RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 RFWD2Q8NHY2 731 aa17.68■□□□□ 0.42
NPC1L1-203ENST00000423141 DTX3LQ8TDB6 740 aa17.68■□□□□ 0.42
NPC1L1-203ENST00000423141 FBXO41Q8TF61 875 aa17.68■□□□□ 0.42
NPC1L1-203ENST00000423141 SMC6Q96SB8 1091 aa17.68■□□□□ 0.42
NPC1L1-203ENST00000423141 TUFT1Q9NNX1 390 aa17.68■□□□□ 0.42
NPC1L1-203ENST00000423141 STOML1Q9UBI4 398 aa17.68■□□□□ 0.42
NPC1L1-203ENST00000423141 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.68■□□□□ 0.42
NPC1L1-203ENST00000423141 GRIN3BO60391 1043 aa17.68■□□□□ 0.42
NPC1L1-203ENST00000423141 ATP9AO75110 1047 aa17.68■□□□□ 0.42
NPC1L1-203ENST00000423141 MAN1A1P33908 653 aa17.68■□□□□ 0.42
NPC1L1-203ENST00000423141 POLE2P56282 527 aa17.68■□□□□ 0.42
NPC1L1-203ENST00000423141 NFIAQ12857 509 aa17.68■□□□□ 0.42
NPC1L1-203ENST00000423141 KLF1Q13351 362 aaPredicted RBP17.68■□□□□ 0.42
NPC1L1-203ENST00000423141 GOLGB1Q14789 3259 aaKnown RBP17.68■□□□□ 0.42
NPC1L1-203ENST00000423141 MAPK6Q16659 721 aa17.68■□□□□ 0.42
NPC1L1-203ENST00000423141 ATRNL1Q5VV63 1379 aa17.68■□□□□ 0.42
NPC1L1-203ENST00000423141 MROH7Q68CQ1 1323 aa17.68■□□□□ 0.42
NPC1L1-203ENST00000423141 IRGCQ6NXR0 463 aa17.68■□□□□ 0.42
NPC1L1-203ENST00000423141 SHC3Q92529 594 aa17.68■□□□□ 0.42
NPC1L1-203ENST00000423141 ZNF75CPQ92670 426 aaPredicted RBP17.68■□□□□ 0.42
NPC1L1-203ENST00000423141 MAK16Q9BXY0 300 aaKnown RBP17.68■□□□□ 0.42
NPC1L1-203ENST00000423141 ARL8BQ9NVJ2 186 aa17.68■□□□□ 0.42
NPC1L1-203ENST00000423141 COL24A1Q17RW2 1714 aa17.67■□□□□ 0.42
NPC1L1-203ENST00000423141 ECE2O60344 883 aa17.67■□□□□ 0.42
NPC1L1-203ENST00000423141 PSMD10O75832 226 aa17.67■□□□□ 0.42
NPC1L1-203ENST00000423141 ZSCAN5DPP0CG00 497 aa17.67■□□□□ 0.42
NPC1L1-203ENST00000423141 FDX1P10109 184 aa17.67■□□□□ 0.42
NPC1L1-203ENST00000423141 ADSSP30520 456 aa17.67■□□□□ 0.42
NPC1L1-203ENST00000423141 GCLCP48506 637 aaPredicted RBP17.67■□□□□ 0.42
NPC1L1-203ENST00000423141 SLC45A4Q5BKX6 768 aa17.67■□□□□ 0.42
NPC1L1-203ENST00000423141 LVRNQ6Q4G3 990 aa17.67■□□□□ 0.42
NPC1L1-203ENST00000423141 ZC3H18Q86VM9 953 aaKnown RBP17.67■□□□□ 0.42
NPC1L1-203ENST00000423141 DDX1Q92499 740 aaKnown RBP17.67■□□□□ 0.42
NPC1L1-203ENST00000423141 KIFAP3Q92845 792 aa17.67■□□□□ 0.42
NPC1L1-203ENST00000423141 POLLQ9UGP5 575 aa17.67■□□□□ 0.42
NPC1L1-203ENST00000423141 GGA1Q9UJY5 639 aa17.67■□□□□ 0.42
NPC1L1-203ENST00000423141 PLS3P13797 630 aa17.67■□□□□ 0.42
NPC1L1-203ENST00000423141 GJC1P36383 396 aa17.67■□□□□ 0.42
NPC1L1-203ENST00000423141 SCNN1DP51172 638 aa17.67■□□□□ 0.42
NPC1L1-203ENST00000423141 CERKLQ49MI3 558 aaPredicted RBP17.67■□□□□ 0.42
NPC1L1-203ENST00000423141 HHATQ5VTY9 493 aa17.67■□□□□ 0.42
NPC1L1-203ENST00000423141 ACAD10Q6JQN1 1059 aa17.67■□□□□ 0.42
NPC1L1-203ENST00000423141 GSTA5Q7RTV2 222 aa17.67■□□□□ 0.42
NPC1L1-203ENST00000423141 RELL1Q8IUW5 271 aa17.67■□□□□ 0.42
NPC1L1-203ENST00000423141 ZCCHC9Q8N567 271 aaKnown RBP17.67■□□□□ 0.42
NPC1L1-203ENST00000423141 FHDC1Q9C0D6 1143 aaPredicted RBP17.67■□□□□ 0.42
NPC1L1-203ENST00000423141 KCNQ5Q9NR82 932 aa17.67■□□□□ 0.42
NPC1L1-203ENST00000423141 LNPEPQ9UIQ6 1025 aa17.67■□□□□ 0.42
NPC1L1-203ENST00000423141 LRCH1Q9Y2L9 728 aa17.67■□□□□ 0.42
NPC1L1-203ENST00000423141 CNTNAP4Q9C0A0 1308 aa17.66■□□□□ 0.42
NPC1L1-203ENST00000423141 CFAP69A5D8W1 941 aa17.66■□□□□ 0.42
NPC1L1-203ENST00000423141 F5H6K3 240 aa17.66■□□□□ 0.42
NPC1L1-203ENST00000423141 C6orf229H3BNL8 230 aa17.66■□□□□ 0.42
NPC1L1-203ENST00000423141 C2CD2LO14523 706 aa17.66■□□□□ 0.42
NPC1L1-203ENST00000423141 CAPN9O14815 690 aa17.66■□□□□ 0.42
NPC1L1-203ENST00000423141 TYROBPO43914 113 aa17.66■□□□□ 0.42
NPC1L1-203ENST00000423141 TBX10O75333 385 aa17.66■□□□□ 0.42
NPC1L1-203ENST00000423141 FOSP01100 380 aaPredicted RBP17.66■□□□□ 0.42
NPC1L1-203ENST00000423141 ADRB2P07550 413 aa17.66■□□□□ 0.42
NPC1L1-203ENST00000423141 ABHD2P08910 425 aa17.66■□□□□ 0.42
NPC1L1-203ENST00000423141 KLRC2P26717 231 aa17.66■□□□□ 0.42
NPC1L1-203ENST00000423141 MTHFD1LQ6UB35 978 aa17.66■□□□□ 0.42
NPC1L1-203ENST00000423141 RIBC1Q8N443 379 aaPredicted RBP17.66■□□□□ 0.42
NPC1L1-203ENST00000423141 CCDC89Q8N998 374 aa17.66■□□□□ 0.42
NPC1L1-203ENST00000423141 SH3TC2Q8TF17 1288 aa17.66■□□□□ 0.42
NPC1L1-203ENST00000423141 WDR60Q8WVS4 1066 aa17.66■□□□□ 0.42
NPC1L1-203ENST00000423141 HSPBP1Q9NZL4 362 aa17.66■□□□□ 0.42
NPC1L1-203ENST00000423141 ZNF335Q9H4Z2 1342 aaPredicted RBP17.66■□□□□ 0.42
NPC1L1-203ENST00000423141 BANF1O75531 89 aa17.66■□□□□ 0.42
NPC1L1-203ENST00000423141 CYP3A4P08684 503 aa17.66■□□□□ 0.42
NPC1L1-203ENST00000423141 ETS1P14921 441 aa17.66■□□□□ 0.42
NPC1L1-203ENST00000423141 ADRA1DP25100 572 aa17.66■□□□□ 0.42
NPC1L1-203ENST00000423141 SIAH1Q8IUQ4 282 aa17.66■□□□□ 0.42
NPC1L1-203ENST00000423141 CCNJLQ8IV13 435 aa17.66■□□□□ 0.42
NPC1L1-203ENST00000423141 FAM84AQ96KN4 292 aa17.66■□□□□ 0.42
NPC1L1-203ENST00000423141 CFAP57Q96MR6 1250 aa17.66■□□□□ 0.42
NPC1L1-203ENST00000423141 SH2D3AQ9BRG2 576 aa17.66■□□□□ 0.42
NPC1L1-203ENST00000423141 VCXQ9H320 206 aa17.66■□□□□ 0.42
NPC1L1-203ENST00000423141 VPS37BQ9H9H4 285 aa17.66■□□□□ 0.42
NPC1L1-203ENST00000423141 SCOCQ9UIL1 159 aa17.66■□□□□ 0.42
NPC1L1-203ENST00000423141 LMNAP02545 664 aaKnown RBP17.65■□□□□ 0.42
NPC1L1-203ENST00000423141 KCNA3P22001 575 aa17.65■□□□□ 0.42
NPC1L1-203ENST00000423141 DCAF4Q8WV16 495 aa17.65■□□□□ 0.42
NPC1L1-203ENST00000423141 CPA5Q8WXQ8 436 aa17.65■□□□□ 0.42
NPC1L1-203ENST00000423141 CCDC127Q96BQ5 260 aa17.65■□□□□ 0.42
NPC1L1-203ENST00000423141 ALG13Q9NP73 1137 aaKnown RBP17.65■□□□□ 0.42
NPC1L1-203ENST00000423141 KLHL11Q9NVR0 708 aa17.65■□□□□ 0.42
NPC1L1-203ENST00000423141 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.65■□□□□ 0.42
NPC1L1-203ENST00000423141 SMG5Q9UPR3 1016 aaKnown RBP17.65■□□□□ 0.42
NPC1L1-203ENST00000423141 A0A0G2JND7 137 aa17.65■□□□□ 0.42
NPC1L1-203ENST00000423141 P4HA2O15460 535 aa17.65■□□□□ 0.42
NPC1L1-203ENST00000423141 LGR5O75473 907 aa17.65■□□□□ 0.42
NPC1L1-203ENST00000423141 KRT4P19013 534 aa17.65■□□□□ 0.42
NPC1L1-203ENST00000423141 CD58P19256 250 aa17.65■□□□□ 0.42
NPC1L1-203ENST00000423141 LRRC74BQ6ZQY2 392 aa17.65■□□□□ 0.42
NPC1L1-203ENST00000423141 KBTBD2Q8IY47 623 aa17.65■□□□□ 0.42
NPC1L1-203ENST00000423141 CERS5Q8N5B7 392 aa17.65■□□□□ 0.42
NPC1L1-203ENST00000423141 HELQQ8TDG4 1101 aa17.65■□□□□ 0.42
NPC1L1-203ENST00000423141 ARHGEF1Q92888 912 aaKnown RBP17.65■□□□□ 0.42
NPC1L1-203ENST00000423141 NACC1Q96RE7 527 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms