RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 MED24O75448 989 aa16.08■□□□□ 0.16
PDAP1-202ENST00000426447 GJA1P17302 382 aa16.08■□□□□ 0.16
PDAP1-202ENST00000426447 DMWDQ09019 674 aa16.08■□□□□ 0.16
PDAP1-202ENST00000426447 TWF1Q12792 350 aa16.08■□□□□ 0.16
PDAP1-202ENST00000426447 SRSF5Q13243 272 aaKnown RBP16.08■□□□□ 0.16
PDAP1-202ENST00000426447 NT5DC1Q5TFE4 455 aa16.08■□□□□ 0.16
PDAP1-202ENST00000426447 FAM200AQ8TCP9 573 aa16.08■□□□□ 0.16
PDAP1-202ENST00000426447 TNFRSF25Q93038 417 aa16.08■□□□□ 0.16
PDAP1-202ENST00000426447 KIFC3Q9BVG8 833 aa16.08■□□□□ 0.16
PDAP1-202ENST00000426447 GPR88Q9GZN0 384 aa16.08■□□□□ 0.16
PDAP1-202ENST00000426447 FBXL5Q9UKA1 691 aa16.08■□□□□ 0.16
PDAP1-202ENST00000426447 TPRP12270 2363 aaKnown RBP16.08■□□□□ 0.16
PDAP1-202ENST00000426447 NOTCH4Q99466 2003 aa16.07■□□□□ 0.16
PDAP1-202ENST00000426447 HEPACAM2A8MVW5 462 aa16.07■□□□□ 0.16
PDAP1-202ENST00000426447 BTBD18B2RXH4 712 aa16.07■□□□□ 0.16
PDAP1-202ENST00000426447 SOX4Q06945 474 aaPredicted RBP16.07■□□□□ 0.16
PDAP1-202ENST00000426447 GAS6Q14393 721 aa16.07■□□□□ 0.16
PDAP1-202ENST00000426447 TEAD2Q15562 447 aa16.07■□□□□ 0.16
PDAP1-202ENST00000426447 C1orf228Q6PIY5 440 aa16.07■□□□□ 0.16
PDAP1-202ENST00000426447 LEMD2Q8NC56 503 aa16.07■□□□□ 0.16
PDAP1-202ENST00000426447 E2F7Q96AV8 911 aa16.07■□□□□ 0.16
PDAP1-202ENST00000426447 POLR3CQ9BUI4 534 aaPredicted RBP16.07■□□□□ 0.16
PDAP1-202ENST00000426447 RBM12Q9NTZ6 932 aaKnown RBP16.07■□□□□ 0.16
PDAP1-202ENST00000426447 CEP72Q9P209 647 aa16.07■□□□□ 0.16
PDAP1-202ENST00000426447 ANGPTL2Q9UKU9 493 aa16.07■□□□□ 0.16
PDAP1-202ENST00000426447 TPCN1Q9ULQ1 816 aa16.07■□□□□ 0.16
PDAP1-202ENST00000426447 TNFSF13BQ9Y275 285 aa16.07■□□□□ 0.16
PDAP1-202ENST00000426447 KMT2BQ9UMN6 2715 aaPredicted RBP16.06■□□□□ 0.16
PDAP1-202ENST00000426447 SLC38A8A6NNN8 435 aa16.06■□□□□ 0.16
PDAP1-202ENST00000426447 CTDNEP1O95476 244 aa16.06■□□□□ 0.16
PDAP1-202ENST00000426447 CPB1P15086 417 aa16.06■□□□□ 0.16
PDAP1-202ENST00000426447 MARCKSP29966 332 aaPredicted RBP16.06■□□□□ 0.16
PDAP1-202ENST00000426447 RPL9P32969 192 aaKnown RBP16.06■□□□□ 0.16
PDAP1-202ENST00000426447 MCM7P33993 719 aa16.06■□□□□ 0.16
PDAP1-202ENST00000426447 GRM5P41594 1212 aa16.06■□□□□ 0.16
PDAP1-202ENST00000426447 FOSBP53539 338 aa16.06■□□□□ 0.16
PDAP1-202ENST00000426447 MLLT6P55198 1093 aaPredicted RBP16.06■□□□□ 0.16
PDAP1-202ENST00000426447 PTGDRQ13258 359 aa16.06■□□□□ 0.16
PDAP1-202ENST00000426447 TRIM29Q14134 588 aa16.06■□□□□ 0.16
PDAP1-202ENST00000426447 MRPL58Q14197 206 aaKnown RBP16.06■□□□□ 0.16
PDAP1-202ENST00000426447 AASDHQ4L235 1098 aaPredicted RBP16.06■□□□□ 0.16
PDAP1-202ENST00000426447 ZNF280DQ6N043 979 aa16.06■□□□□ 0.16
PDAP1-202ENST00000426447 DIS3L2Q8IYB7 885 aaKnown RBP16.06■□□□□ 0.16
PDAP1-202ENST00000426447 CEP120Q8N960 986 aa16.06■□□□□ 0.16
PDAP1-202ENST00000426447 APPL2Q8NEU8 664 aa16.06■□□□□ 0.16
PDAP1-202ENST00000426447 MSANTD3Q96H12 275 aa16.06■□□□□ 0.16
PDAP1-202ENST00000426447 TCHPQ9BT92 498 aa16.06■□□□□ 0.16
PDAP1-202ENST00000426447 TMEM60Q9H2L4 133 aa16.06■□□□□ 0.16
PDAP1-202ENST00000426447 C8orf33Q9H7E9 229 aaPredicted RBP16.06■□□□□ 0.16
PDAP1-202ENST00000426447 TRPV4Q9HBA0 871 aa16.06■□□□□ 0.16
PDAP1-202ENST00000426447 AFF4Q9UHB7 1163 aaKnown RBP16.06■□□□□ 0.16
PDAP1-202ENST00000426447 MAFFQ9ULX9 164 aa16.06■□□□□ 0.16
PDAP1-202ENST00000426447 ACACBO00763 2458 aa16.06■□□□□ 0.16
PDAP1-202ENST00000426447 SPTBN2O15020 2390 aa16.06■□□□□ 0.16
PDAP1-202ENST00000426447 VWA8A3KMH1 1905 aa16.06■□□□□ 0.16
PDAP1-202ENST00000426447 CCDC169A6NNP5 214 aa16.05■□□□□ 0.16
PDAP1-202ENST00000426447 WNT7AO00755 349 aa16.05■□□□□ 0.16
PDAP1-202ENST00000426447 AXIN1O15169 862 aa16.05■□□□□ 0.16
PDAP1-202ENST00000426447 CHADO15335 359 aa16.05■□□□□ 0.16
PDAP1-202ENST00000426447 MOSPD3O75425 235 aa16.05■□□□□ 0.16
PDAP1-202ENST00000426447 FDPSP14324 419 aaKnown RBP16.05■□□□□ 0.16
PDAP1-202ENST00000426447 RPA1P27694 616 aa16.05■□□□□ 0.16
PDAP1-202ENST00000426447 MCM4P33991 863 aa16.05■□□□□ 0.16
PDAP1-202ENST00000426447 ZNF568Q3ZCX4 644 aa16.05■□□□□ 0.16
PDAP1-202ENST00000426447 DGKKQ5KSL6 1271 aa16.05■□□□□ 0.16
PDAP1-202ENST00000426447 ALKAL1Q6UXT8 129 aa16.05■□□□□ 0.16
PDAP1-202ENST00000426447 GPIHBP1Q8IV16 184 aa16.05■□□□□ 0.16
PDAP1-202ENST00000426447 FAM160A2Q8N612 972 aaPredicted RBP16.05■□□□□ 0.16
PDAP1-202ENST00000426447 C12orf50Q8NA57 414 aaPredicted RBP16.05■□□□□ 0.16
PDAP1-202ENST00000426447 TTC8Q8TAM2 541 aa16.05■□□□□ 0.16
PDAP1-202ENST00000426447 KIFAP3Q92845 792 aa16.05■□□□□ 0.16
PDAP1-202ENST00000426447 ACAP3Q96P50 834 aa16.05■□□□□ 0.16
PDAP1-202ENST00000426447 K7ESF4 209 aa16.04■□□□□ 0.16
PDAP1-202ENST00000426447 DPYSL4O14531 572 aa16.04■□□□□ 0.16
PDAP1-202ENST00000426447 SOX9P48436 509 aa16.04■□□□□ 0.16
PDAP1-202ENST00000426447 XKR4Q5GH76 650 aa16.04■□□□□ 0.16
PDAP1-202ENST00000426447 RNF19BQ6ZMZ0 732 aa16.04■□□□□ 0.16
PDAP1-202ENST00000426447 DDX12PQ92771 950 aa16.04■□□□□ 0.16
PDAP1-202ENST00000426447 ZMAT2Q96NC0 199 aaKnown RBP16.04■□□□□ 0.16
PDAP1-202ENST00000426447 ACO2Q99798 780 aaKnown RBP16.04■□□□□ 0.16
PDAP1-202ENST00000426447 CDT1Q9H211 546 aa16.04■□□□□ 0.16
PDAP1-202ENST00000426447 A0A1W2PRU2 124 aa16.03■□□□□ 0.16
PDAP1-202ENST00000426447 ARNTLO00327 626 aa16.03■□□□□ 0.16
PDAP1-202ENST00000426447 PAPSS2O95340 614 aaPredicted RBP16.03■□□□□ 0.16
PDAP1-202ENST00000426447 EPHB3P54753 998 aa16.03■□□□□ 0.16
PDAP1-202ENST00000426447 EPHA5P54756 1037 aa16.03■□□□□ 0.16
PDAP1-202ENST00000426447 ANKRD1Q15327 319 aa16.03■□□□□ 0.16
PDAP1-202ENST00000426447 N4BP2L1Q5TBK1 243 aaPredicted RBP16.03■□□□□ 0.16
PDAP1-202ENST00000426447 Q6ZS52 159 aa16.03■□□□□ 0.16
PDAP1-202ENST00000426447 HAUS6Q7Z4H7 955 aa16.03■□□□□ 0.16
PDAP1-202ENST00000426447 RALGPS2Q86X27 583 aaPredicted RBP16.03■□□□□ 0.16
PDAP1-202ENST00000426447 NECAB1Q8N987 351 aa16.03■□□□□ 0.16
PDAP1-202ENST00000426447 SHKBP1Q8TBC3 707 aa16.03■□□□□ 0.16
PDAP1-202ENST00000426447 C18orf25Q96B23 403 aaPredicted RBP16.03■□□□□ 0.16
PDAP1-202ENST00000426447 SUSD3Q96L08 255 aa16.03■□□□□ 0.16
PDAP1-202ENST00000426447 TBC1D32Q96NH3 1257 aa16.03■□□□□ 0.16
PDAP1-202ENST00000426447 MRPL4Q9BYD3 311 aaKnown RBP16.03■□□□□ 0.16
PDAP1-202ENST00000426447 ARRDC1-AS1Q9H2J1 176 aa16.03■□□□□ 0.16
PDAP1-202ENST00000426447 BHMT2Q9H2M3 363 aa16.03■□□□□ 0.16
PDAP1-202ENST00000426447 SPECC1L-ADORA2AF8WAN1 911 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms