RNA–Protein interactions for RNA: ENST00000425804.1

R3HDM1-205, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-205ENST00000425804 TOP2AP11388 1531 aaKnown RBP3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 WIZO95785 1651 aa3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 PRSS38A1L453 326 aa3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 CCDC78A2IDD5 438 aa3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 PFKMP08237 780 aa3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 POU3F2P20265 443 aaPredicted RBP3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 FGFR4P22455 802 aa3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 CD40P25942 277 aa3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 CERS1P27544 350 aa3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 ADCYAP1R1P41586 468 aa3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 MCAMP43121 646 aa3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 MMP13P45452 471 aa3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 PLCD1P51178 756 aa3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 KPNA1P52294 538 aaPredicted RBP3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 SETQ01105 290 aaPredicted RBP3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 LRRC32Q14392 662 aa3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 SLC44A4Q53GD3 710 aa3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 ATXN7L2Q5T6C5 722 aaPredicted RBP3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 SLC18B1Q6NT16 456 aa3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 JAZF1Q86VZ6 243 aa3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 KIF18BQ86Y91 864 aa3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 HOMER1Q86YM7 354 aa3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 LYSMD2Q8IV50 215 aa3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 EFHBQ8N7U6 833 aa3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 NINJ1Q92982 152 aa3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 SH2D3AQ9BRG2 576 aa3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 ANO3Q9BYT9 981 aa3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 UBA5Q9GZZ9 404 aa3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 VPS16Q9H269 839 aa3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 RNPEPQ9H4A4 650 aa3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 TXLNGQ9NUQ3 528 aa3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 PCDHB6Q9Y5E3 794 aa3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 MRPL42Q9Y6G3 142 aaKnown RBP3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 THOC2Q8NI27 1593 aaKnown RBP3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 HMGXB3Q12766 1538 aa3.24□□□□□ -1.89
R3HDM1-205ENST00000425804 BAZ1BQ9UIG0 1483 aaKnown RBP3.23□□□□□ -1.89
R3HDM1-205ENST00000425804 YY2O15391 372 aa3.23□□□□□ -1.89
R3HDM1-205ENST00000425804 SEC24DO94855 1032 aaPredicted RBP3.23□□□□□ -1.89
R3HDM1-205ENST00000425804 MAP4K4O95819 1239 aaPredicted RBP3.23□□□□□ -1.89
R3HDM1-205ENST00000425804 S100BP04271 92 aaPredicted RBP3.23□□□□□ -1.89
R3HDM1-205ENST00000425804 KRTAP10-12P60413 245 aa3.23□□□□□ -1.89
R3HDM1-205ENST00000425804 IRX6P78412 446 aaPredicted RBP3.23□□□□□ -1.89
R3HDM1-205ENST00000425804 HSD11B2P80365 405 aa3.23□□□□□ -1.89
R3HDM1-205ENST00000425804 TRIM25Q14258 630 aaKnown RBP3.23□□□□□ -1.89
R3HDM1-205ENST00000425804 RABEP1Q15276 862 aa3.23□□□□□ -1.89
R3HDM1-205ENST00000425804 RALBP1Q15311 655 aa3.23□□□□□ -1.89
R3HDM1-205ENST00000425804 TERF2Q15554 542 aa3.23□□□□□ -1.89
R3HDM1-205ENST00000425804 DALRD3Q5D0E6 543 aaKnown RBP3.23□□□□□ -1.89
R3HDM1-205ENST00000425804 DGKKQ5KSL6 1271 aa3.23□□□□□ -1.89
R3HDM1-205ENST00000425804 ESPNLQ6ZVH7 1005 aa3.23□□□□□ -1.89
R3HDM1-205ENST00000425804 C16orf86Q6ZW13 317 aa3.23□□□□□ -1.89
R3HDM1-205ENST00000425804 MED25Q71SY5 747 aa3.23□□□□□ -1.89
R3HDM1-205ENST00000425804 NIM1KQ8IY84 436 aa3.23□□□□□ -1.89
R3HDM1-205ENST00000425804 ZZZ3Q8IYH5 903 aa3.23□□□□□ -1.89
R3HDM1-205ENST00000425804 SLC35B2Q8TB61 432 aa3.23□□□□□ -1.89
R3HDM1-205ENST00000425804 MDM1Q8TC05 714 aa3.23□□□□□ -1.89
R3HDM1-205ENST00000425804 GAB3Q8WWW8 586 aa3.23□□□□□ -1.89
R3HDM1-205ENST00000425804 TFAP2BQ92481 460 aa3.23□□□□□ -1.89
R3HDM1-205ENST00000425804 APPBP2Q92624 585 aa3.23□□□□□ -1.89
R3HDM1-205ENST00000425804 FUBP3Q96I24 572 aaKnown RBP eCLIP3.23□□□□□ -1.89
R3HDM1-205ENST00000425804 PCDH12Q9NPG4 1184 aa3.23□□□□□ -1.89
R3HDM1-205ENST00000425804 EVLQ9UI08 416 aaPredicted RBP3.23□□□□□ -1.89
R3HDM1-205ENST00000425804 EDARQ9UNE0 448 aa3.23□□□□□ -1.89
R3HDM1-205ENST00000425804 PPP2R3BQ9Y5P8 575 aa3.23□□□□□ -1.89
R3HDM1-205ENST00000425804 KIF21AQ7Z4S6 1674 aa3.23□□□□□ -1.89
R3HDM1-205ENST00000425804 AATKQ6ZMQ8 1374 aa3.23□□□□□ -1.89
R3HDM1-205ENST00000425804 ATAD2BQ9ULI0 1458 aa3.22□□□□□ -1.89
R3HDM1-205ENST00000425804 A0A1W2PR48 441 aa3.22□□□□□ -1.89
R3HDM1-205ENST00000425804 PRSS44E7EML9 344 aa3.22□□□□□ -1.89
R3HDM1-205ENST00000425804 ENPP3O14638 875 aa3.22□□□□□ -1.89
R3HDM1-205ENST00000425804 MPPED1O15442 326 aa3.22□□□□□ -1.89
R3HDM1-205ENST00000425804 GPANK1O95872 356 aa3.22□□□□□ -1.89
R3HDM1-205ENST00000425804 SFPQP23246 707 aaKnown RBP eCLIP3.22□□□□□ -1.89
R3HDM1-205ENST00000425804 IL2P60568 153 aa3.22□□□□□ -1.89
R3HDM1-205ENST00000425804 MGAT5Q09328 741 aa3.22□□□□□ -1.89
R3HDM1-205ENST00000425804 UBE3CQ15386 1083 aa3.22□□□□□ -1.89
R3HDM1-205ENST00000425804 SF3B3Q15393 1217 aaKnown RBP3.22□□□□□ -1.89
R3HDM1-205ENST00000425804 PLEKHG6Q3KR16 790 aa3.22□□□□□ -1.89
R3HDM1-205ENST00000425804 MFSD14BQ5SR56 506 aa3.22□□□□□ -1.89
R3HDM1-205ENST00000425804 BROXQ5VW32 411 aa3.22□□□□□ -1.89
R3HDM1-205ENST00000425804 SUMO4Q6EEV6 95 aa3.22□□□□□ -1.89
R3HDM1-205ENST00000425804 ABHD15Q6UXT9 468 aa3.22□□□□□ -1.89
R3HDM1-205ENST00000425804 SLC41A1Q8IVJ1 513 aa3.22□□□□□ -1.89
R3HDM1-205ENST00000425804 CCDC146Q8IYE0 955 aa3.22□□□□□ -1.89
R3HDM1-205ENST00000425804 COLGALT2Q8IYK4 626 aa3.22□□□□□ -1.89
R3HDM1-205ENST00000425804 SYNPOQ8N3V7 929 aa3.22□□□□□ -1.89
R3HDM1-205ENST00000425804 CDYL2Q8N8U2 506 aa3.22□□□□□ -1.89
R3HDM1-205ENST00000425804 NSMCE1Q8WV22 266 aa3.22□□□□□ -1.89
R3HDM1-205ENST00000425804 REXO4Q9GZR2 422 aaKnown RBP3.22□□□□□ -1.89
R3HDM1-205ENST00000425804 SPC25Q9HBM1 224 aa3.22□□□□□ -1.89
R3HDM1-205ENST00000425804 TUBA8Q9NY65 449 aaPredicted RBP3.22□□□□□ -1.89
R3HDM1-205ENST00000425804 PADI4Q9UM07 663 aa3.22□□□□□ -1.89
R3HDM1-205ENST00000425804 PRKAB1Q9Y478 270 aa3.22□□□□□ -1.89
R3HDM1-205ENST00000425804 ERCC6Q03468 1493 aa3.22□□□□□ -1.89
R3HDM1-205ENST00000425804 A0A087X0B3 334 aa3.21□□□□□ -1.9
R3HDM1-205ENST00000425804 GSG1L2A8MUP6 293 aa3.21□□□□□ -1.9
R3HDM1-205ENST00000425804 PPP6CO00743 305 aa3.21□□□□□ -1.9
R3HDM1-205ENST00000425804 CREB3O43889 395 aa3.21□□□□□ -1.9
R3HDM1-205ENST00000425804 CDC45O75419 566 aa3.21□□□□□ -1.9
R3HDM1-205ENST00000425804 ITGA10O75578 1167 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms