RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 XKR4Q5GH76 650 aa17.68■□□□□ 0.42
PUDP-203ENST00000424830 ZNF280DQ6N043 979 aa17.68■□□□□ 0.42
PUDP-203ENST00000424830 VITQ6UXI7 678 aa17.68■□□□□ 0.42
PUDP-203ENST00000424830 MAP4K3Q8IVH8 894 aa17.68■□□□□ 0.42
PUDP-203ENST00000424830 CEP120Q8N960 986 aa17.68■□□□□ 0.42
PUDP-203ENST00000424830 NSUN7Q8NE18 718 aaKnown RBP17.68■□□□□ 0.42
PUDP-203ENST00000424830 NETO1Q8TDF5 533 aa17.68■□□□□ 0.42
PUDP-203ENST00000424830 ASAH2Q9NR71 780 aa17.68■□□□□ 0.42
PUDP-203ENST00000424830 FBXL5Q9UKA1 691 aa17.68■□□□□ 0.42
PUDP-203ENST00000424830 MAFFQ9ULX9 164 aa17.68■□□□□ 0.42
PUDP-203ENST00000424830 PHLPP2Q6ZVD8 1323 aa17.68■□□□□ 0.42
PUDP-203ENST00000424830 ZNF263O14978 683 aa17.67■□□□□ 0.42
PUDP-203ENST00000424830 SEC24AO95486 1093 aa17.67■□□□□ 0.42
PUDP-203ENST00000424830 RETP07949 1114 aa17.67■□□□□ 0.42
PUDP-203ENST00000424830 ADRB1P08588 477 aa17.67■□□□□ 0.42
PUDP-203ENST00000424830 RPL9P32969 192 aaKnown RBP17.67■□□□□ 0.42
PUDP-203ENST00000424830 CCR2P41597 374 aa17.67■□□□□ 0.42
PUDP-203ENST00000424830 CXCL12P48061 93 aa17.67■□□□□ 0.42
PUDP-203ENST00000424830 ANAPC15P60006 121 aa17.67■□□□□ 0.42
PUDP-203ENST00000424830 ORC2Q13416 577 aaPredicted RBP17.67■□□□□ 0.42
PUDP-203ENST00000424830 ME3Q16798 604 aa17.67■□□□□ 0.42
PUDP-203ENST00000424830 C1orf228Q6PIY5 440 aa17.67■□□□□ 0.42
PUDP-203ENST00000424830 ALKAL1Q6UXT8 129 aa17.67■□□□□ 0.42
PUDP-203ENST00000424830 APPL2Q8NEU8 664 aa17.67■□□□□ 0.42
PUDP-203ENST00000424830 ZSCAN18Q8TBC5 510 aaPredicted RBP17.67■□□□□ 0.42
PUDP-203ENST00000424830 MRPL4Q9BYD3 311 aaKnown RBP17.67■□□□□ 0.42
PUDP-203ENST00000424830 CDT1Q9H211 546 aa17.67■□□□□ 0.42
PUDP-203ENST00000424830 BHMT2Q9H2M3 363 aa17.67■□□□□ 0.42
PUDP-203ENST00000424830 SLITRK6Q9H5Y7 841 aa17.67■□□□□ 0.42
PUDP-203ENST00000424830 AFF4Q9UHB7 1163 aaKnown RBP17.67■□□□□ 0.42
PUDP-203ENST00000424830 CCDC169A6NNP5 214 aa17.66■□□□□ 0.42
PUDP-203ENST00000424830 JAK2O60674 1132 aa17.66■□□□□ 0.42
PUDP-203ENST00000424830 MYL4P12829 197 aa17.66■□□□□ 0.42
PUDP-203ENST00000424830 KCNE1P15382 129 aa17.66■□□□□ 0.42
PUDP-203ENST00000424830 MCM4P33991 863 aa17.66■□□□□ 0.42
PUDP-203ENST00000424830 CCT6AP40227 531 aaKnown RBP17.66■□□□□ 0.42
PUDP-203ENST00000424830 TWF1Q12792 350 aa17.66■□□□□ 0.42
PUDP-203ENST00000424830 DMP1Q13316 513 aaPredicted RBP17.66■□□□□ 0.42
PUDP-203ENST00000424830 SIM2Q14190 667 aaPredicted RBP17.66■□□□□ 0.42
PUDP-203ENST00000424830 MRPL58Q14197 206 aaKnown RBP17.66■□□□□ 0.42
PUDP-203ENST00000424830 LRRC32Q14392 662 aa17.66■□□□□ 0.42
PUDP-203ENST00000424830 CSGALNACT1Q8TDX6 532 aa17.66■□□□□ 0.42
PUDP-203ENST00000424830 E2F7Q96AV8 911 aa17.66■□□□□ 0.42
PUDP-203ENST00000424830 MSANTD3Q96H12 275 aa17.66■□□□□ 0.42
PUDP-203ENST00000424830 ZSWIM3Q96MP5 696 aa17.66■□□□□ 0.42
PUDP-203ENST00000424830 ZMAT2Q96NC0 199 aaKnown RBP17.66■□□□□ 0.42
PUDP-203ENST00000424830 ACAP3Q96P50 834 aa17.66■□□□□ 0.42
PUDP-203ENST00000424830 ACO2Q99798 780 aaKnown RBP17.66■□□□□ 0.42
PUDP-203ENST00000424830 TCHPQ9BT92 498 aa17.66■□□□□ 0.42
PUDP-203ENST00000424830 TRPV4Q9HBA0 871 aa17.66■□□□□ 0.42
PUDP-203ENST00000424830 POLD4Q9HCU8 107 aa17.66■□□□□ 0.42
PUDP-203ENST00000424830 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.66■□□□□ 0.42
PUDP-203ENST00000424830 RALGAPA1Q6GYQ0 2036 aa17.65■□□□□ 0.42
PUDP-203ENST00000424830 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.65■□□□□ 0.42
PUDP-203ENST00000424830 SLC30A4O14863 429 aa17.65■□□□□ 0.42
PUDP-203ENST00000424830 LARGE1O95461 756 aa17.65■□□□□ 0.42
PUDP-203ENST00000424830 MCF2P10911 925 aa17.65■□□□□ 0.42
PUDP-203ENST00000424830 CPB1P15086 417 aa17.65■□□□□ 0.42
PUDP-203ENST00000424830 CCNE1P24864 410 aa17.65■□□□□ 0.42
PUDP-203ENST00000424830 ANP32AP39687 249 aaKnown RBP17.65■□□□□ 0.42
PUDP-203ENST00000424830 VIPR2P41587 438 aa17.65■□□□□ 0.42
PUDP-203ENST00000424830 C8orf34Q49A92 452 aa17.65■□□□□ 0.42
PUDP-203ENST00000424830 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.65■□□□□ 0.42
PUDP-203ENST00000424830 MFSD6LQ8IWD5 586 aa17.65■□□□□ 0.42
PUDP-203ENST00000424830 YAF2Q8IY57 180 aa17.65■□□□□ 0.42
PUDP-203ENST00000424830 HS6ST3Q8IZP7 471 aa17.65■□□□□ 0.42
PUDP-203ENST00000424830 SUSD3Q96L08 255 aa17.65■□□□□ 0.42
PUDP-203ENST00000424830 GPR88Q9GZN0 384 aa17.65■□□□□ 0.42
PUDP-203ENST00000424830 CNTN3Q9P232 1028 aa17.65■□□□□ 0.42
PUDP-203ENST00000424830 PDCD11Q14690 1871 aaKnown RBP17.65■□□□□ 0.42
PUDP-203ENST00000424830 NRG2O14511 850 aaPredicted RBP17.64■□□□□ 0.41
PUDP-203ENST00000424830 CHRNB1P11230 501 aa17.64■□□□□ 0.41
PUDP-203ENST00000424830 CNR2P34972 360 aa17.64■□□□□ 0.41
PUDP-203ENST00000424830 EPHA5P54756 1037 aa17.64■□□□□ 0.41
PUDP-203ENST00000424830 MLLT6P55198 1093 aaPredicted RBP17.64■□□□□ 0.41
PUDP-203ENST00000424830 PEX3P56589 373 aa17.64■□□□□ 0.41
PUDP-203ENST00000424830 SATB1Q01826 763 aa17.64■□□□□ 0.41
PUDP-203ENST00000424830 ZNF174Q15697 407 aa17.64■□□□□ 0.41
PUDP-203ENST00000424830 PPM1JQ5JR12 505 aa17.64■□□□□ 0.41
PUDP-203ENST00000424830 SPEM1Q8N4L4 309 aa17.64■□□□□ 0.41
PUDP-203ENST00000424830 TMEM134Q9H6X4 195 aa17.64■□□□□ 0.41
PUDP-203ENST00000424830 PTPRHQ9HD43 1115 aa17.64■□□□□ 0.41
PUDP-203ENST00000424830 SEMA4GQ9NTN9 838 aa17.64■□□□□ 0.41
PUDP-203ENST00000424830 CEP72Q9P209 647 aa17.64■□□□□ 0.41
PUDP-203ENST00000424830 KIAA1024Q9UPX6 916 aa17.64■□□□□ 0.41
PUDP-203ENST00000424830 ZFHX4Q86UP3 3567 aa17.63■□□□□ 0.41
PUDP-203ENST00000424830 HEPACAM2A8MVW5 462 aa17.63■□□□□ 0.41
PUDP-203ENST00000424830 FOXD2O60548 495 aaPredicted RBP17.63■□□□□ 0.41
PUDP-203ENST00000424830 MOSPD3O75425 235 aa17.63■□□□□ 0.41
PUDP-203ENST00000424830 HARSP12081 509 aaKnown RBP17.63■□□□□ 0.41
PUDP-203ENST00000424830 GJA1P17302 382 aa17.63■□□□□ 0.41
PUDP-203ENST00000424830 MARCKSP29966 332 aaPredicted RBP17.63■□□□□ 0.41
PUDP-203ENST00000424830 NPTX2P47972 431 aa17.63■□□□□ 0.41
PUDP-203ENST00000424830 PTGDRQ13258 359 aa17.63■□□□□ 0.41
PUDP-203ENST00000424830 PLD1Q13393 1074 aa17.63■□□□□ 0.41
PUDP-203ENST00000424830 TEAD2Q15562 447 aa17.63■□□□□ 0.41
PUDP-203ENST00000424830 CSRP2Q16527 193 aa17.63■□□□□ 0.41
PUDP-203ENST00000424830 ST3GAL2Q16842 350 aa17.63■□□□□ 0.41
PUDP-203ENST00000424830 MPZL3Q6UWV2 235 aa17.63■□□□□ 0.41
PUDP-203ENST00000424830 PRR23CQ6ZRP0 262 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms