RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 TPCN1Q9ULQ1 816 aa3.26□□□□□ -1.89
PMS1-209ENST00000424059 ATP8A1Q9Y2Q0 1164 aa3.26□□□□□ -1.89
PMS1-209ENST00000424059 ATP6V0A2Q9Y487 856 aa3.26□□□□□ -1.89
PMS1-209ENST00000424059 SQORQ9Y6N5 450 aa3.26□□□□□ -1.89
PMS1-209ENST00000424059 RNF123Q5XPI4 1314 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 PRRT4C9JH25 899 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 hCG_1984214I3L0E3 225 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 DVL2O14641 736 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 KIF3BO15066 747 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 FIBPO43427 364 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 TCEA3O75764 348 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 GLRX3O76003 335 aaKnown RBP3.25□□□□□ -1.89
PMS1-209ENST00000424059 KRT37O76014 449 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 TOX4O94842 621 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 KIAA0754O94854 1291 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 ITGB1P05556 798 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 GYS1P13807 737 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 GNAT2P19087 354 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 KIR2DL3P43628 341 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 WNT3AP56704 352 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 RWDD2BP57060 319 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 UBXN2AP68543 259 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 SHROOM1Q2M3G4 852 aaPredicted RBP3.25□□□□□ -1.89
PMS1-209ENST00000424059 MUM1Q2TAK8 710 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 SPDYCQ5MJ68 293 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 HHATQ5VTY9 493 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 PRAMEF9Q5VWM5 478 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 AP1ARQ63HQ0 302 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 KIAA1841Q6NSI8 718 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 DPY19L2P1Q6NXN4 242 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 IRGCQ6NXR0 463 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 ERAP2Q6P179 960 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 PLBD1Q6P4A8 553 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 MTHFD1LQ6UB35 978 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 UBE2R2Q712K3 238 aaPredicted RBP3.25□□□□□ -1.89
PMS1-209ENST00000424059 LRRC49Q8IUZ0 686 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 PHYKPLQ8IUZ5 450 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 EFCAB13Q8IY85 973 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 ZNF276Q8N554 614 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 ZNF713Q8N859 430 aaPredicted RBP3.25□□□□□ -1.89
PMS1-209ENST00000424059 NKAIN3Q8N8D7 197 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 CCDC26Q8TAB7 109 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 C1orf74Q96LT6 269 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 ZNF512Q96ME7 567 aaPredicted RBP3.25□□□□□ -1.89
PMS1-209ENST00000424059 MAK16Q9BXY0 300 aaKnown RBP3.25□□□□□ -1.89
PMS1-209ENST00000424059 DIAPH3Q9NSV4 1193 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 RSPH14Q9UHP6 348 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 CLCA2Q9UQC9 943 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 SMARCA2P51531 1590 aa3.25□□□□□ -1.89
PMS1-209ENST00000424059 LINC00854A0A1B0GVQ3 168 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 GRXCR1A8MXD5 290 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 CBX4O00257 560 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 ZSCAN9O15535 394 aaPredicted RBP3.24□□□□□ -1.89
PMS1-209ENST00000424059 AKR1B10O60218 316 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 RFPL3O75679 317 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 LMNAP02545 664 aaKnown RBP3.24□□□□□ -1.89
PMS1-209ENST00000424059 GCP02774 474 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 MYL3P08590 195 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 CCNCP24863 283 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 KIF5BP33176 963 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 ADRA1BP35368 520 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 CSE1LP55060 971 aaKnown RBP3.24□□□□□ -1.89
PMS1-209ENST00000424059 COL10A1Q03692 680 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 DEUP1Q05D60 604 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 BRD3Q15059 726 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 PTPAQ15257 358 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 PTPN14Q15678 1187 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 SEPT7Q16181 437 aaKnown RBP3.24□□□□□ -1.89
PMS1-209ENST00000424059 PDCD2Q16342 344 aaPredicted RBP3.24□□□□□ -1.89
PMS1-209ENST00000424059 SLC4A8Q2Y0W8 1093 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 FAM133BQ5BKY9 247 aaKnown RBP3.24□□□□□ -1.89
PMS1-209ENST00000424059 WDR45BQ5MNZ6 344 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 TSHZ3Q63HK5 1081 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 IQSEC1Q6DN90 963 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 LRRC55Q6ZSA7 311 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 PRIMA1Q86XR5 153 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 KIF18BQ86Y91 864 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 CCDC65Q8IXS2 484 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 GSDMBQ8TAX9 411 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 ANKRD49Q8WVL7 239 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 ATXN2LQ8WWM7 1075 aaKnown RBP3.24□□□□□ -1.89
PMS1-209ENST00000424059 ST8SIA2Q92186 375 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 ZNF75CPQ92670 426 aaPredicted RBP3.24□□□□□ -1.89
PMS1-209ENST00000424059 UIMC1Q96RL1 719 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.24□□□□□ -1.89
PMS1-209ENST00000424059 ZNF304Q9HCX3 659 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 SH3GLB2Q9NR46 395 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 NINLQ9Y2I6 1382 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 PTPDC1A2A3K4 754 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 FOXN3O00409 490 aaPredicted RBP3.24□□□□□ -1.89
PMS1-209ENST00000424059 RECQL4O94761 1208 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 IDEP14735 1019 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 GYPEP15421 78 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 ADD2P35612 726 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 STAT3P40763 770 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 PAPOLAP51003 745 aaKnown RBP3.24□□□□□ -1.89
PMS1-209ENST00000424059 RPS6KA3P51812 740 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 HSD17B7P56937 341 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 SLMAPQ14BN4 828 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 ARHGEF6Q15052 776 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms