RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 PDZD4Q76G19 769 aaPredicted RBP11.15□□□□□ -0.62
HDLBP-213ENST00000427007 TCEAL8Q8IYN2 117 aa11.15□□□□□ -0.62
HDLBP-213ENST00000427007 KIAA2013Q8IYS2 634 aa11.15□□□□□ -0.62
HDLBP-213ENST00000427007 HS6ST3Q8IZP7 471 aa11.15□□□□□ -0.62
HDLBP-213ENST00000427007 SYT2Q8N9I0 419 aaPredicted RBP11.15□□□□□ -0.62
HDLBP-213ENST00000427007 TMEM161BQ8NDZ6 487 aa11.15□□□□□ -0.62
HDLBP-213ENST00000427007 ELSPBP1Q96BH3 223 aa11.15□□□□□ -0.62
HDLBP-213ENST00000427007 BICD1Q96G01 975 aa11.15□□□□□ -0.62
HDLBP-213ENST00000427007 CDK5RAP3Q96JB5 506 aa11.15□□□□□ -0.62
HDLBP-213ENST00000427007 SUSD3Q96L08 255 aa11.15□□□□□ -0.62
HDLBP-213ENST00000427007 NTPCRQ9BSD7 190 aaKnown RBP11.15□□□□□ -0.62
HDLBP-213ENST00000427007 TIPINQ9BVW5 301 aa11.15□□□□□ -0.62
HDLBP-213ENST00000427007 HAPLN2Q9GZV7 340 aa11.15□□□□□ -0.62
HDLBP-213ENST00000427007 AVENQ9NQS1 362 aaPredicted RBP11.15□□□□□ -0.62
HDLBP-213ENST00000427007 GDE1Q9NZC3 331 aa11.15□□□□□ -0.62
HDLBP-213ENST00000427007 TICRRQ7Z2Z1 1910 aa11.15□□□□□ -0.62
HDLBP-213ENST00000427007 COL4A2P08572 1712 aa11.15□□□□□ -0.63
HDLBP-213ENST00000427007 CLDN3O15551 220 aa11.14□□□□□ -0.63
HDLBP-213ENST00000427007 OR4Q2P0C623 313 aa11.14□□□□□ -0.63
HDLBP-213ENST00000427007 PLA2G4BP0C869 781 aa11.14□□□□□ -0.63
HDLBP-213ENST00000427007 GJA1P17302 382 aa11.14□□□□□ -0.63
HDLBP-213ENST00000427007 FCARP24071 287 aa11.14□□□□□ -0.63
HDLBP-213ENST00000427007 TNFSF9P41273 254 aa11.14□□□□□ -0.63
HDLBP-213ENST00000427007 SMTNP53814 917 aa11.14□□□□□ -0.63
HDLBP-213ENST00000427007 SLC12A3P55017 1021 aa11.14□□□□□ -0.63
HDLBP-213ENST00000427007 TWF1Q12792 350 aa11.14□□□□□ -0.63
HDLBP-213ENST00000427007 RILPL1Q5EBL4 403 aa11.14□□□□□ -0.63
HDLBP-213ENST00000427007 FAM78AQ5JUQ0 283 aa11.14□□□□□ -0.63
HDLBP-213ENST00000427007 ZBTB41Q5SVQ8 909 aa11.14□□□□□ -0.63
HDLBP-213ENST00000427007 HYIQ5T013 277 aa11.14□□□□□ -0.63
HDLBP-213ENST00000427007 RNF19BQ6ZMZ0 732 aa11.14□□□□□ -0.63
HDLBP-213ENST00000427007 ELMOD1Q8N336 334 aa11.14□□□□□ -0.63
HDLBP-213ENST00000427007 DCLK2Q8N568 766 aa11.14□□□□□ -0.63
HDLBP-213ENST00000427007 SPIRE2Q8WWL2 714 aa11.14□□□□□ -0.63
HDLBP-213ENST00000427007 CEP72Q9P209 647 aa11.14□□□□□ -0.63
HDLBP-213ENST00000427007 PCDHB8Q9UN66 801 aa11.14□□□□□ -0.63
HDLBP-213ENST00000427007 TIMM13Q9Y5L4 95 aaPredicted RBP11.14□□□□□ -0.63
HDLBP-213ENST00000427007 DCHS1Q96JQ0 3298 aa11.13□□□□□ -0.63
HDLBP-213ENST00000427007 H3BQV1 296 aa11.13□□□□□ -0.63
HDLBP-213ENST00000427007 ZNF197O14709 1029 aa11.13□□□□□ -0.63
HDLBP-213ENST00000427007 KINO60870 393 aaKnown RBP11.13□□□□□ -0.63
HDLBP-213ENST00000427007 MYL4P12829 197 aa11.13□□□□□ -0.63
HDLBP-213ENST00000427007 GJB2P29033 226 aa11.13□□□□□ -0.63
HDLBP-213ENST00000427007 MARCKSP29966 332 aaPredicted RBP11.13□□□□□ -0.63
HDLBP-213ENST00000427007 GUCY2FP51841 1108 aa11.13□□□□□ -0.63
HDLBP-213ENST00000427007 NCKAP1LP55160 1127 aa11.13□□□□□ -0.63
HDLBP-213ENST00000427007 FOXK2Q01167 660 aa11.13□□□□□ -0.63
HDLBP-213ENST00000427007 YWHAHQ04917 246 aaPredicted RBP11.13□□□□□ -0.63
HDLBP-213ENST00000427007 CSTF1Q05048 431 aaKnown RBP11.13□□□□□ -0.63
HDLBP-213ENST00000427007 MCL1Q07820 350 aa11.13□□□□□ -0.63
HDLBP-213ENST00000427007 DHX8Q14562 1220 aaKnown RBP11.13□□□□□ -0.63
HDLBP-213ENST00000427007 ARSHQ5FYA8 562 aa11.13□□□□□ -0.63
HDLBP-213ENST00000427007 CYP4A22Q5TCH4 519 aa11.13□□□□□ -0.63
HDLBP-213ENST00000427007 TPGS2Q68CL5 300 aa11.13□□□□□ -0.63
HDLBP-213ENST00000427007 IQCEQ6IPM2 695 aa11.13□□□□□ -0.63
HDLBP-213ENST00000427007 TSSK4Q6SA08 328 aa11.13□□□□□ -0.63
HDLBP-213ENST00000427007 ZPBP2Q6X784 338 aa11.13□□□□□ -0.63
HDLBP-213ENST00000427007 APPL2Q8NEU8 664 aa11.13□□□□□ -0.63
HDLBP-213ENST00000427007 KIF12Q96FN5 646 aa11.13□□□□□ -0.63
HDLBP-213ENST00000427007 ZNF512Q96ME7 567 aaPredicted RBP11.13□□□□□ -0.63
HDLBP-213ENST00000427007 ZSWIM3Q96MP5 696 aa11.13□□□□□ -0.63
HDLBP-213ENST00000427007 PGLYRP2Q96PD5 576 aa11.13□□□□□ -0.63
HDLBP-213ENST00000427007 OSBPL6Q9BZF3 934 aa11.13□□□□□ -0.63
HDLBP-213ENST00000427007 BRD9Q9H8M2 597 aa11.13□□□□□ -0.63
HDLBP-213ENST00000427007 ZFP14Q9HCL3 533 aa11.13□□□□□ -0.63
HDLBP-213ENST00000427007 AFF4Q9UHB7 1163 aaKnown RBP11.13□□□□□ -0.63
HDLBP-213ENST00000427007 NDRG2Q9UN36 371 aaKnown RBP11.13□□□□□ -0.63
HDLBP-213ENST00000427007 KIF3AQ9Y496 699 aa11.13□□□□□ -0.63
HDLBP-213ENST00000427007 ANK1P16157 1881 aa11.12□□□□□ -0.63
HDLBP-213ENST00000427007 TSC2P49815 1807 aa11.12□□□□□ -0.63
HDLBP-213ENST00000427007 TTC26A0AVF1 554 aa11.12□□□□□ -0.63
HDLBP-213ENST00000427007 SHISA7A6NL88 538 aa11.12□□□□□ -0.63
HDLBP-213ENST00000427007 MOSPD3O75425 235 aa11.12□□□□□ -0.63
HDLBP-213ENST00000427007 LRPAP1P30533 357 aa11.12□□□□□ -0.63
HDLBP-213ENST00000427007 GDI1P31150 447 aa11.12□□□□□ -0.63
HDLBP-213ENST00000427007 VIPR2P41587 438 aa11.12□□□□□ -0.63
HDLBP-213ENST00000427007 LIG4P49917 911 aa11.12□□□□□ -0.63
HDLBP-213ENST00000427007 PPP2R3AQ06190 1150 aa11.12□□□□□ -0.63
HDLBP-213ENST00000427007 TMEM119Q4V9L6 283 aa11.12□□□□□ -0.63
HDLBP-213ENST00000427007 VITQ6UXI7 678 aa11.12□□□□□ -0.63
HDLBP-213ENST00000427007 DSTYKQ6XUX3 929 aa11.12□□□□□ -0.63
HDLBP-213ENST00000427007 ZNF852Q6ZMS4 543 aa11.12□□□□□ -0.63
HDLBP-213ENST00000427007 ERMP1Q7Z2K6 904 aa11.12□□□□□ -0.63
HDLBP-213ENST00000427007 HAUS6Q7Z4H7 955 aa11.12□□□□□ -0.63
HDLBP-213ENST00000427007 SUMF1Q8NBK3 374 aa11.12□□□□□ -0.63
HDLBP-213ENST00000427007 LRRC15Q8TF66 581 aa11.12□□□□□ -0.63
HDLBP-213ENST00000427007 RUBCNQ92622 972 aa11.12□□□□□ -0.63
HDLBP-213ENST00000427007 DNASE1L2Q92874 299 aa11.12□□□□□ -0.63
HDLBP-213ENST00000427007 RMDN1Q96DB5 314 aa11.12□□□□□ -0.63
HDLBP-213ENST00000427007 ASB16Q96NS5 453 aa11.12□□□□□ -0.63
HDLBP-213ENST00000427007 REEP2Q9BRK0 252 aa11.12□□□□□ -0.63
HDLBP-213ENST00000427007 TRMT61BQ9BVS5 477 aaKnown RBP11.12□□□□□ -0.63
HDLBP-213ENST00000427007 ASAH2Q9NR71 780 aa11.12□□□□□ -0.63
HDLBP-213ENST00000427007 KCND2Q9NZV8 630 aa11.12□□□□□ -0.63
HDLBP-213ENST00000427007 LARSQ9P2J5 1176 aaKnown RBP11.12□□□□□ -0.63
HDLBP-213ENST00000427007 KCNG1Q9UIX4 513 aa11.12□□□□□ -0.63
HDLBP-213ENST00000427007 FBXO4Q9UKT5 387 aa11.12□□□□□ -0.63
HDLBP-213ENST00000427007 UBQLN1Q9UMX0 589 aaKnown RBP11.12□□□□□ -0.63
HDLBP-213ENST00000427007 YIPF1Q9Y548 306 aa11.12□□□□□ -0.63
HDLBP-213ENST00000427007 NCANO14594 1321 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms