RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 FAM86B2P0C5J1 330 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 SEMG2Q02383 582 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 FCHO2Q0JRZ9 810 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 TWF1Q12792 350 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 DUOXA1Q1HG43 343 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 ARHGAP15Q53QZ3 475 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 PRR16Q569H4 304 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 FSTL4Q6MZW2 842 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 SLC23A3Q6PIS1 610 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 CWC27Q6UX04 472 aaKnown RBP7.02□□□□□ -1.29
SDCBP-203ENST00000424270 ANKS3Q6ZW76 656 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 SYT13Q7L8C5 426 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 NIPA1Q7RTP0 329 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 RABEPKQ7Z6M1 372 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 MARCH9Q86YJ5 346 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 ARID3BQ8IVW6 561 aaPredicted RBP7.02□□□□□ -1.29
SDCBP-203ENST00000424270 GALNT15Q8N3T1 639 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 PSPC1Q8WXF1 523 aaKnown RBP7.02□□□□□ -1.29
SDCBP-203ENST00000424270 BAP1Q92560 729 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 PRORYQ9H606 182 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 TRPV4Q9HBA0 871 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 PLSCR2Q9NRY7 297 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 TMEM74BQ9NUR3 256 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 MTRRQ9UBK8 725 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 DKK4Q9UBT3 224 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 EBF1Q9UH73 591 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 HEMK1Q9Y5R4 338 aaPredicted RBP7.02□□□□□ -1.29
SDCBP-203ENST00000424270 AK5Q9Y6K8 562 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 ZNF462Q96JM2 2506 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 WDR81Q562E7 1941 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 FREM2Q5SZK8 3169 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 ARHGEF37A1IGU5 675 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 CCDC69A6NI79 296 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 ENO4A6NNW6 628 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 B8ZZF3 427 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 DHX15O43143 795 aaKnown RBP7.01□□□□□ -1.29
SDCBP-203ENST00000424270 GAS7O60861 476 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 B3GAT3O94766 335 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 PLEKHA8P1O95397 391 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 NPTXRO95502 500 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 HLA-EP13747 358 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 CD59P13987 128 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 DRD1P21728 446 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 U2AF2P26368 475 aaKnown RBP eCLIP7.01□□□□□ -1.29
SDCBP-203ENST00000424270 AXLP30530 894 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 HOXA11P31270 313 aaPredicted RBP7.01□□□□□ -1.29
SDCBP-203ENST00000424270 SREBF1P36956 1147 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 EIF2S3P41091 472 aaKnown RBP7.01□□□□□ -1.29
SDCBP-203ENST00000424270 PTGER3P43115 390 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 CSRP3P50461 194 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 JAK3P52333 1124 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 SEC13P55735 322 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 ROR1Q01973 937 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 UGCGQ16739 394 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 FBXO43Q4G163 708 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 XKR3Q5GH77 459 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 TMEM196Q5HYL7 178 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 JAKMIP3Q5VZ66 844 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 CC2D1AQ6P1N0 951 aaPredicted RBP7.01□□□□□ -1.29
SDCBP-203ENST00000424270 DEFB119Q8N690 84 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 RNF149Q8NC42 400 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 ZNF461Q8TAF7 563 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 BPIFB1Q8TDL5 484 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 PRPF31Q8WWY3 499 aaKnown RBP7.01□□□□□ -1.29
SDCBP-203ENST00000424270 RLN3Q8WXF3 142 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 TMEM143Q96AN5 459 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 RSPRY1Q96DX4 576 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 CCDC51Q96ER9 411 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 P2RY13Q9BPV8 354 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 TRIM4Q9C037 500 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 CSRNP2Q9H175 543 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 ATXN3LQ9H3M9 355 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 DCTPP1Q9H773 170 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 PRDM16Q9HAZ2 1276 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 IFT122Q9HBG6 1241 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 SENP2Q9HC62 589 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 DNMT3LQ9UJW3 386 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 TPCN1Q9ULQ1 816 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 SPAG17Q6Q759 2223 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 COL4A2P08572 1712 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 MYO18BQ8IUG5 2567 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 NCANO14594 1321 aa7.01□□□□□ -1.29
SDCBP-203ENST00000424270 PDCD11Q14690 1871 aaKnown RBP7□□□□□ -1.29
SDCBP-203ENST00000424270 F5P12259 2224 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 DOCK6Q96HP0 2047 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 LAMA5O15230 3695 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 SMCO2A6NFE2 343 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 I3L4J1 428 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 ERVH48-1M5A8F1 160 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 TULP1O00294 542 aaPredicted RBP7□□□□□ -1.29
SDCBP-203ENST00000424270 ARHGAP33O14559 1287 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 TSPAN1O60635 241 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 MAFO75444 373 aaPredicted RBP7□□□□□ -1.29
SDCBP-203ENST00000424270 DDAH1O94760 285 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 THP07101 528 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 SERPINF2P08697 491 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 CPB1P15086 417 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 RXRAP19793 462 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 ITPKAP23677 461 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 SMARCA1P28370 1054 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms