RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 INSL5Q9Y5Q6 135 aa19.34■□□□□ 0.69
GPC1-203ENST00000425056 PTPRZ1P23471 2315 aaPredicted RBP19.34■□□□□ 0.69
GPC1-203ENST00000425056 COL4A3Q01955 1670 aa19.33■□□□□ 0.69
GPC1-203ENST00000425056 HNRNPDLO14979 420 aaKnown RBP19.33■□□□□ 0.68
GPC1-203ENST00000425056 FAM189A1O60320 539 aa19.33■□□□□ 0.68
GPC1-203ENST00000425056 DCNP07585 359 aaKnown RBP19.33■□□□□ 0.68
GPC1-203ENST00000425056 LRPAP1P30533 357 aa19.33■□□□□ 0.68
GPC1-203ENST00000425056 UBA7P41226 1012 aa19.33■□□□□ 0.68
GPC1-203ENST00000425056 MATR3P43243 847 aaKnown RBP eCLIP19.33■□□□□ 0.68
GPC1-203ENST00000425056 ARPP19P56211 112 aa19.33■□□□□ 0.68
GPC1-203ENST00000425056 KYAT1Q16773 422 aa19.33■□□□□ 0.68
GPC1-203ENST00000425056 DDX12PQ92771 950 aa19.33■□□□□ 0.68
GPC1-203ENST00000425056 DDX23Q9BUQ8 820 aaKnown RBP19.33■□□□□ 0.68
GPC1-203ENST00000425056 CYP4F11Q9HBI6 524 aa19.33■□□□□ 0.68
GPC1-203ENST00000425056 PCDHB8Q9UN66 801 aa19.33■□□□□ 0.68
GPC1-203ENST00000425056 FANCMQ8IYD8 2048 aa19.32■□□□□ 0.68
GPC1-203ENST00000425056 K7ENM7 598 aa19.32■□□□□ 0.68
GPC1-203ENST00000425056 M0QZQ0 153 aa19.32■□□□□ 0.68
GPC1-203ENST00000425056 ECI2O75521 394 aa19.32■□□□□ 0.68
GPC1-203ENST00000425056 SEC24AO95486 1093 aa19.32■□□□□ 0.68
GPC1-203ENST00000425056 CEBPBP17676 345 aa19.32■□□□□ 0.68
GPC1-203ENST00000425056 PTPN2P17706 415 aa19.32■□□□□ 0.68
GPC1-203ENST00000425056 PLCG1P19174 1290 aa19.32■□□□□ 0.68
GPC1-203ENST00000425056 CYP3A5P20815 502 aa19.32■□□□□ 0.68
GPC1-203ENST00000425056 LONP1P36776 959 aaKnown RBP19.32■□□□□ 0.68
GPC1-203ENST00000425056 TNFSF9P41273 254 aa19.32■□□□□ 0.68
GPC1-203ENST00000425056 AARSP49588 968 aaKnown RBP eCLIP19.32■□□□□ 0.68
GPC1-203ENST00000425056 LIG4P49917 911 aa19.32■□□□□ 0.68
GPC1-203ENST00000425056 PFKPQ01813 784 aa19.32■□□□□ 0.68
GPC1-203ENST00000425056 PPP2R3AQ06190 1150 aa19.32■□□□□ 0.68
GPC1-203ENST00000425056 MLF2Q15773 248 aaPredicted RBP19.32■□□□□ 0.68
GPC1-203ENST00000425056 ZBTB6Q15916 424 aa19.32■□□□□ 0.68
GPC1-203ENST00000425056 PRSS36Q5K4E3 855 aa19.32■□□□□ 0.68
GPC1-203ENST00000425056 KIF12Q96FN5 646 aa19.32■□□□□ 0.68
GPC1-203ENST00000425056 FOXQ1Q9C009 403 aa19.32■□□□□ 0.68
GPC1-203ENST00000425056 PARVGQ9HBI0 331 aa19.32■□□□□ 0.68
GPC1-203ENST00000425056 AFF4Q9UHB7 1163 aaKnown RBP19.32■□□□□ 0.68
GPC1-203ENST00000425056 MAFFQ9ULX9 164 aa19.32■□□□□ 0.68
GPC1-203ENST00000425056 TBX20Q9UMR3 447 aa19.32■□□□□ 0.68
GPC1-203ENST00000425056 UBQLN1Q9UMX0 589 aaKnown RBP19.32■□□□□ 0.68
GPC1-203ENST00000425056 PATJQ8NI35 1801 aa19.32■□□□□ 0.68
GPC1-203ENST00000425056 TSC2P49815 1807 aa19.31■□□□□ 0.68
GPC1-203ENST00000425056 FAM13AO94988 1023 aa19.31■□□□□ 0.68
GPC1-203ENST00000425056 PRKCQQ04759 706 aa19.31■□□□□ 0.68
GPC1-203ENST00000425056 GRIN1Q05586 938 aa19.31■□□□□ 0.68
GPC1-203ENST00000425056 SPAG1Q07617 926 aa19.31■□□□□ 0.68
GPC1-203ENST00000425056 KARSQ15046 597 aaKnown RBP19.31■□□□□ 0.68
GPC1-203ENST00000425056 SPECC1Q5M775 1068 aa19.31■□□□□ 0.68
GPC1-203ENST00000425056 POTEHQ6S545 545 aa19.31■□□□□ 0.68
GPC1-203ENST00000425056 TMEM130Q8N3G9 435 aa19.31■□□□□ 0.68
GPC1-203ENST00000425056 BEST2Q8NFU1 509 aa19.31■□□□□ 0.68
GPC1-203ENST00000425056 RAD54LQ92698 747 aa19.31■□□□□ 0.68
GPC1-203ENST00000425056 FIZ1Q96SL8 496 aa19.31■□□□□ 0.68
GPC1-203ENST00000425056 ANK1P16157 1881 aa19.31■□□□□ 0.68
GPC1-203ENST00000425056 KANSL1LA0AUZ9 987 aa19.3■□□□□ 0.68
GPC1-203ENST00000425056 OGTO15294 1046 aa19.3■□□□□ 0.68
GPC1-203ENST00000425056 MICAL2O94851 1124 aa19.3■□□□□ 0.68
GPC1-203ENST00000425056 ADRB2P07550 413 aa19.3■□□□□ 0.68
GPC1-203ENST00000425056 GLULP15104 373 aa19.3■□□□□ 0.68
GPC1-203ENST00000425056 YWHAHQ04917 246 aaPredicted RBP19.3■□□□□ 0.68
GPC1-203ENST00000425056 ADCY1Q08828 1119 aa19.3■□□□□ 0.68
GPC1-203ENST00000425056 SNW1Q13573 536 aaKnown RBP19.3■□□□□ 0.68
GPC1-203ENST00000425056 DHX8Q14562 1220 aaKnown RBP19.3■□□□□ 0.68
GPC1-203ENST00000425056 MCM6Q14566 821 aa19.3■□□□□ 0.68
GPC1-203ENST00000425056 SF3A1Q15459 793 aaKnown RBP19.3■□□□□ 0.68
GPC1-203ENST00000425056 ENOX2Q16206 610 aaKnown RBP19.3■□□□□ 0.68
GPC1-203ENST00000425056 ZBTB41Q5SVQ8 909 aa19.3■□□□□ 0.68
GPC1-203ENST00000425056 MYCT1Q8N699 235 aa19.3■□□□□ 0.68
GPC1-203ENST00000425056 MCRS1Q96EZ8 462 aa19.3■□□□□ 0.68
GPC1-203ENST00000425056 TSPAN18Q96SJ8 248 aa19.3■□□□□ 0.68
GPC1-203ENST00000425056 CORO1BQ9BR76 489 aa19.3■□□□□ 0.68
GPC1-203ENST00000425056 GVINP1Q7Z2Y8 2422 aa19.3■□□□□ 0.68
GPC1-203ENST00000425056 CACNA1IQ9P0X4 2223 aa19.29■□□□□ 0.68
GPC1-203ENST00000425056 COL4A2P08572 1712 aa19.29■□□□□ 0.68
GPC1-203ENST00000425056 A0A0B4J269 797 aa19.29■□□□□ 0.68
GPC1-203ENST00000425056 LACTBL1A8MY62 500 aa19.29■□□□□ 0.68
GPC1-203ENST00000425056 ZNF197O14709 1029 aa19.29■□□□□ 0.68
GPC1-203ENST00000425056 XPOTO43592 962 aaKnown RBP19.29■□□□□ 0.68
GPC1-203ENST00000425056 TRAK2O60296 914 aa19.29■□□□□ 0.68
GPC1-203ENST00000425056 OAZ2O95190 189 aa19.29■□□□□ 0.68
GPC1-203ENST00000425056 CPB1P15086 417 aa19.29■□□□□ 0.68
GPC1-203ENST00000425056 FCARP24071 287 aa19.29■□□□□ 0.68
GPC1-203ENST00000425056 ABCD1P33897 745 aa19.29■□□□□ 0.68
GPC1-203ENST00000425056 SLC44A4Q53GD3 710 aa19.29■□□□□ 0.68
GPC1-203ENST00000425056 SLC39A4Q6P5W5 647 aa19.29■□□□□ 0.68
GPC1-203ENST00000425056 MAP4K3Q8IVH8 894 aa19.29■□□□□ 0.68
GPC1-203ENST00000425056 C1orf210Q8IVY1 113 aa19.29■□□□□ 0.68
GPC1-203ENST00000425056 RASSF8Q8NHQ8 419 aa19.29■□□□□ 0.68
GPC1-203ENST00000425056 LARP4BQ92615 738 aaKnown RBP19.29■□□□□ 0.68
GPC1-203ENST00000425056 ELSPBP1Q96BH3 223 aa19.29■□□□□ 0.68
GPC1-203ENST00000425056 TCEAL4Q96EI5 215 aa19.29■□□□□ 0.68
GPC1-203ENST00000425056 OXCT2Q9BYC2 517 aaPredicted RBP19.29■□□□□ 0.68
GPC1-203ENST00000425056 OSBPL6Q9BZF3 934 aa19.29■□□□□ 0.68
GPC1-203ENST00000425056 CCSER1Q9C0I3 900 aa19.29■□□□□ 0.68
GPC1-203ENST00000425056 RPF1Q9H9Y2 349 aaKnown RBP19.29■□□□□ 0.68
GPC1-203ENST00000425056 LRRN2O75325 713 aa19.28■□□□□ 0.68
GPC1-203ENST00000425056 TBCAO75347 108 aaKnown RBP19.28■□□□□ 0.68
GPC1-203ENST00000425056 MARCKSP29966 332 aaPredicted RBP19.28■□□□□ 0.68
GPC1-203ENST00000425056 CCR2P41597 374 aa19.28■□□□□ 0.68
GPC1-203ENST00000425056 EPHA5P54756 1037 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms