RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 GRK3P35626 688 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 PIK3CBP42338 1070 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 PDE6CP51160 858 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 RNASE9P60153 205 aaKnown RBP4.16□□□□□ -1.74
SF3B1-205ENST00000424674 MRPS35P82673 323 aaKnown RBP4.16□□□□□ -1.74
SF3B1-205ENST00000424674 GRIN1Q05586 938 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 MOGSQ13724 837 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 PUM1Q14671 1186 aaKnown RBP eCLIP4.16□□□□□ -1.74
SF3B1-205ENST00000424674 POSTNQ15063 836 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 CNN3Q15417 329 aaKnown RBP4.16□□□□□ -1.74
SF3B1-205ENST00000424674 PKN2Q16513 984 aaKnown RBP4.16□□□□□ -1.74
SF3B1-205ENST00000424674 ODF2Q5BJF6 829 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 METTL24Q5JXM2 366 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 ARMC4Q5T2S8 1044 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 LRCH2Q5VUJ6 765 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 KLHL10Q6JEL2 608 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 APOA5Q6Q788 366 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 GLB1LQ6UWU2 654 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 GALNTL5Q7Z4T8 443 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 TTC30AQ86WT1 665 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 NBPF5PQ86XG9 351 aaPredicted RBP4.16□□□□□ -1.74
SF3B1-205ENST00000424674 EGFL6Q8IUX8 553 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 TRIM48Q8IWZ4 208 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 EFHBQ8N7U6 833 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 MIGA1Q8NAN2 632 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 CHST14Q8NCH0 376 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 PPP1R35Q8TAP8 253 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 PIP4K2CQ8TBX8 421 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 MGARPQ8TDB4 240 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 DCAF4Q8WV16 495 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 BRI3BPQ8WY22 251 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 PHKBQ93100 1093 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 SNX21Q969T3 373 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 C8orf49Q96NF6 230 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 SLF1Q9BQI6 1058 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 KRTAP3-1Q9BYR8 98 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 TXLNGYQ9BZA5 131 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 TMEM168Q9H0V1 697 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 VPS45Q9NRW7 570 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 HSPBP1Q9NZL4 362 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 HERC5Q9UII4 1024 aaKnown RBP4.16□□□□□ -1.74
SF3B1-205ENST00000424674 KNSTRNQ9Y448 316 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 PCDHA8Q9Y5H6 950 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 CCDC196A0A1B0GTZ2 297 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 PGPEP1LA6NFU8 196 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 GOLGA8AA7E2F4 631 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 GOLGA8BA8MQT2 603 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 H0Y3Z8 333 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 SLC27A2O14975 620 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 HOXC11O43248 304 aaPredicted RBP4.15□□□□□ -1.75
SF3B1-205ENST00000424674 NCK2O43639 380 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 SOAT2O75908 522 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 HSPA4LO95757 839 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 POLBP06746 335 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 THP07101 528 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 SRGAP2CP0DJJ0 459 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 P4HA1P13674 534 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 VEGFAP15692 232 aaPredicted RBP4.15□□□□□ -1.75
SF3B1-205ENST00000424674 ATP2A2P16615 1042 aaKnown RBP4.15□□□□□ -1.75
SF3B1-205ENST00000424674 CNTFP26441 200 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 IL12RB1P42701 662 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 SSR1P43307 286 aaKnown RBP4.15□□□□□ -1.75
SF3B1-205ENST00000424674 TNNT3P45378 269 aaPredicted RBP4.15□□□□□ -1.75
SF3B1-205ENST00000424674 MLLT6P55198 1093 aaPredicted RBP4.15□□□□□ -1.75
SF3B1-205ENST00000424674 SCAND1P57086 179 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 GUCY1A3Q02108 690 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 TLE2Q04725 743 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 FOXO1Q12778 655 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 TMED1Q13445 227 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 CUL4AQ13619 759 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 KIZQ2M2Z5 673 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 ZACNQ401N2 412 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 ANO6Q4KMQ2 910 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 FBXO47Q5MNV8 452 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 PHF19Q5T6S3 580 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 BROXQ5VW32 411 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 CPZQ66K79 652 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 VASNQ6EMK4 673 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 STYK1Q6J9G0 422 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 TRMT10BQ6PF06 316 aaKnown RBP4.15□□□□□ -1.75
SF3B1-205ENST00000424674 NPNTQ6UXI9 565 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 LBX2Q6XYB7 198 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 MCM10Q7L590 875 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 MTDHQ86UE4 582 aaKnown RBP4.15□□□□□ -1.75
SF3B1-205ENST00000424674 GALNT15Q8N3T1 639 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 TSPYL6Q8N831 410 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 IGSF22Q8N9C0 903 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 ADAMTS15Q8TE58 950 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 ASB12Q8WXK4 309 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 JADE3Q92613 823 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 ERCC4Q92889 916 aaPredicted RBP4.15□□□□□ -1.75
SF3B1-205ENST00000424674 MBD6Q96DN6 1003 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 C7orf26Q96N11 449 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 ZFYVE21Q9BQ24 234 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 KATNAL1Q9BW62 490 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 SSBP3Q9BWW4 388 aaPredicted RBP4.15□□□□□ -1.75
SF3B1-205ENST00000424674 MAGEH1Q9H213 219 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 IPPKQ9H8X2 491 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 DLL4Q9NR61 685 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 CCM2LQ9NUG4 571 aaPredicted RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms