RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 C1orf127Q8N9H9 656 aa25.98■■□□□ 1.75
APOE-202ENST00000425718 OR5B17Q8NGF7 314 aa25.98■■□□□ 1.75
APOE-202ENST00000425718 PLEKHO2Q8TD55 490 aa25.98■■□□□ 1.75
APOE-202ENST00000425718 POP1Q99575 1024 aaKnown RBP25.98■■□□□ 1.75
APOE-202ENST00000425718 CBX8Q9HC52 389 aa25.98■■□□□ 1.75
APOE-202ENST00000425718 SAMSN1Q9NSI8 373 aaKnown RBP25.98■■□□□ 1.75
APOE-202ENST00000425718 FANCLQ9NW38 375 aa25.98■■□□□ 1.75
APOE-202ENST00000425718 PRG3Q9Y2Y8 225 aaPredicted RBP25.98■■□□□ 1.75
APOE-202ENST00000425718 AFPP02771 609 aaKnown RBP25.97■■□□□ 1.75
APOE-202ENST00000425718 ITGB3P05106 788 aa25.97■■□□□ 1.75
APOE-202ENST00000425718 KRT19P08727 400 aa25.97■■□□□ 1.75
APOE-202ENST00000425718 LINC00271P0C7V0 271 aa25.97■■□□□ 1.75
APOE-202ENST00000425718 TRIM49P0CI25 452 aa25.97■■□□□ 1.75
APOE-202ENST00000425718 TRIM49CP0CI26 452 aa25.97■■□□□ 1.75
APOE-202ENST00000425718 TAF6P49848 677 aa25.97■■□□□ 1.75
APOE-202ENST00000425718 DLG4P78352 724 aa25.97■■□□□ 1.75
APOE-202ENST00000425718 NCAPHQ15003 741 aa25.97■■□□□ 1.75
APOE-202ENST00000425718 IQCB1Q15051 598 aa25.97■■□□□ 1.75
APOE-202ENST00000425718 LMBRD2Q68DH5 695 aaPredicted RBP25.97■■□□□ 1.75
APOE-202ENST00000425718 SV2AQ7L0J3 742 aa25.97■■□□□ 1.75
APOE-202ENST00000425718 IRF2BP1Q8IU81 584 aa25.97■■□□□ 1.75
APOE-202ENST00000425718 TAF4BQ92750 862 aa25.97■■□□□ 1.75
APOE-202ENST00000425718 GOLGA2P5Q9HBQ8 144 aa25.97■■□□□ 1.75
APOE-202ENST00000425718 PTPRJQ12913 1337 aa25.96■■□□□ 1.75
APOE-202ENST00000425718 STAU1O95793 577 aaKnown RBP25.96■■□□□ 1.75
APOE-202ENST00000425718 POLR2BP30876 1174 aaKnown RBP25.96■■□□□ 1.75
APOE-202ENST00000425718 TUBGCP2Q9BSJ2 902 aa25.96■■□□□ 1.75
APOE-202ENST00000425718 LMAN2LQ9H0V9 348 aa25.96■■□□□ 1.75
APOE-202ENST00000425718 HCSTQ9UBK5 93 aa25.96■■□□□ 1.75
APOE-202ENST00000425718 AGAP1Q9UPQ3 857 aa25.96■■□□□ 1.75
APOE-202ENST00000425718 SSX2IPQ9Y2D8 614 aa25.96■■□□□ 1.75
APOE-202ENST00000425718 PLXNA4Q9HCM2 1894 aa25.96■■□□□ 1.75
APOE-202ENST00000425718 FGF18O76093 207 aa25.95■■□□□ 1.74
APOE-202ENST00000425718 P4HA1P13674 534 aa25.95■■□□□ 1.74
APOE-202ENST00000425718 PIK3CAP42336 1068 aa25.95■■□□□ 1.74
APOE-202ENST00000425718 GCLMP48507 274 aa25.95■■□□□ 1.74
APOE-202ENST00000425718 KCNH2Q12809 1159 aa25.95■■□□□ 1.74
APOE-202ENST00000425718 SGSM1Q2NKQ1 1148 aa25.95■■□□□ 1.74
APOE-202ENST00000425718 C1orf220Q5T0J3 134 aa25.95■■□□□ 1.74
APOE-202ENST00000425718 ZNF697Q5TEC3 545 aa25.95■■□□□ 1.74
APOE-202ENST00000425718 TDRD10Q5VZ19 366 aaKnown RBP25.95■■□□□ 1.74
APOE-202ENST00000425718 C15orf39Q6ZRI6 1047 aa25.95■■□□□ 1.74
APOE-202ENST00000425718 DDX53Q86TM3 631 aaKnown RBP25.95■■□□□ 1.74
APOE-202ENST00000425718 FBXL13Q8NEE6 735 aa25.95■■□□□ 1.74
APOE-202ENST00000425718 ZNF516Q92618 1163 aa25.95■■□□□ 1.74
APOE-202ENST00000425718 C17orf80Q9BSJ5 609 aa25.95■■□□□ 1.74
APOE-202ENST00000425718 ZNF576Q9H609 170 aa25.95■■□□□ 1.74
APOE-202ENST00000425718 LAMA2P24043 3122 aaKnown RBP25.95■■□□□ 1.74
APOE-202ENST00000425718 H3BNC9 293 aa25.94■■□□□ 1.74
APOE-202ENST00000425718 B4GALT3O60512 393 aa25.94■■□□□ 1.74
APOE-202ENST00000425718 KIF4AO95239 1232 aa25.94■■□□□ 1.74
APOE-202ENST00000425718 ZNF18P17022 549 aa25.94■■□□□ 1.74
APOE-202ENST00000425718 FMO5P49326 533 aa25.94■■□□□ 1.74
APOE-202ENST00000425718 MYL7Q01449 175 aa25.94■■□□□ 1.74
APOE-202ENST00000425718 PPP3CAQ08209 521 aa25.94■■□□□ 1.74
APOE-202ENST00000425718 NCOA4Q13772 614 aa25.94■■□□□ 1.74
APOE-202ENST00000425718 PDE12Q6L8Q7 609 aaKnown RBP25.94■■□□□ 1.74
APOE-202ENST00000425718 FUT10Q6P4F1 479 aa25.94■■□□□ 1.74
APOE-202ENST00000425718 PDXDC1Q6P996 788 aa25.94■■□□□ 1.74
APOE-202ENST00000425718 GPR65Q8IYL9 337 aa25.94■■□□□ 1.74
APOE-202ENST00000425718 KLHL23Q8NBE8 558 aa25.94■■□□□ 1.74
APOE-202ENST00000425718 FAXDC2Q96IV6 333 aa25.94■■□□□ 1.74
APOE-202ENST00000425718 MMRN2Q9H8L6 949 aa25.94■■□□□ 1.74
APOE-202ENST00000425718 VRTNQ9H8Y1 702 aa25.94■■□□□ 1.74
APOE-202ENST00000425718 MARCH5Q9NX47 278 aa25.94■■□□□ 1.74
APOE-202ENST00000425718 GTPBP10A4D1E9 387 aaKnown RBP25.93■■□□□ 1.74
APOE-202ENST00000425718 NT5C1B-RDH14C9J2C7 533 aa25.93■■□□□ 1.74
APOE-202ENST00000425718 GUCY2FP51841 1108 aa25.93■■□□□ 1.74
APOE-202ENST00000425718 LILRA4P59901 499 aa25.93■■□□□ 1.74
APOE-202ENST00000425718 HABP4Q5JVS0 413 aaKnown RBP25.93■■□□□ 1.74
APOE-202ENST00000425718 PAAF1Q9BRP4 392 aa25.93■■□□□ 1.74
APOE-202ENST00000425718 LIMA1Q9UHB6 759 aaKnown RBP25.93■■□□□ 1.74
APOE-202ENST00000425718 SIX4Q9UIU6 781 aa25.93■■□□□ 1.74
APOE-202ENST00000425718 DSEQ9UL01 958 aa25.93■■□□□ 1.74
APOE-202ENST00000425718 COQ4Q9Y3A0 265 aa25.93■■□□□ 1.74
APOE-202ENST00000425718 SYN3O14994 580 aa25.92■■□□□ 1.74
APOE-202ENST00000425718 AARSP49588 968 aaKnown RBP eCLIP25.92■■□□□ 1.74
APOE-202ENST00000425718 GPM6BQ13491 265 aa25.92■■□□□ 1.74
APOE-202ENST00000425718 PTPROQ16827 1216 aa25.92■■□□□ 1.74
APOE-202ENST00000425718 USP41Q3LFD5 358 aa25.92■■□□□ 1.74
APOE-202ENST00000425718 FILIP1LQ4L180 1135 aa25.92■■□□□ 1.74
APOE-202ENST00000425718 VWA3BQ502W6 1294 aa25.92■■□□□ 1.74
APOE-202ENST00000425718 WDR44Q5JSH3 913 aa25.92■■□□□ 1.74
APOE-202ENST00000425718 DSTYKQ6XUX3 929 aa25.92■■□□□ 1.74
APOE-202ENST00000425718 APPL2Q8NEU8 664 aa25.92■■□□□ 1.74
APOE-202ENST00000425718 SPATA18Q8TC71 538 aa25.92■■□□□ 1.74
APOE-202ENST00000425718 ARNTL2Q8WYA1 636 aa25.92■■□□□ 1.74
APOE-202ENST00000425718 HPDLQ96IR7 371 aa25.92■■□□□ 1.74
APOE-202ENST00000425718 SUSD3Q96L08 255 aa25.92■■□□□ 1.74
APOE-202ENST00000425718 LRRC10BA6NIK2 292 aa25.91■■□□□ 1.74
APOE-202ENST00000425718 KPNA7A9QM74 516 aa25.91■■□□□ 1.74
APOE-202ENST00000425718 CLSTN1O94985 981 aa25.91■■□□□ 1.74
APOE-202ENST00000425718 HLA-DRAP01903 254 aa25.91■■□□□ 1.74
APOE-202ENST00000425718 SOD2P04179 222 aa25.91■■□□□ 1.74
APOE-202ENST00000425718 ODC1P11926 461 aa25.91■■□□□ 1.74
APOE-202ENST00000425718 PBX3P40426 434 aa25.91■■□□□ 1.74
APOE-202ENST00000425718 CREMQ03060 361 aa25.91■■□□□ 1.74
APOE-202ENST00000425718 KRT31Q15323 416 aa25.91■■□□□ 1.74
APOE-202ENST00000425718 ZNF699Q32M78 642 aa25.91■■□□□ 1.74
APOE-202ENST00000425718 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms