000428021 HSPBP1Q9NZL4 362 aa18.09■□□□□ 0.49
VRK2-204ENST00000428021 C2orf16Q68DN1 1984 aa18.08■□□□□ 0.49
VRK2-204ENST00000428021 M0QZQ0 153 aa18.08■□□□□ 0.48
VRK2-204ENST00000428021 SPTLC1O15269 473 aa18.08■□□□□ 0.48
VRK2-204ENST00000428021 OR1D2P34982 312 aa18.08■□□□□ 0.48
VRK2-204ENST00000428021 LILRA4P59901 499 aa18.08■□□□□ 0.48
VRK2-204ENST00000428021 SNRPFP62306 86 aaKnown RBP18.08■□□□□ 0.48
VRK2-204ENST00000428021 KNOP1Q1ED39 458 aaKnown RBP18.08■□□□□ 0.48
VRK2-204ENST00000428021 GPR149Q86SP6 731 aa18.08■□□□□ 0.48
VRK2-204ENST00000428021 NT5DC4Q86YG4 428 aa18.08■□□□□ 0.48
VRK2-204ENST00000428021 KREMEN2Q8NCW0 462 aa18.08■□□□□ 0.48
VRK2-204ENST00000428021 PLEKHA4Q9H4M7 779 aa18.08■□□□□ 0.48
VRK2-204ENST00000428021 POMKQ9H5K3 350 aa18.08■□□□□ 0.48
VRK2-204ENST00000428021 DPP3Q9NY33 737 aa18.08■□□□□ 0.48
VRK2-204ENST00000428021 FBXW11Q9UKB1 542 aa18.08■□□□□ 0.48
VRK2-204ENST00000428021 PCDHB8Q9UN66 801 aa18.08■□□□□ 0.48
VRK2-204ENST00000428021 LOC730098B7Z3J9 87 aa18.07■□□□□ 0.48
VRK2-204ENST00000428021 CLIC2O15247 247 aa18.07■□□□□ 0.48
VRK2-204ENST00000428021 RFPL2O75678 378 aa18.07■□□□□ 0.48
VRK2-204ENST00000428021 RHOBTB3O94955 611 aa18.07■□□□□ 0.48
VRK2-204ENST00000428021 SSTR3P32745 418 aaPredicted RBP18.07■□□□□ 0.48
VRK2-204ENST00000428021 MTHFRP42898 656 aa18.07■□□□□ 0.48
VRK2-204ENST00000428021 SCARA3Q6AZY7 606 aa18.07■□□□□ 0.48
VRK2-204ENST00000428021 CBWD2Q8IUF1 395 aa18.07■□□□□ 0.48
VRK2-204ENST00000428021 NOC3LQ8WTT2 800 aaKnown RBP18.07■□□□□ 0.48
VRK2-204ENST00000428021 FAM84AQ96KN4 292 aa18.07■□□□□ 0.48
VRK2-204ENST00000428021 POP1Q99575 1024 aaKnown RBP18.07■□□□□ 0.48
VRK2-204ENST00000428021 PDE11AQ9HCR9 933 aa18.07■□□□□ 0.48
VRK2-204ENST00000428021 DPP7Q9UHL4 492 aa18.07■□□□□ 0.48
VRK2-204ENST00000428021 CDY1Q9Y6F8 540 aa18.07■□□□□ 0.48
VRK2-204ENST00000428021 CCDC195A0A1B0GUA6 201 aa18.06■□□□□ 0.48
VRK2-204ENST00000428021 GOLGA6L4A6NEF3 574 aa18.06■□□□□ 0.48
VRK2-204ENST00000428021 ZNF233A6NK53 670 aa18.06■□□□□ 0.48
VRK2-204ENST00000428021 ATAT1Q5SQI0 421 aa18.06■□□□□ 0.48
VRK2-204ENST00000428021 SLC8B1Q6J4K2 584 aa18.06■□□□□ 0.48
VRK2-204ENST00000428021 C15orf39Q6ZRI6 1047 aa18.06■□□□□ 0.48
VRK2-204ENST00000428021 HS2ST1Q7LGA3 356 aa18.06■□□□□ 0.48
VRK2-204ENST00000428021 C12orf56Q8IXR9 622 aa18.06■□□□□ 0.48
VRK2-204ENST00000428021 APPL2Q8NEU8 664 aa18.06■□□□□ 0.48
VRK2-204ENST00000428021 CXorf38Q8TB03 319 aa18.06■□□□□ 0.48
VRK2-204ENST00000428021 ZNF707Q96C28 371 aaPredicted RBP18.06■□□□□ 0.48
VRK2-204ENST00000428021 RIPOR3Q96MK2 946 aa18.06■□□□□ 0.48
VRK2-204ENST00000428021 NECTIN4Q96NY8 510 aa18.06■□□□□ 0.48
VRK2-204ENST00000428021 RHOBTB2Q9BYZ6 727 aa18.06■□□□□ 0.48
VRK2-204ENST00000428021 KCTD10Q9H3F6 313 aa18.06■□□□□ 0.48
VRK2-204ENST00000428021 KIAA1586Q9HCI6 787 aa18.06■□□□□ 0.48
VRK2-204ENST00000428021 CGNQ9P2M7 1197 aaKnown RBP18.06■□□□□ 0.48
VRK2-204ENST00000428021 TIMM13Q9Y5L4 95 aaPredicted RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms