RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 ANKFY1Q9P2R3 1169 aa10.98□□□□□ -0.65
GACAT3-201ENST00000426539 TUBGCP4Q9UGJ1 667 aa10.98□□□□□ -0.65
GACAT3-201ENST00000426539 MRPS23Q9Y3D9 190 aaKnown RBP10.98□□□□□ -0.65
GACAT3-201ENST00000426539 R4GN57 208 aa10.98□□□□□ -0.65
GACAT3-201ENST00000426539 PTPRZ1P23471 2315 aaPredicted RBP10.98□□□□□ -0.65
GACAT3-201ENST00000426539 MYO15AQ9UKN7 3530 aa10.97□□□□□ -0.65
GACAT3-201ENST00000426539 KANSL1LA0AUZ9 987 aa10.97□□□□□ -0.65
GACAT3-201ENST00000426539 MOSPD3O75425 235 aa10.97□□□□□ -0.65
GACAT3-201ENST00000426539 PPP1R37O75864 691 aa10.97□□□□□ -0.65
GACAT3-201ENST00000426539 SP9P0CG40 484 aa10.97□□□□□ -0.65
GACAT3-201ENST00000426539 CXCL8P10145 99 aa10.97□□□□□ -0.65
GACAT3-201ENST00000426539 FCARP24071 287 aa10.97□□□□□ -0.65
GACAT3-201ENST00000426539 GJB2P29033 226 aa10.97□□□□□ -0.65
GACAT3-201ENST00000426539 TNFSF9P41273 254 aa10.97□□□□□ -0.65
GACAT3-201ENST00000426539 CCR2P41597 374 aa10.97□□□□□ -0.65
GACAT3-201ENST00000426539 NCKAP1LP55160 1127 aa10.97□□□□□ -0.65
GACAT3-201ENST00000426539 SPAG1Q07617 926 aa10.97□□□□□ -0.65
GACAT3-201ENST00000426539 STRN3Q13033 797 aa10.97□□□□□ -0.65
GACAT3-201ENST00000426539 NOLC1Q14978 699 aaKnown RBP eCLIP10.97□□□□□ -0.65
GACAT3-201ENST00000426539 MLF2Q15773 248 aaPredicted RBP10.97□□□□□ -0.65
GACAT3-201ENST00000426539 ZBTB6Q15916 424 aa10.97□□□□□ -0.65
GACAT3-201ENST00000426539 SLC44A4Q53GD3 710 aa10.97□□□□□ -0.65
GACAT3-201ENST00000426539 ZBTB41Q5SVQ8 909 aa10.97□□□□□ -0.65
GACAT3-201ENST00000426539 TANGO2Q6ICL3 276 aa10.97□□□□□ -0.65
GACAT3-201ENST00000426539 ZPBP2Q6X784 338 aa10.97□□□□□ -0.65
GACAT3-201ENST00000426539 C1orf210Q8IVY1 113 aa10.97□□□□□ -0.65
GACAT3-201ENST00000426539 TCEAL8Q8IYN2 117 aa10.97□□□□□ -0.65
GACAT3-201ENST00000426539 DDX12PQ92771 950 aa10.97□□□□□ -0.65
GACAT3-201ENST00000426539 KCNN1Q92952 543 aa10.97□□□□□ -0.65
GACAT3-201ENST00000426539 TCEAL4Q96EI5 215 aa10.97□□□□□ -0.65
GACAT3-201ENST00000426539 TBC1D32Q96NH3 1257 aa10.97□□□□□ -0.65
GACAT3-201ENST00000426539 CYP4F11Q9HBI6 524 aa10.97□□□□□ -0.65
GACAT3-201ENST00000426539 NUB1Q9Y5A7 615 aa10.97□□□□□ -0.65
GACAT3-201ENST00000426539 INSL5Q9Y5Q6 135 aa10.97□□□□□ -0.65
GACAT3-201ENST00000426539 TRIP11Q15643 1979 aa10.96□□□□□ -0.65
GACAT3-201ENST00000426539 TTC26A0AVF1 554 aa10.96□□□□□ -0.65
GACAT3-201ENST00000426539 H7C4K7 107 aa10.96□□□□□ -0.65
GACAT3-201ENST00000426539 PRRG1O14668 218 aa10.96□□□□□ -0.65
GACAT3-201ENST00000426539 FAM189A1O60320 539 aa10.96□□□□□ -0.65
GACAT3-201ENST00000426539 ECI2O75521 394 aa10.96□□□□□ -0.65
GACAT3-201ENST00000426539 VNN2O95498 520 aa10.96□□□□□ -0.65
GACAT3-201ENST00000426539 LRG1P02750 347 aa10.96□□□□□ -0.65
GACAT3-201ENST00000426539 PTPN2P17706 415 aa10.96□□□□□ -0.65
GACAT3-201ENST00000426539 CD72P21854 359 aa10.96□□□□□ -0.65
GACAT3-201ENST00000426539 LRPAP1P30533 357 aa10.96□□□□□ -0.65
GACAT3-201ENST00000426539 MCM4P33991 863 aa10.96□□□□□ -0.65
GACAT3-201ENST00000426539 PRKCQQ04759 706 aa10.96□□□□□ -0.65
GACAT3-201ENST00000426539 GRIN1Q05586 938 aa10.96□□□□□ -0.65
GACAT3-201ENST00000426539 CTXN3Q4LDR2 81 aa10.96□□□□□ -0.65
GACAT3-201ENST00000426539 ARL6IP4Q66PJ3 421 aaKnown RBP10.96□□□□□ -0.65
GACAT3-201ENST00000426539 KCTD17Q8N5Z5 321 aa10.96□□□□□ -0.65
GACAT3-201ENST00000426539 SHDQ96IW2 340 aa10.96□□□□□ -0.65
GACAT3-201ENST00000426539 CORO1BQ9BR76 489 aa10.96□□□□□ -0.65
GACAT3-201ENST00000426539 BLOC1S4Q9NUP1 217 aa10.96□□□□□ -0.65
GACAT3-201ENST00000426539 GDE1Q9NZC3 331 aa10.96□□□□□ -0.65
GACAT3-201ENST00000426539 KCND2Q9NZV8 630 aa10.96□□□□□ -0.65
GACAT3-201ENST00000426539 CEP72Q9P209 647 aa10.96□□□□□ -0.65
GACAT3-201ENST00000426539 CFAP54Q96N23 3096 aa10.95□□□□□ -0.66
GACAT3-201ENST00000426539 RIF1Q5UIP0 2472 aaKnown RBP10.95□□□□□ -0.66
GACAT3-201ENST00000426539 FAM186AA6NE01 2351 aa10.95□□□□□ -0.66
GACAT3-201ENST00000426539 NCANO14594 1321 aa10.95□□□□□ -0.66
GACAT3-201ENST00000426539 FAM170BA6NMN3 283 aa10.95□□□□□ -0.66
GACAT3-201ENST00000426539 M0QZQ0 153 aa10.95□□□□□ -0.66
GACAT3-201ENST00000426539 CLDN3O15551 220 aa10.95□□□□□ -0.66
GACAT3-201ENST00000426539 CLTAP09496 248 aa10.95□□□□□ -0.66
GACAT3-201ENST00000426539 ELF1P32519 619 aa10.95□□□□□ -0.66
GACAT3-201ENST00000426539 AARSP49588 968 aaKnown RBP eCLIP10.95□□□□□ -0.66
GACAT3-201ENST00000426539 GUCY2FP51841 1108 aa10.95□□□□□ -0.66
GACAT3-201ENST00000426539 SMTNP53814 917 aa10.95□□□□□ -0.66
GACAT3-201ENST00000426539 PFKPQ01813 784 aa10.95□□□□□ -0.66
GACAT3-201ENST00000426539 ADCY1Q08828 1119 aa10.95□□□□□ -0.66
GACAT3-201ENST00000426539 FZD5Q13467 585 aa10.95□□□□□ -0.66
GACAT3-201ENST00000426539 FAM78AQ5JUQ0 283 aa10.95□□□□□ -0.66
GACAT3-201ENST00000426539 TPGS2Q68CL5 300 aa10.95□□□□□ -0.66
GACAT3-201ENST00000426539 ZNF280DQ6N043 979 aa10.95□□□□□ -0.66
GACAT3-201ENST00000426539 SLC39A4Q6P5W5 647 aa10.95□□□□□ -0.66
GACAT3-201ENST00000426539 RNF19BQ6ZMZ0 732 aa10.95□□□□□ -0.66
GACAT3-201ENST00000426539 HAUS6Q7Z4H7 955 aa10.95□□□□□ -0.66
GACAT3-201ENST00000426539 BEST2Q8NFU1 509 aa10.95□□□□□ -0.66
GACAT3-201ENST00000426539 ELSPBP1Q96BH3 223 aa10.95□□□□□ -0.66
GACAT3-201ENST00000426539 ZSWIM3Q96MP5 696 aa10.95□□□□□ -0.66
GACAT3-201ENST00000426539 FIZ1Q96SL8 496 aa10.95□□□□□ -0.66
GACAT3-201ENST00000426539 REEP2Q9BRK0 252 aa10.95□□□□□ -0.66
GACAT3-201ENST00000426539 TMEM121BQ9BXQ6 578 aaPredicted RBP10.95□□□□□ -0.66
GACAT3-201ENST00000426539 CRISPLD1Q9H336 500 aa10.95□□□□□ -0.66
GACAT3-201ENST00000426539 PLEKHA5Q9HAU0 1116 aa10.95□□□□□ -0.66
GACAT3-201ENST00000426539 LTB4R2Q9NPC1 389 aa10.95□□□□□ -0.66
GACAT3-201ENST00000426539 AFF4Q9UHB7 1163 aaKnown RBP10.95□□□□□ -0.66
GACAT3-201ENST00000426539 KCNG1Q9UIX4 513 aa10.95□□□□□ -0.66
GACAT3-201ENST00000426539 KIF3AQ9Y496 699 aa10.95□□□□□ -0.66
GACAT3-201ENST00000426539 TIMM13Q9Y5L4 95 aaPredicted RBP10.95□□□□□ -0.66
GACAT3-201ENST00000426539 MYH15Q9Y2K3 1946 aa10.94□□□□□ -0.66
GACAT3-201ENST00000426539 LACTBL1A8MY62 500 aa10.94□□□□□ -0.66
GACAT3-201ENST00000426539 H3BQV1 296 aa10.94□□□□□ -0.66
GACAT3-201ENST00000426539 PPEF2O14830 753 aa10.94□□□□□ -0.66
GACAT3-201ENST00000426539 MICAL2O94851 1124 aa10.94□□□□□ -0.66
GACAT3-201ENST00000426539 OAZ2O95190 189 aa10.94□□□□□ -0.66
GACAT3-201ENST00000426539 PIGRP01833 764 aa10.94□□□□□ -0.66
GACAT3-201ENST00000426539 LMNAP02545 664 aaKnown RBP10.94□□□□□ -0.66
GACAT3-201ENST00000426539 ADRB2P07550 413 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms