RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 AKAP13Q12802 2813 aa13.9□□□□□ -0.18
SGCE-203ENST00000425444 K7ENM7 598 aa13.9□□□□□ -0.18
SGCE-203ENST00000425444 KIF4AO95239 1232 aa13.9□□□□□ -0.18
SGCE-203ENST00000425444 ADH1AP07327 375 aa13.9□□□□□ -0.18
SGCE-203ENST00000425444 MCF2P10911 925 aa13.9□□□□□ -0.18
SGCE-203ENST00000425444 GRM5P41594 1212 aa13.9□□□□□ -0.18
SGCE-203ENST00000425444 MLF2Q15773 248 aaPredicted RBP13.9□□□□□ -0.18
SGCE-203ENST00000425444 USP41Q3LFD5 358 aa13.9□□□□□ -0.18
SGCE-203ENST00000425444 ARSHQ5FYA8 562 aa13.9□□□□□ -0.18
SGCE-203ENST00000425444 TAS1R1Q7RTX1 841 aa13.9□□□□□ -0.18
SGCE-203ENST00000425444 MYCT1Q8N699 235 aa13.9□□□□□ -0.18
SGCE-203ENST00000425444 TMEM161BQ8NDZ6 487 aa13.9□□□□□ -0.18
SGCE-203ENST00000425444 LRRC15Q8TF66 581 aa13.9□□□□□ -0.18
SGCE-203ENST00000425444 NELL1Q92832 810 aa13.9□□□□□ -0.18
SGCE-203ENST00000425444 EPSTI1Q96J88 318 aa13.9□□□□□ -0.18
SGCE-203ENST00000425444 B3GALT6Q96L58 329 aa13.9□□□□□ -0.18
SGCE-203ENST00000425444 CLIC6Q96NY7 704 aa13.9□□□□□ -0.18
SGCE-203ENST00000425444 NTPCRQ9BSD7 190 aaKnown RBP13.9□□□□□ -0.18
SGCE-203ENST00000425444 RHOBTB2Q9BYZ6 727 aa13.9□□□□□ -0.18
SGCE-203ENST00000425444 CCSER1Q9C0I3 900 aa13.9□□□□□ -0.18
SGCE-203ENST00000425444 PIDD1Q9HB75 910 aa13.9□□□□□ -0.18
SGCE-203ENST00000425444 PARVGQ9HBI0 331 aa13.9□□□□□ -0.18
SGCE-203ENST00000425444 BLOC1S4Q9NUP1 217 aa13.9□□□□□ -0.18
SGCE-203ENST00000425444 DPP7Q9UHL4 492 aa13.9□□□□□ -0.18
SGCE-203ENST00000425444 FBXO2Q9UK22 296 aaPredicted RBP13.9□□□□□ -0.18
SGCE-203ENST00000425444 HELZ2Q9BYK8 2649 aaKnown RBP13.89□□□□□ -0.19
SGCE-203ENST00000425444 TEX28O15482 410 aa13.89□□□□□ -0.19
SGCE-203ENST00000425444 LILRB3O75022 631 aa13.89□□□□□ -0.19
SGCE-203ENST00000425444 GLUD1P00367 558 aa13.89□□□□□ -0.19
SGCE-203ENST00000425444 MAPTP10636 758 aaKnown RBP13.89□□□□□ -0.19
SGCE-203ENST00000425444 CD72P21854 359 aa13.89□□□□□ -0.19
SGCE-203ENST00000425444 PMLP29590 882 aa13.89□□□□□ -0.19
SGCE-203ENST00000425444 MAGEA9P43362 315 aa13.89□□□□□ -0.19
SGCE-203ENST00000425444 NCKAP1LP55160 1127 aa13.89□□□□□ -0.19
SGCE-203ENST00000425444 DSG1Q02413 1049 aa13.89□□□□□ -0.19
SGCE-203ENST00000425444 CREMQ03060 361 aa13.89□□□□□ -0.19
SGCE-203ENST00000425444 NOLC1Q14978 699 aaKnown RBP eCLIP13.89□□□□□ -0.19
SGCE-203ENST00000425444 STK38Q15208 465 aa13.89□□□□□ -0.19
SGCE-203ENST00000425444 SLC44A4Q53GD3 710 aa13.89□□□□□ -0.19
SGCE-203ENST00000425444 FOXD4L5Q5VV16 416 aaPredicted RBP13.89□□□□□ -0.19
SGCE-203ENST00000425444 RNF168Q8IYW5 571 aaPredicted RBP13.89□□□□□ -0.19
SGCE-203ENST00000425444 FOXD4L4Q8WXT5 416 aaPredicted RBP13.89□□□□□ -0.19
SGCE-203ENST00000425444 DDX1Q92499 740 aaKnown RBP13.89□□□□□ -0.19
SGCE-203ENST00000425444 ACAP3Q96P50 834 aa13.89□□□□□ -0.19
SGCE-203ENST00000425444 USP28Q96RU2 1077 aa13.89□□□□□ -0.19
SGCE-203ENST00000425444 RPP25Q9BUL9 199 aaKnown RBP13.89□□□□□ -0.19
SGCE-203ENST00000425444 DDX23Q9BUQ8 820 aaKnown RBP13.89□□□□□ -0.19
SGCE-203ENST00000425444 OSBPL6Q9BZF3 934 aa13.89□□□□□ -0.19
SGCE-203ENST00000425444 GPR62Q9BZJ7 368 aa13.89□□□□□ -0.19
SGCE-203ENST00000425444 CXCL16Q9H2A7 254 aa13.89□□□□□ -0.19
SGCE-203ENST00000425444 PTPRHQ9HD43 1115 aa13.89□□□□□ -0.19
SGCE-203ENST00000425444 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.89□□□□□ -0.19
SGCE-203ENST00000425444 DOCK6Q96HP0 2047 aa13.89□□□□□ -0.19
SGCE-203ENST00000425444 LAMA5O15230 3695 aa13.89□□□□□ -0.19
SGCE-203ENST00000425444 ASH1LQ9NR48 2969 aaKnown RBP13.89□□□□□ -0.19
SGCE-203ENST00000425444 COL4A3Q01955 1670 aa13.88□□□□□ -0.19
SGCE-203ENST00000425444 MYH15Q9Y2K3 1946 aa13.88□□□□□ -0.19
SGCE-203ENST00000425444 CLDN3O15551 220 aa13.88□□□□□ -0.19
SGCE-203ENST00000425444 TOM1L1O75674 476 aa13.88□□□□□ -0.19
SGCE-203ENST00000425444 PROS1P07225 676 aa13.88□□□□□ -0.19
SGCE-203ENST00000425444 PROZP22891 400 aa13.88□□□□□ -0.19
SGCE-203ENST00000425444 PRKCQQ04759 706 aa13.88□□□□□ -0.19
SGCE-203ENST00000425444 ZBTB41Q5SVQ8 909 aa13.88□□□□□ -0.19
SGCE-203ENST00000425444 N4BP2L1Q5TBK1 243 aaPredicted RBP13.88□□□□□ -0.19
SGCE-203ENST00000425444 RRAGBQ5VZM2 374 aa13.88□□□□□ -0.19
SGCE-203ENST00000425444 LAIR1Q6GTX8 287 aa13.88□□□□□ -0.19
SGCE-203ENST00000425444 ZPBP2Q6X784 338 aa13.88□□□□□ -0.19
SGCE-203ENST00000425444 USP49Q70CQ1 688 aa13.88□□□□□ -0.19
SGCE-203ENST00000425444 HAUS6Q7Z4H7 955 aa13.88□□□□□ -0.19
SGCE-203ENST00000425444 CEP57Q86XR8 500 aa13.88□□□□□ -0.19
SGCE-203ENST00000425444 GLYCTKQ8IVS8 523 aa13.88□□□□□ -0.19
SGCE-203ENST00000425444 KRI1Q8N9T8 703 aaKnown RBP13.88□□□□□ -0.19
SGCE-203ENST00000425444 ZNF707Q96C28 371 aaPredicted RBP13.88□□□□□ -0.19
SGCE-203ENST00000425444 ZBTB45Q96K62 511 aaPredicted RBP13.88□□□□□ -0.19
SGCE-203ENST00000425444 UROC1Q96N76 676 aa13.88□□□□□ -0.19
SGCE-203ENST00000425444 ZNF396Q96N95 335 aaPredicted RBP13.88□□□□□ -0.19
SGCE-203ENST00000425444 PPP1R10Q96QC0 940 aaKnown RBP13.88□□□□□ -0.19
SGCE-203ENST00000425444 FAM126AQ9BYI3 521 aaPredicted RBP13.88□□□□□ -0.19
SGCE-203ENST00000425444 LTB4R2Q9NPC1 389 aa13.88□□□□□ -0.19
SGCE-203ENST00000425444 CHST7Q9NS84 486 aa13.88□□□□□ -0.19
SGCE-203ENST00000425444 STK17AQ9UEE5 414 aa13.88□□□□□ -0.19
SGCE-203ENST00000425444 MYH11P35749 1972 aa13.87□□□□□ -0.19
SGCE-203ENST00000425444 HNRNPDLO14979 420 aaKnown RBP13.87□□□□□ -0.19
SGCE-203ENST00000425444 TRAK2O60296 914 aa13.87□□□□□ -0.19
SGCE-203ENST00000425444 GDF9O60383 454 aa13.87□□□□□ -0.19
SGCE-203ENST00000425444 LRP3O75074 770 aa13.87□□□□□ -0.19
SGCE-203ENST00000425444 B3GAT3O94766 335 aa13.87□□□□□ -0.19
SGCE-203ENST00000425444 EFEMP2O95967 443 aa13.87□□□□□ -0.19
SGCE-203ENST00000425444 RETP07949 1114 aa13.87□□□□□ -0.19
SGCE-203ENST00000425444 SPATA31D3P0C874 917 aa13.87□□□□□ -0.19
SGCE-203ENST00000425444 SCP2P22307 547 aa13.87□□□□□ -0.19
SGCE-203ENST00000425444 DDIT3P35638 169 aa13.87□□□□□ -0.19
SGCE-203ENST00000425444 LIG4P49917 911 aa13.87□□□□□ -0.19
SGCE-203ENST00000425444 SHC2P98077 582 aa13.87□□□□□ -0.19
SGCE-203ENST00000425444 ELAVL2Q12926 359 aaKnown RBP13.87□□□□□ -0.19
SGCE-203ENST00000425444 SLC39A14Q15043 492 aa13.87□□□□□ -0.19
SGCE-203ENST00000425444 NAB2Q15742 525 aa13.87□□□□□ -0.19
SGCE-203ENST00000425444 FAM171A1Q5VUB5 890 aa13.87□□□□□ -0.19
SGCE-203ENST00000425444 IL31Q6EBC2 164 aa13.87□□□□□ -0.19
SGCE-203ENST00000425444 PARM1Q6UWI2 310 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms