RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 AP3B2Q13367 1082 aa11.66□□□□□ -0.54
TNC-203ENST00000423613 PFKFB3Q16875 520 aaPredicted RBP11.66□□□□□ -0.54
TNC-203ENST00000423613 PASD1Q8IV76 773 aa11.66□□□□□ -0.54
TNC-203ENST00000423613 BEST2Q8NFU1 509 aa11.66□□□□□ -0.54
TNC-203ENST00000423613 WDR60Q8WVS4 1066 aa11.66□□□□□ -0.54
TNC-203ENST00000423613 DNAJC7Q99615 494 aa11.66□□□□□ -0.54
TNC-203ENST00000423613 CPVLQ9H3G5 476 aa11.66□□□□□ -0.54
TNC-203ENST00000423613 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.66□□□□□ -0.54
TNC-203ENST00000423613 EFCAB6Q5THR3 1501 aa11.66□□□□□ -0.54
TNC-203ENST00000423613 GH2P01242 217 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 NR3C1P04150 777 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 CPA2P48052 419 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 TNFAIP2Q03169 654 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 APOBEC3FQ8IUX4 373 aaKnown RBP11.65□□□□□ -0.54
TNC-203ENST00000423613 RAD54LQ92698 747 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 TAF1DQ9H5J8 278 aaPredicted RBP11.65□□□□□ -0.54
TNC-203ENST00000423613 CACNA2D2Q9NY47 1150 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 MAP3K20Q9NYL2 800 aaKnown RBP11.65□□□□□ -0.54
TNC-203ENST00000423613 BTBD7Q9P203 1132 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 SYNGAP1Q96PV0 1343 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 FCER1AP12319 257 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 PRCPP42785 496 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 STX12Q86Y82 276 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 CENPTQ96BT3 561 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 MARCOQ9UEW3 520 aaPredicted RBP11.65□□□□□ -0.54
TNC-203ENST00000423613 DTNAQ9Y4J8 743 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 TTC37Q6PGP7 1564 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 PDIA2Q13087 525 aaKnown RBP11.65□□□□□ -0.54
TNC-203ENST00000423613 ULK4Q96C45 1275 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 SPON2Q9BUD6 331 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 H2AFY2Q9P0M6 372 aaPredicted RBP11.65□□□□□ -0.54
TNC-203ENST00000423613 AFF2P51816 1311 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 PIK3R2O00459 728 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 TARSP26639 723 aaKnown RBP11.65□□□□□ -0.54
TNC-203ENST00000423613 OASLQ15646 514 aaKnown RBP11.65□□□□□ -0.54
TNC-203ENST00000423613 ZNF667Q5HYK9 610 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 UBE2Q1Q7Z7E8 422 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 RAB42Q8N4Z0 105 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 ZNF579Q8NAF0 562 aaKnown RBP11.65□□□□□ -0.54
TNC-203ENST00000423613 GIMAP8Q8ND71 665 aaPredicted RBP11.65□□□□□ -0.54
TNC-203ENST00000423613 DCAF4Q8WV16 495 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 DEPDC7Q96QD5 511 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 TSSK1BQ9BXA7 367 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 SP110Q9HB58 689 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 NDFIP2Q9NV92 336 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 STK36Q9NRP7 1315 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 GCLMP48507 274 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 ST8SIA6P61647 398 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 ABATP80404 500 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 ZNF211Q13398 564 aaPredicted RBP11.65□□□□□ -0.54
TNC-203ENST00000423613 ZSWIM7Q19AV6 140 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 EPHA10Q5JZY3 1008 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 TMEM179Q6ZVK1 233 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 FOXP4Q8IVH2 680 aaPredicted RBP11.65□□□□□ -0.54
TNC-203ENST00000423613 OTUB1Q96FW1 271 aaPredicted RBP11.65□□□□□ -0.54
TNC-203ENST00000423613 VPS39Q96JC1 886 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 IL1RL2Q9HB29 575 aa11.65□□□□□ -0.54
TNC-203ENST00000423613 RGS20O76081 388 aa11.64□□□□□ -0.55
TNC-203ENST00000423613 YWHABP31946 246 aaKnown RBP11.64□□□□□ -0.55
TNC-203ENST00000423613 CRKP46108 304 aa11.64□□□□□ -0.55
TNC-203ENST00000423613 JAK3P52333 1124 aa11.64□□□□□ -0.55
TNC-203ENST00000423613 PRKCQQ04759 706 aa11.64□□□□□ -0.55
TNC-203ENST00000423613 KLHL12Q53G59 568 aa11.64□□□□□ -0.55
TNC-203ENST00000423613 TTC8Q8TAM2 541 aa11.64□□□□□ -0.55
TNC-203ENST00000423613 SPATA33Q96N06 139 aa11.64□□□□□ -0.55
TNC-203ENST00000423613 PDCD10Q9BUL8 212 aa11.64□□□□□ -0.55
TNC-203ENST00000423613 STX7O15400 261 aaKnown RBP11.64□□□□□ -0.55
TNC-203ENST00000423613 NMT2O60551 498 aa11.64□□□□□ -0.55
TNC-203ENST00000423613 CLASP2O75122 1294 aaKnown RBP11.64□□□□□ -0.55
TNC-203ENST00000423613 LDHAP00338 332 aaKnown RBP11.64□□□□□ -0.55
TNC-203ENST00000423613 CYBBP04839 570 aa11.64□□□□□ -0.55
TNC-203ENST00000423613 SSTR3P32745 418 aaPredicted RBP11.64□□□□□ -0.55
TNC-203ENST00000423613 SERPINB8P50452 374 aa11.64□□□□□ -0.55
TNC-203ENST00000423613 COASYQ13057 564 aa11.64□□□□□ -0.55
TNC-203ENST00000423613 ZNF568Q3ZCX4 644 aa11.64□□□□□ -0.55
TNC-203ENST00000423613 ARMC4Q5T2S8 1044 aa11.64□□□□□ -0.55
TNC-203ENST00000423613 PRPF39Q86UA1 669 aaKnown RBP11.64□□□□□ -0.55
TNC-203ENST00000423613 ZNF483Q8TF39 744 aaPredicted RBP11.64□□□□□ -0.55
TNC-203ENST00000423613 ANKRD49Q8WVL7 239 aa11.64□□□□□ -0.55
TNC-203ENST00000423613 SEPT1Q8WYJ6 367 aa11.64□□□□□ -0.55
TNC-203ENST00000423613 EGFL8Q99944 293 aa11.64□□□□□ -0.55
TNC-203ENST00000423613 TMEM47Q9BQJ4 181 aa11.64□□□□□ -0.55
TNC-203ENST00000423613 MRPL1Q9BYD6 325 aaKnown RBP11.64□□□□□ -0.55
TNC-203ENST00000423613 ATAD3AQ9NVI7 634 aa11.64□□□□□ -0.55
TNC-203ENST00000423613 SENP1Q9P0U3 644 aa11.64□□□□□ -0.55
TNC-203ENST00000423613 DBR1Q9UK59 544 aaKnown RBP11.64□□□□□ -0.55
TNC-203ENST00000423613 ROBO2Q9HCK4 1378 aa11.64□□□□□ -0.55
TNC-203ENST00000423613 MIF4GDA9UHW6 222 aaKnown RBP11.64□□□□□ -0.55
TNC-203ENST00000423613 CFAP99D6REC4 459 aa11.64□□□□□ -0.55
TNC-203ENST00000423613 ZBTB5O15062 677 aa11.64□□□□□ -0.55
TNC-203ENST00000423613 PSTPIP1O43586 416 aa11.64□□□□□ -0.55
TNC-203ENST00000423613 ATP9AO75110 1047 aa11.64□□□□□ -0.55
TNC-203ENST00000423613 BAIAP3O94812 1187 aa11.64□□□□□ -0.55
TNC-203ENST00000423613 PRELPP51888 382 aa11.64□□□□□ -0.55
TNC-203ENST00000423613 GPC5P78333 572 aa11.64□□□□□ -0.55
TNC-203ENST00000423613 ARHGEF5Q12774 1597 aa11.64□□□□□ -0.55
TNC-203ENST00000423613 NME3Q13232 169 aa11.64□□□□□ -0.55
TNC-203ENST00000423613 NFIL3Q16649 462 aa11.64□□□□□ -0.55
TNC-203ENST00000423613 FASTKD1Q53R41 847 aaKnown RBP11.64□□□□□ -0.55
TNC-203ENST00000423613 SDE2Q6IQ49 451 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms