RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 TMEM130Q8N3G9 435 aa27.44■■□□□ 1.98
TSPAN3-203ENST00000424443 CSGALNACT2Q8N6G5 542 aa27.44■■□□□ 1.98
TSPAN3-203ENST00000424443 MAFAQ8NHW3 353 aaPredicted RBP27.44■■□□□ 1.98
TSPAN3-203ENST00000424443 PARD3BQ8TEW8 1205 aa27.44■■□□□ 1.98
TSPAN3-203ENST00000424443 POP1Q99575 1024 aaKnown RBP27.44■■□□□ 1.98
TSPAN3-203ENST00000424443 MKNK1Q9BUB5 465 aa27.44■■□□□ 1.98
TSPAN3-203ENST00000424443 PCDHGC5Q9Y5F6 944 aa27.44■■□□□ 1.98
TSPAN3-203ENST00000424443 C2CD2LO14523 706 aa27.43■■□□□ 1.98
TSPAN3-203ENST00000424443 ITGB3P05106 788 aa27.43■■□□□ 1.98
TSPAN3-203ENST00000424443 PAX3P23760 479 aa27.43■■□□□ 1.98
TSPAN3-203ENST00000424443 TCEAL5Q5H9L2 206 aa27.43■■□□□ 1.98
TSPAN3-203ENST00000424443 RBM43Q6ZSC3 357 aaKnown RBP27.43■■□□□ 1.98
TSPAN3-203ENST00000424443 MRPL43Q8N983 215 aaKnown RBP27.43■■□□□ 1.98
TSPAN3-203ENST00000424443 C1orf127Q8N9H9 656 aa27.43■■□□□ 1.98
TSPAN3-203ENST00000424443 AUTS2Q8WXX7 1259 aa27.43■■□□□ 1.98
TSPAN3-203ENST00000424443 TTPALQ9BTX7 342 aa27.43■■□□□ 1.98
TSPAN3-203ENST00000424443 ANO9A1A5B4 782 aa27.42■■□□□ 1.98
TSPAN3-203ENST00000424443 IGFBP6P24592 240 aaPredicted RBP27.42■■□□□ 1.98
TSPAN3-203ENST00000424443 POLR2BP30876 1174 aaKnown RBP27.42■■□□□ 1.98
TSPAN3-203ENST00000424443 AP3M2P53677 418 aa27.42■■□□□ 1.98
TSPAN3-203ENST00000424443 SKIV2LQ15477 1246 aaKnown RBP27.42■■□□□ 1.98
TSPAN3-203ENST00000424443 FOXR2Q6PJQ5 311 aa27.42■■□□□ 1.98
TSPAN3-203ENST00000424443 DSTYKQ6XUX3 929 aa27.42■■□□□ 1.98
TSPAN3-203ENST00000424443 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.42■■□□□ 1.98
TSPAN3-203ENST00000424443 RNF168Q8IYW5 571 aaPredicted RBP27.42■■□□□ 1.98
TSPAN3-203ENST00000424443 OR5B17Q8NGF7 314 aa27.42■■□□□ 1.98
TSPAN3-203ENST00000424443 TMC2Q8TDI7 906 aa27.42■■□□□ 1.98
TSPAN3-203ENST00000424443 ZNF560Q96MR9 790 aa27.42■■□□□ 1.98
TSPAN3-203ENST00000424443 TLE6Q9H808 572 aa27.42■■□□□ 1.98
TSPAN3-203ENST00000424443 CHST7Q9NS84 486 aa27.42■■□□□ 1.98
TSPAN3-203ENST00000424443 TMEM63CQ9P1W3 806 aa27.42■■□□□ 1.98
TSPAN3-203ENST00000424443 AGAP1Q9UPQ3 857 aa27.42■■□□□ 1.98
TSPAN3-203ENST00000424443 PTPRJQ12913 1337 aa27.42■■□□□ 1.98
TSPAN3-203ENST00000424443 HIDE1A8MVS5 230 aa27.41■■□□□ 1.98
TSPAN3-203ENST00000424443 I3L4J1 428 aa27.41■■□□□ 1.98
TSPAN3-203ENST00000424443 PIRO00625 290 aa27.41■■□□□ 1.98
TSPAN3-203ENST00000424443 SLC16A3O15427 465 aaKnown RBP27.41■■□□□ 1.98
TSPAN3-203ENST00000424443 EFEMP2O95967 443 aa27.41■■□□□ 1.98
TSPAN3-203ENST00000424443 PNPLA4P41247 253 aa27.41■■□□□ 1.98
TSPAN3-203ENST00000424443 TAF6P49848 677 aa27.41■■□□□ 1.98
TSPAN3-203ENST00000424443 VAMP7P51809 220 aa27.41■■□□□ 1.98
TSPAN3-203ENST00000424443 RBP5P82980 135 aa27.41■■□□□ 1.98
TSPAN3-203ENST00000424443 DSG1Q02413 1049 aa27.41■■□□□ 1.98
TSPAN3-203ENST00000424443 KLHL40Q2TBA0 621 aa27.41■■□□□ 1.98
TSPAN3-203ENST00000424443 TTI2Q6NXR4 508 aa27.41■■□□□ 1.98
TSPAN3-203ENST00000424443 CD300LGQ6UXG3 332 aa27.41■■□□□ 1.98
TSPAN3-203ENST00000424443 RBM23Q86U06 439 aaKnown RBP27.41■■□□□ 1.98
TSPAN3-203ENST00000424443 RIN2Q8WYP3 895 aaPredicted RBP27.41■■□□□ 1.98
TSPAN3-203ENST00000424443 B3GALT6Q96L58 329 aa27.41■■□□□ 1.98
TSPAN3-203ENST00000424443 CEP63Q96MT8 703 aa27.41■■□□□ 1.98
TSPAN3-203ENST00000424443 EMILIN2Q9BXX0 1053 aa27.41■■□□□ 1.98
TSPAN3-203ENST00000424443 RWDD2AQ9UIY3 292 aa27.41■■□□□ 1.98
TSPAN3-203ENST00000424443 IRAK3Q9Y616 596 aa27.41■■□□□ 1.98
TSPAN3-203ENST00000424443 C2orf71A6NGG8 1288 aa27.41■■□□□ 1.98
TSPAN3-203ENST00000424443 LRRIQ3A6PVS8 624 aaPredicted RBP27.41■■□□□ 1.98
TSPAN3-203ENST00000424443 PPEF2O14830 753 aa27.41■■□□□ 1.98
TSPAN3-203ENST00000424443 PHACTR2O75167 634 aa27.41■■□□□ 1.98
TSPAN3-203ENST00000424443 FGFR1OPO95684 399 aaKnown RBP27.41■■□□□ 1.98
TSPAN3-203ENST00000424443 BFSP1Q12934 665 aa27.41■■□□□ 1.98
TSPAN3-203ENST00000424443 PTPN14Q15678 1187 aa27.41■■□□□ 1.98
TSPAN3-203ENST00000424443 DPCR1Q3MIW9 517 aa27.41■■□□□ 1.98
TSPAN3-203ENST00000424443 PDXDC1Q6P996 788 aa27.41■■□□□ 1.98
TSPAN3-203ENST00000424443 SUSD3Q96L08 255 aa27.41■■□□□ 1.98
TSPAN3-203ENST00000424443 IGFLR1Q9H665 355 aa27.41■■□□□ 1.98
TSPAN3-203ENST00000424443 NRIP1P48552 1158 aa27.4■■□□□ 1.98
TSPAN3-203ENST00000424443 LILRA4P59901 499 aa27.4■■□□□ 1.98
TSPAN3-203ENST00000424443 BIRC3Q13489 604 aa27.4■■□□□ 1.98
TSPAN3-203ENST00000424443 TPD52L1Q16890 204 aaPredicted RBP27.4■■□□□ 1.98
TSPAN3-203ENST00000424443 SKOR2Q2VWA4 1001 aaPredicted RBP27.4■■□□□ 1.98
TSPAN3-203ENST00000424443 SV2CQ496J9 727 aa27.4■■□□□ 1.98
TSPAN3-203ENST00000424443 TRAPPC11Q7Z392 1133 aa27.4■■□□□ 1.98
TSPAN3-203ENST00000424443 ADGRD2Q7Z7M1 963 aa27.4■■□□□ 1.98
TSPAN3-203ENST00000424443 ZC3H3Q8IXZ2 948 aaKnown RBP27.4■■□□□ 1.98
TSPAN3-203ENST00000424443 FAM84AQ96KN4 292 aa27.4■■□□□ 1.98
TSPAN3-203ENST00000424443 DUSP9Q99956 384 aaKnown RBP27.4■■□□□ 1.98
TSPAN3-203ENST00000424443 MYO7AQ13402 2215 aa27.39■■□□□ 1.98
TSPAN3-203ENST00000424443 ARHGEF37A1IGU5 675 aa27.39■■□□□ 1.98
TSPAN3-203ENST00000424443 SYN3O14994 580 aa27.39■■□□□ 1.98
TSPAN3-203ENST00000424443 CREMQ03060 361 aa27.39■■□□□ 1.98
TSPAN3-203ENST00000424443 TRPC3Q13507 836 aa27.39■■□□□ 1.98
TSPAN3-203ENST00000424443 RTP2Q5QGT7 225 aa27.39■■□□□ 1.98
TSPAN3-203ENST00000424443 KIAA0319Q5VV43 1072 aa27.39■■□□□ 1.98
TSPAN3-203ENST00000424443 GPR65Q8IYL9 337 aa27.39■■□□□ 1.98
TSPAN3-203ENST00000424443 LRRC52Q8N7C0 313 aa27.39■■□□□ 1.98
TSPAN3-203ENST00000424443 APPL2Q8NEU8 664 aa27.39■■□□□ 1.98
TSPAN3-203ENST00000424443 PLEKHO2Q8TD55 490 aa27.39■■□□□ 1.98
TSPAN3-203ENST00000424443 CDCA3Q99618 268 aaPredicted RBP27.39■■□□□ 1.98
TSPAN3-203ENST00000424443 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.39■■□□□ 1.98
TSPAN3-203ENST00000424443 ATG2AQ2TAZ0 1938 aa27.38■■□□□ 1.97
TSPAN3-203ENST00000424443 FSD2A1L4K1 749 aa27.38■■□□□ 1.97
TSPAN3-203ENST00000424443 IKBKBO14920 756 aa27.38■■□□□ 1.97
TSPAN3-203ENST00000424443 FGFR3P22607 806 aa27.38■■□□□ 1.97
TSPAN3-203ENST00000424443 TKTP29401 623 aaKnown RBP27.38■■□□□ 1.97
TSPAN3-203ENST00000424443 DLG4P78352 724 aa27.38■■□□□ 1.97
TSPAN3-203ENST00000424443 ENPEPQ07075 957 aa27.38■■□□□ 1.97
TSPAN3-203ENST00000424443 MYO1EQ12965 1108 aa27.38■■□□□ 1.97
TSPAN3-203ENST00000424443 CCDC40Q4G0X9 1142 aa27.38■■□□□ 1.97
TSPAN3-203ENST00000424443 FILIP1Q7Z7B0 1213 aa27.38■■□□□ 1.97
TSPAN3-203ENST00000424443 GZF1Q9H116 711 aaPredicted RBP27.38■■□□□ 1.97
TSPAN3-203ENST00000424443 ARMCX3Q9UH62 379 aaPredicted RBP27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms