RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 C1RP00736 705 aa19.97■□□□□ 0.79
HDAC6-205ENST00000423941 CNPP09543 421 aaKnown RBP19.97■□□□□ 0.79
HDAC6-205ENST00000423941 CCNE1P24864 410 aa19.97■□□□□ 0.79
HDAC6-205ENST00000423941 RPL13P26373 211 aaKnown RBP19.97■□□□□ 0.79
HDAC6-205ENST00000423941 LTBRP36941 435 aa19.97■□□□□ 0.79
HDAC6-205ENST00000423941 BRCC3P46736 316 aa19.97■□□□□ 0.79
HDAC6-205ENST00000423941 NRIP1P48552 1158 aa19.97■□□□□ 0.79
HDAC6-205ENST00000423941 PMS1P54277 932 aaKnown RBP19.97■□□□□ 0.79
HDAC6-205ENST00000423941 LILRA4P59901 499 aa19.97■□□□□ 0.79
HDAC6-205ENST00000423941 MRPL58Q14197 206 aaKnown RBP19.97■□□□□ 0.79
HDAC6-205ENST00000423941 RTP2Q5QGT7 225 aa19.97■□□□□ 0.79
HDAC6-205ENST00000423941 FAM171A1Q5VUB5 890 aa19.97■□□□□ 0.79
HDAC6-205ENST00000423941 ANKRD40Q6AI12 368 aa19.97■□□□□ 0.79
HDAC6-205ENST00000423941 RBM43Q6ZSC3 357 aaKnown RBP19.97■□□□□ 0.79
HDAC6-205ENST00000423941 LNX1Q8TBB1 728 aaPredicted RBP19.97■□□□□ 0.79
HDAC6-205ENST00000423941 TMC2Q8TDI7 906 aa19.97■□□□□ 0.79
HDAC6-205ENST00000423941 PPM1EQ8WY54 764 aa19.97■□□□□ 0.79
HDAC6-205ENST00000423941 ZNF516Q92618 1163 aa19.97■□□□□ 0.79
HDAC6-205ENST00000423941 TTPALQ9BTX7 342 aa19.97■□□□□ 0.79
HDAC6-205ENST00000423941 SYN3O14994 580 aa19.96■□□□□ 0.79
HDAC6-205ENST00000423941 PER2O15055 1255 aa19.96■□□□□ 0.79
HDAC6-205ENST00000423941 TBC1D4O60343 1298 aa19.96■□□□□ 0.79
HDAC6-205ENST00000423941 CLASP2O75122 1294 aaKnown RBP19.96■□□□□ 0.79
HDAC6-205ENST00000423941 AKAP3O75969 853 aa19.96■□□□□ 0.79
HDAC6-205ENST00000423941 GLP2RO95838 553 aa19.96■□□□□ 0.79
HDAC6-205ENST00000423941 URODP06132 367 aa19.96■□□□□ 0.79
HDAC6-205ENST00000423941 NR2F2P24468 414 aa19.96■□□□□ 0.79
HDAC6-205ENST00000423941 MCM4P33991 863 aa19.96■□□□□ 0.79
HDAC6-205ENST00000423941 LRRC63Q05C16 580 aa19.96■□□□□ 0.79
HDAC6-205ENST00000423941 ADAM9Q13443 819 aa19.96■□□□□ 0.79
HDAC6-205ENST00000423941 DUOXA2Q1HG44 320 aa19.96■□□□□ 0.79
HDAC6-205ENST00000423941 SCARA3Q6AZY7 606 aa19.96■□□□□ 0.79
HDAC6-205ENST00000423941 OR5B17Q8NGF7 314 aa19.96■□□□□ 0.79
HDAC6-205ENST00000423941 SLC22A17Q8WUG5 538 aa19.96■□□□□ 0.79
HDAC6-205ENST00000423941 B3GALT6Q96L58 329 aa19.96■□□□□ 0.79
HDAC6-205ENST00000423941 KLHL5Q96PQ7 755 aa19.96■□□□□ 0.79
HDAC6-205ENST00000423941 CGRRF1Q99675 332 aa19.96■□□□□ 0.79
HDAC6-205ENST00000423941 MKNK1Q9BUB5 465 aa19.96■□□□□ 0.79
HDAC6-205ENST00000423941 NUP62CLQ9H1M0 184 aa19.96■□□□□ 0.79
HDAC6-205ENST00000423941 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.96■□□□□ 0.79
HDAC6-205ENST00000423941 SIX4Q9UIU6 781 aa19.96■□□□□ 0.79
HDAC6-205ENST00000423941 COG5Q9UP83 839 aa19.96■□□□□ 0.79
HDAC6-205ENST00000423941 MTCL1Q9Y4B5 1905 aaKnown RBP19.96■□□□□ 0.79
HDAC6-205ENST00000423941 BRWD1Q9NSI6 2320 aa19.96■□□□□ 0.79
HDAC6-205ENST00000423941 XIRP2A4UGR9 3374 aa19.95■□□□□ 0.78
HDAC6-205ENST00000423941 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.95■□□□□ 0.78
HDAC6-205ENST00000423941 BIN1O00499 593 aa19.95■□□□□ 0.78
HDAC6-205ENST00000423941 PSMA7O14818 248 aa19.95■□□□□ 0.78
HDAC6-205ENST00000423941 SPTLC1O15269 473 aa19.95■□□□□ 0.78
HDAC6-205ENST00000423941 CSPG5O95196 566 aa19.95■□□□□ 0.78
HDAC6-205ENST00000423941 TKTP29401 623 aaKnown RBP19.95■□□□□ 0.78
HDAC6-205ENST00000423941 TFAMQ00059 246 aaKnown RBP19.95■□□□□ 0.78
HDAC6-205ENST00000423941 TTI2Q6NXR4 508 aa19.95■□□□□ 0.78
HDAC6-205ENST00000423941 PDXDC1Q6P996 788 aa19.95■□□□□ 0.78
HDAC6-205ENST00000423941 RBM23Q86U06 439 aaKnown RBP19.95■□□□□ 0.78
HDAC6-205ENST00000423941 VN1R2Q8NFZ6 395 aa19.95■□□□□ 0.78
HDAC6-205ENST00000423941 NOC3LQ8WTT2 800 aaKnown RBP19.95■□□□□ 0.78
HDAC6-205ENST00000423941 POP1Q99575 1024 aaKnown RBP19.95■□□□□ 0.78
HDAC6-205ENST00000423941 PRDM6Q9NQX0 595 aa19.95■□□□□ 0.78
HDAC6-205ENST00000423941 ITGA11Q9UKX5 1188 aa19.95■□□□□ 0.78
HDAC6-205ENST00000423941 PLXNA3P51805 1871 aa19.94■□□□□ 0.78
HDAC6-205ENST00000423941 I3L4J1 428 aa19.94■□□□□ 0.78
HDAC6-205ENST00000423941 TEX28O15482 410 aa19.94■□□□□ 0.78
HDAC6-205ENST00000423941 LINC01565O15544 149 aa19.94■□□□□ 0.78
HDAC6-205ENST00000423941 MBD3O95983 291 aa19.94■□□□□ 0.78
HDAC6-205ENST00000423941 FKBP3Q00688 224 aaKnown RBP19.94■□□□□ 0.78
HDAC6-205ENST00000423941 STIM1Q13586 685 aa19.94■□□□□ 0.78
HDAC6-205ENST00000423941 C1orf220Q5T0J3 134 aa19.94■□□□□ 0.78
HDAC6-205ENST00000423941 KIAA1841Q6NSI8 718 aa19.94■□□□□ 0.78
HDAC6-205ENST00000423941 LRRC52Q8N7C0 313 aa19.94■□□□□ 0.78
HDAC6-205ENST00000423941 RIN2Q8WYP3 895 aaPredicted RBP19.94■□□□□ 0.78
HDAC6-205ENST00000423941 HLA-CQ95604 372 aa19.94■□□□□ 0.78
HDAC6-205ENST00000423941 FAM84AQ96KN4 292 aa19.94■□□□□ 0.78
HDAC6-205ENST00000423941 DUSP9Q99956 384 aaKnown RBP19.94■□□□□ 0.78
HDAC6-205ENST00000423941 CLSTN3Q9BQT9 956 aa19.94■□□□□ 0.78
HDAC6-205ENST00000423941 EMILIN2Q9BXX0 1053 aa19.94■□□□□ 0.78
HDAC6-205ENST00000423941 MTMR12Q9C0I1 747 aa19.94■□□□□ 0.78
HDAC6-205ENST00000423941 PCDHB8Q9UN66 801 aa19.94■□□□□ 0.78
HDAC6-205ENST00000423941 FRMD4BQ9Y2L6 1034 aa19.94■□□□□ 0.78
HDAC6-205ENST00000423941 NUB1Q9Y5A7 615 aa19.94■□□□□ 0.78
HDAC6-205ENST00000423941 BACE2Q9Y5Z0 518 aa19.94■□□□□ 0.78
HDAC6-205ENST00000423941 IKBKBO14920 756 aa19.93■□□□□ 0.78
HDAC6-205ENST00000423941 ITGB3P05106 788 aa19.93■□□□□ 0.78
HDAC6-205ENST00000423941 PSMC2P35998 433 aaKnown RBP19.93■□□□□ 0.78
HDAC6-205ENST00000423941 CLCN4P51793 760 aa19.93■□□□□ 0.78
HDAC6-205ENST00000423941 CREMQ03060 361 aa19.93■□□□□ 0.78
HDAC6-205ENST00000423941 CEP135Q66GS9 1140 aa19.93■□□□□ 0.78
HDAC6-205ENST00000423941 LILRA6Q6PI73 481 aa19.93■□□□□ 0.78
HDAC6-205ENST00000423941 PRSS55Q6UWB4 352 aaPredicted RBP19.93■□□□□ 0.78
HDAC6-205ENST00000423941 ANKS3Q6ZW76 656 aa19.93■□□□□ 0.78
HDAC6-205ENST00000423941 TRAPPC11Q7Z392 1133 aa19.93■□□□□ 0.78
HDAC6-205ENST00000423941 CCDC127Q96BQ5 260 aa19.93■□□□□ 0.78
HDAC6-205ENST00000423941 ANKRD36BP1Q96IX9 119 aa19.93■□□□□ 0.78
HDAC6-205ENST00000423941 MSLNLQ96KJ4 702 aa19.93■□□□□ 0.78
HDAC6-205ENST00000423941 FNBP1Q96RU3 617 aa19.93■□□□□ 0.78
HDAC6-205ENST00000423941 UBE2ZQ9H832 354 aaPredicted RBP19.93■□□□□ 0.78
HDAC6-205ENST00000423941 CLEC1BQ9P126 229 aa19.93■□□□□ 0.78
HDAC6-205ENST00000423941 MTRRQ9UBK8 725 aa19.93■□□□□ 0.78
HDAC6-205ENST00000423941 HCFC2Q9Y5Z7 792 aa19.93■□□□□ 0.78
HDAC6-205ENST00000423941 TRIM49BA6NDI0 452 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms