RNA–Protein interactions for RNA: ENST00000427487.5

HDLBP-215, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 924 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-215ENST00000427487 GDAP2Q9NXN4 497 aa12.98□□□□□ -0.33
HDLBP-215ENST00000427487 APEX2Q9UBZ4 518 aa12.98□□□□□ -0.33
HDLBP-215ENST00000427487 STK39Q9UEW8 545 aa12.98□□□□□ -0.33
HDLBP-215ENST00000427487 PLAGL2Q9UPG8 496 aa12.98□□□□□ -0.33
HDLBP-215ENST00000427487 SLC4A7Q9Y6M7 1214 aa12.98□□□□□ -0.33
HDLBP-215ENST00000427487 CST3P01034 146 aaPredicted RBP12.97□□□□□ -0.33
HDLBP-215ENST00000427487 ITGB3P05106 788 aa12.97□□□□□ -0.33
HDLBP-215ENST00000427487 FGFR1P11362 822 aa12.97□□□□□ -0.33
HDLBP-215ENST00000427487 MAGEA10P43363 369 aaPredicted RBP12.97□□□□□ -0.33
HDLBP-215ENST00000427487 AARSP49588 968 aaKnown RBP eCLIP12.97□□□□□ -0.33
HDLBP-215ENST00000427487 EPHB4P54760 987 aa12.97□□□□□ -0.33
HDLBP-215ENST00000427487 NOP14P78316 857 aaKnown RBP12.97□□□□□ -0.33
HDLBP-215ENST00000427487 DEFB103AP81534 67 aa12.97□□□□□ -0.33
HDLBP-215ENST00000427487 ARID5BQ14865 1188 aa12.97□□□□□ -0.33
HDLBP-215ENST00000427487 UPP1Q16831 310 aa12.97□□□□□ -0.33
HDLBP-215ENST00000427487 SV2CQ496J9 727 aa12.97□□□□□ -0.33
HDLBP-215ENST00000427487 GLRA4Q5JXX5 417 aa12.97□□□□□ -0.33
HDLBP-215ENST00000427487 KLHDC7AQ5VTJ3 777 aa12.97□□□□□ -0.33
HDLBP-215ENST00000427487 LMBRD2Q68DH5 695 aaPredicted RBP12.97□□□□□ -0.33
HDLBP-215ENST00000427487 DCLRE1AQ6PJP8 1040 aa12.97□□□□□ -0.33
HDLBP-215ENST00000427487 COLGALT2Q8IYK4 626 aa12.97□□□□□ -0.33
HDLBP-215ENST00000427487 NEK11Q8NG66 645 aa12.97□□□□□ -0.33
HDLBP-215ENST00000427487 SEMA4DQ92854 862 aa12.97□□□□□ -0.33
HDLBP-215ENST00000427487 C18orf25Q96B23 403 aaPredicted RBP12.97□□□□□ -0.33
HDLBP-215ENST00000427487 FAM193BQ96PV7 902 aaPredicted RBP12.97□□□□□ -0.33
HDLBP-215ENST00000427487 TTYH3Q9C0H2 523 aa12.97□□□□□ -0.33
HDLBP-215ENST00000427487 CYP3A43Q9HB55 503 aa12.97□□□□□ -0.33
HDLBP-215ENST00000427487 CEP72Q9P209 647 aa12.97□□□□□ -0.33
HDLBP-215ENST00000427487 TUBGCP4Q9UGJ1 667 aa12.97□□□□□ -0.33
HDLBP-215ENST00000427487 INSL6Q9Y581 213 aa12.97□□□□□ -0.33
HDLBP-215ENST00000427487 TBKBP1A7MCY6 615 aa12.96□□□□□ -0.33
HDLBP-215ENST00000427487 GOLGA6L6A8MZA4 724 aa12.96□□□□□ -0.33
HDLBP-215ENST00000427487 NOL4O94818 638 aa12.96□□□□□ -0.33
HDLBP-215ENST00000427487 POMCP01189 267 aa12.96□□□□□ -0.33
HDLBP-215ENST00000427487 TPM1P09493 284 aa12.96□□□□□ -0.33
HDLBP-215ENST00000427487 UCHL3P15374 230 aa12.96□□□□□ -0.33
HDLBP-215ENST00000427487 TRIM21P19474 475 aaKnown RBP12.96□□□□□ -0.33
HDLBP-215ENST00000427487 SLC9A1P19634 815 aa12.96□□□□□ -0.33
HDLBP-215ENST00000427487 POLR2BP30876 1174 aaKnown RBP12.96□□□□□ -0.33
HDLBP-215ENST00000427487 TAF6P49848 677 aa12.96□□□□□ -0.33
HDLBP-215ENST00000427487 AFF1P51825 1210 aaKnown RBP12.96□□□□□ -0.33
HDLBP-215ENST00000427487 YWHAEP62258 255 aaKnown RBP12.96□□□□□ -0.33
HDLBP-215ENST00000427487 RNASELQ05823 741 aaKnown RBP12.96□□□□□ -0.33
HDLBP-215ENST00000427487 SOX4Q06945 474 aaPredicted RBP12.96□□□□□ -0.33
HDLBP-215ENST00000427487 TBX2Q13207 712 aaPredicted RBP12.96□□□□□ -0.33
HDLBP-215ENST00000427487 ZNF699Q32M78 642 aa12.96□□□□□ -0.33
HDLBP-215ENST00000427487 ZNF667Q5HYK9 610 aa12.96□□□□□ -0.33
HDLBP-215ENST00000427487 LIMS2Q7Z4I7 341 aa12.96□□□□□ -0.33
HDLBP-215ENST00000427487 SP7Q8TDD2 431 aaPredicted RBP12.96□□□□□ -0.33
HDLBP-215ENST00000427487 HPDLQ96IR7 371 aa12.96□□□□□ -0.33
HDLBP-215ENST00000427487 RAD9AQ99638 391 aa12.96□□□□□ -0.33
HDLBP-215ENST00000427487 CRACR2AQ9BSW2 395 aa12.96□□□□□ -0.33
HDLBP-215ENST00000427487 NAA15Q9BXJ9 866 aaKnown RBP12.96□□□□□ -0.33
HDLBP-215ENST00000427487 NIF3L1Q9GZT8 377 aa12.96□□□□□ -0.33
HDLBP-215ENST00000427487 CXCL16Q9H2A7 254 aa12.96□□□□□ -0.33
HDLBP-215ENST00000427487 GANQ9H2C0 597 aa12.96□□□□□ -0.33
HDLBP-215ENST00000427487 MMRN2Q9H8L6 949 aa12.96□□□□□ -0.33
HDLBP-215ENST00000427487 SIX2Q9NPC8 291 aa12.96□□□□□ -0.33
HDLBP-215ENST00000427487 CAPN11Q9UMQ6 739 aa12.96□□□□□ -0.33
HDLBP-215ENST00000427487 AGAP1Q9UPQ3 857 aa12.96□□□□□ -0.33
HDLBP-215ENST00000427487 INPP5FQ9Y2H2 1132 aa12.96□□□□□ -0.33
HDLBP-215ENST00000427487 ZBBXA8MT70 800 aa12.95□□□□□ -0.34
HDLBP-215ENST00000427487 PODXLO00592 558 aa12.95□□□□□ -0.34
HDLBP-215ENST00000427487 ALDH2P05091 517 aa12.95□□□□□ -0.34
HDLBP-215ENST00000427487 KRT19P08727 400 aa12.95□□□□□ -0.34
HDLBP-215ENST00000427487 ATP2A2P16615 1042 aaKnown RBP12.95□□□□□ -0.34
HDLBP-215ENST00000427487 MFAP3P55082 362 aa12.95□□□□□ -0.34
HDLBP-215ENST00000427487 LILRA4P59901 499 aa12.95□□□□□ -0.34
HDLBP-215ENST00000427487 MYL6P60660 151 aa12.95□□□□□ -0.34
HDLBP-215ENST00000427487 ELAVL2Q12926 359 aaKnown RBP12.95□□□□□ -0.34
HDLBP-215ENST00000427487 PHLDB3Q6NSJ2 640 aa12.95□□□□□ -0.34
HDLBP-215ENST00000427487 CNGA4Q8IV77 575 aa12.95□□□□□ -0.34
HDLBP-215ENST00000427487 HERC6Q8IVU3 1022 aa12.95□□□□□ -0.34
HDLBP-215ENST00000427487 TOP6BLQ8N6T0 577 aa12.95□□□□□ -0.34
HDLBP-215ENST00000427487 ZNF397Q8NF99 534 aaPredicted RBP12.95□□□□□ -0.34
HDLBP-215ENST00000427487 SYN2Q92777 582 aaPredicted RBP12.95□□□□□ -0.34
HDLBP-215ENST00000427487 CLP1Q92989 425 aaKnown RBP12.95□□□□□ -0.34
HDLBP-215ENST00000427487 COLEC11Q9BWP8 271 aa12.95□□□□□ -0.34
HDLBP-215ENST00000427487 LSM14BQ9BX40 385 aaKnown RBP12.95□□□□□ -0.34
HDLBP-215ENST00000427487 STK33Q9BYT3 514 aa12.95□□□□□ -0.34
HDLBP-215ENST00000427487 BCO2Q9BYV7 579 aa12.95□□□□□ -0.34
HDLBP-215ENST00000427487 NRDE2Q9H7Z3 1164 aa12.95□□□□□ -0.34
HDLBP-215ENST00000427487 CNTN6Q9UQ52 1028 aa12.95□□□□□ -0.34
HDLBP-215ENST00000427487 RWDD3Q9Y3V2 267 aa12.95□□□□□ -0.34
HDLBP-215ENST00000427487 PTPRSQ13332 1948 aa12.94□□□□□ -0.34
HDLBP-215ENST00000427487 KPNA7A9QM74 516 aa12.94□□□□□ -0.34
HDLBP-215ENST00000427487 M0QZQ0 153 aa12.94□□□□□ -0.34
HDLBP-215ENST00000427487 TRAPPC3O43617 180 aa12.94□□□□□ -0.34
HDLBP-215ENST00000427487 TACC1O75410 805 aa12.94□□□□□ -0.34
HDLBP-215ENST00000427487 DDHD2O94830 711 aa12.94□□□□□ -0.34
HDLBP-215ENST00000427487 LAG3P18627 525 aa12.94□□□□□ -0.34
HDLBP-215ENST00000427487 PPM1AP35813 382 aa12.94□□□□□ -0.34
HDLBP-215ENST00000427487 CLCNKBP51801 687 aa12.94□□□□□ -0.34
HDLBP-215ENST00000427487 GSDMDP57764 484 aa12.94□□□□□ -0.34
HDLBP-215ENST00000427487 ZBED6P86452 979 aa12.94□□□□□ -0.34
HDLBP-215ENST00000427487 CCDC173Q0VFZ6 552 aa12.94□□□□□ -0.34
HDLBP-215ENST00000427487 CUL2Q13617 745 aa12.94□□□□□ -0.34
HDLBP-215ENST00000427487 WDR72Q3MJ13 1102 aa12.94□□□□□ -0.34
HDLBP-215ENST00000427487 PPFIBP1Q86W92 1011 aa12.94□□□□□ -0.34
HDLBP-215ENST00000427487 ZNF280BQ86YH2 543 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms