RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 PCDHA2Q9Y5H9 948 aa6.64□□□□□ -1.35
LINC00458-201ENST00000423442 RFX7Q2KHR2 1363 aa6.64□□□□□ -1.35
LINC00458-201ENST00000423442 MEFVO15553 781 aaPredicted RBP6.63□□□□□ -1.35
LINC00458-201ENST00000423442 TADA3O75528 432 aa6.63□□□□□ -1.35
LINC00458-201ENST00000423442 SNRPB2P08579 225 aaKnown RBP6.63□□□□□ -1.35
LINC00458-201ENST00000423442 CCND3P30281 292 aaPredicted RBP6.63□□□□□ -1.35
LINC00458-201ENST00000423442 MAPK4P31152 587 aa6.63□□□□□ -1.35
LINC00458-201ENST00000423442 SHMT1P34896 483 aa6.63□□□□□ -1.35
LINC00458-201ENST00000423442 PDE1AP54750 535 aa6.63□□□□□ -1.35
LINC00458-201ENST00000423442 RRP1BQ14684 758 aaKnown RBP6.63□□□□□ -1.35
LINC00458-201ENST00000423442 LTBP2Q14767 1821 aa6.63□□□□□ -1.35
LINC00458-201ENST00000423442 NCAPHQ15003 741 aa6.63□□□□□ -1.35
LINC00458-201ENST00000423442 SBK1Q52WX2 424 aa6.63□□□□□ -1.35
LINC00458-201ENST00000423442 WDR78Q5VTH9 848 aa6.63□□□□□ -1.35
LINC00458-201ENST00000423442 TSHZ3Q63HK5 1081 aa6.63□□□□□ -1.35
LINC00458-201ENST00000423442 TMC5Q6UXY8 1006 aa6.63□□□□□ -1.35
LINC00458-201ENST00000423442 CHD1LQ86WJ1 897 aa6.63□□□□□ -1.35
LINC00458-201ENST00000423442 ANAPC16Q96DE5 110 aa6.63□□□□□ -1.35
LINC00458-201ENST00000423442 DYNLL2Q96FJ2 89 aa6.63□□□□□ -1.35
LINC00458-201ENST00000423442 CHAMP1Q96JM3 812 aa6.63□□□□□ -1.35
LINC00458-201ENST00000423442 PAGR1Q9BTK6 254 aa6.63□□□□□ -1.35
LINC00458-201ENST00000423442 TANGO6Q9C0B7 1094 aa6.63□□□□□ -1.35
LINC00458-201ENST00000423442 SENP6Q9GZR1 1112 aaPredicted RBP6.63□□□□□ -1.35
LINC00458-201ENST00000423442 KIAA1683Q9H0B3 1180 aa6.63□□□□□ -1.35
LINC00458-201ENST00000423442 NAPBQ9H115 298 aa6.63□□□□□ -1.35
LINC00458-201ENST00000423442 HELLSQ9NRZ9 838 aa6.63□□□□□ -1.35
LINC00458-201ENST00000423442 ZDHHC9Q9Y397 364 aa6.63□□□□□ -1.35
LINC00458-201ENST00000423442 FRMPD3Q5JV73 1810 aa6.62□□□□□ -1.35
LINC00458-201ENST00000423442 GSG1L2A8MUP6 293 aa6.62□□□□□ -1.35
LINC00458-201ENST00000423442 PATE3B3GLJ2 98 aa6.62□□□□□ -1.35
LINC00458-201ENST00000423442 HIP1O00291 1037 aa6.62□□□□□ -1.35
LINC00458-201ENST00000423442 GPAA1O43292 621 aa6.62□□□□□ -1.35
LINC00458-201ENST00000423442 ITGAVP06756 1048 aa6.62□□□□□ -1.35
LINC00458-201ENST00000423442 CYP2D6P10635 497 aa6.62□□□□□ -1.35
LINC00458-201ENST00000423442 HOXC12P31275 282 aa6.62□□□□□ -1.35
LINC00458-201ENST00000423442 HERVK_113P62684 666 aa6.62□□□□□ -1.35
LINC00458-201ENST00000423442 KCNAB2Q13303 367 aa6.62□□□□□ -1.35
LINC00458-201ENST00000423442 PLS1Q14651 629 aa6.62□□□□□ -1.35
LINC00458-201ENST00000423442 MCMDC2Q4G0Z9 681 aa6.62□□□□□ -1.35
LINC00458-201ENST00000423442 PHF19Q5T6S3 580 aa6.62□□□□□ -1.35
LINC00458-201ENST00000423442 TRMT10BQ6PF06 316 aaKnown RBP6.62□□□□□ -1.35
LINC00458-201ENST00000423442 CATSPERGQ6ZRH7 1159 aa6.62□□□□□ -1.35
LINC00458-201ENST00000423442 C16orf86Q6ZW13 317 aa6.62□□□□□ -1.35
LINC00458-201ENST00000423442 NT5DC4Q86YG4 428 aa6.62□□□□□ -1.35
LINC00458-201ENST00000423442 IFNL3Q8IZI9 196 aa6.62□□□□□ -1.35
LINC00458-201ENST00000423442 LPAR1Q92633 364 aa6.62□□□□□ -1.35
LINC00458-201ENST00000423442 OSBP2Q969R2 916 aa6.62□□□□□ -1.35
LINC00458-201ENST00000423442 RPAP3Q9H6T3 665 aaPredicted RBP6.62□□□□□ -1.35
LINC00458-201ENST00000423442 DNAJC18Q9H819 358 aa6.62□□□□□ -1.35
LINC00458-201ENST00000423442 SLC5A4Q9NY91 659 aa6.62□□□□□ -1.35
LINC00458-201ENST00000423442 FTSJ1Q9UET6 329 aa6.62□□□□□ -1.35
LINC00458-201ENST00000423442 RABGAP1Q9Y3P9 1069 aa6.62□□□□□ -1.35
LINC00458-201ENST00000423442 HS3ST3A1Q9Y663 406 aa6.62□□□□□ -1.35
LINC00458-201ENST00000423442 NAV1Q8NEY1 1877 aa6.62□□□□□ -1.35
LINC00458-201ENST00000423442 CYP2D7A0A087X1C5 515 aa6.61□□□□□ -1.35
LINC00458-201ENST00000423442 STRNO43815 780 aa6.61□□□□□ -1.35
LINC00458-201ENST00000423442 FLOT1O75955 427 aa6.61□□□□□ -1.35
LINC00458-201ENST00000423442 IGHDP01880 384 aa6.61□□□□□ -1.35
LINC00458-201ENST00000423442 TSPY3P0CV98 308 aa6.61□□□□□ -1.35
LINC00458-201ENST00000423442 TSPY8P0CW00 308 aa6.61□□□□□ -1.35
LINC00458-201ENST00000423442 EEF2P13639 858 aaKnown RBP6.61□□□□□ -1.35
LINC00458-201ENST00000423442 ZKSCAN1P17029 563 aaPredicted RBP6.61□□□□□ -1.35
LINC00458-201ENST00000423442 SELENOPP49908 381 aa6.61□□□□□ -1.35
LINC00458-201ENST00000423442 IRX6P78412 446 aaPredicted RBP6.61□□□□□ -1.35
LINC00458-201ENST00000423442 SMAD3P84022 425 aaKnown RBP6.61□□□□□ -1.35
LINC00458-201ENST00000423442 NUCB1Q02818 461 aa6.61□□□□□ -1.35
LINC00458-201ENST00000423442 ICA1Q05084 483 aa6.61□□□□□ -1.35
LINC00458-201ENST00000423442 GABPAQ06546 454 aa6.61□□□□□ -1.35
LINC00458-201ENST00000423442 NFATC3Q12968 1075 aa6.61□□□□□ -1.35
LINC00458-201ENST00000423442 LSAMPQ13449 338 aa6.61□□□□□ -1.35
LINC00458-201ENST00000423442 CCL14Q16627 93 aa6.61□□□□□ -1.35
LINC00458-201ENST00000423442 EMC4Q5J8M3 183 aa6.61□□□□□ -1.35
LINC00458-201ENST00000423442 SPDYAQ5MJ70 313 aa6.61□□□□□ -1.35
LINC00458-201ENST00000423442 SLFN13Q68D06 897 aa6.61□□□□□ -1.35
LINC00458-201ENST00000423442 DENND5AQ6IQ26 1287 aa6.61□□□□□ -1.35
LINC00458-201ENST00000423442 ZNF227Q86WZ6 799 aa6.61□□□□□ -1.35
LINC00458-201ENST00000423442 PPIL6Q8IXY8 311 aa6.61□□□□□ -1.35
LINC00458-201ENST00000423442 SMC5Q8IY18 1101 aa6.61□□□□□ -1.35
LINC00458-201ENST00000423442 KLHL36Q8N4N3 616 aa6.61□□□□□ -1.35
LINC00458-201ENST00000423442 MB21D1Q8N884 522 aa6.61□□□□□ -1.35
LINC00458-201ENST00000423442 OTUD7AQ8TE49 926 aaPredicted RBP6.61□□□□□ -1.35
LINC00458-201ENST00000423442 C12orf42Q96LP6 360 aa6.61□□□□□ -1.35
LINC00458-201ENST00000423442 TMEM209Q96SK2 561 aa6.61□□□□□ -1.35
LINC00458-201ENST00000423442 MEGF9Q9H1U4 602 aa6.61□□□□□ -1.35
LINC00458-201ENST00000423442 TOMM22Q9NS69 142 aa6.61□□□□□ -1.35
LINC00458-201ENST00000423442 DIAPH3Q9NSV4 1193 aa6.61□□□□□ -1.35
LINC00458-201ENST00000423442 CLDND1Q9NY35 253 aa6.61□□□□□ -1.35
LINC00458-201ENST00000423442 MORF4L1Q9UBU8 362 aa6.61□□□□□ -1.35
LINC00458-201ENST00000423442 CLIP2Q9UDT6 1046 aa6.61□□□□□ -1.35
LINC00458-201ENST00000423442 ISY1Q9ULR0 285 aaKnown RBP6.61□□□□□ -1.35
LINC00458-201ENST00000423442 LOC285556D6RIA3 1793 aa6.61□□□□□ -1.35
LINC00458-201ENST00000423442 ZNFX1Q9P2E3 1918 aaKnown RBP6.6□□□□□ -1.35
LINC00458-201ENST00000423442 H7BY64 318 aa6.6□□□□□ -1.35
LINC00458-201ENST00000423442 ZNF623O75123 536 aa6.6□□□□□ -1.35
LINC00458-201ENST00000423442 CYP7B1O75881 506 aa6.6□□□□□ -1.35
LINC00458-201ENST00000423442 SCG5P05408 212 aa6.6□□□□□ -1.35
LINC00458-201ENST00000423442 AKR1B1P15121 316 aa6.6□□□□□ -1.35
LINC00458-201ENST00000423442 VCAM1P19320 739 aa6.6□□□□□ -1.35
LINC00458-201ENST00000423442 RGS2P41220 211 aa6.6□□□□□ -1.35
LINC00458-201ENST00000423442 KCNJ6P48051 423 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms