RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 APOBEC3GQ9HC16 384 aaKnown RBP9.65□□□□□ -0.86
SNX20-203ENST00000423026 COG5Q9UP83 839 aa9.65□□□□□ -0.86
SNX20-203ENST00000423026 FAN1Q9Y2M0 1017 aa9.65□□□□□ -0.86
SNX20-203ENST00000423026 FAM170AA1A519 330 aa9.65□□□□□ -0.86
SNX20-203ENST00000423026 CCDC188H7C350 402 aa9.65□□□□□ -0.86
SNX20-203ENST00000423026 DYNC1LI2O43237 492 aaPredicted RBP9.65□□□□□ -0.86
SNX20-203ENST00000423026 B4GALT5O43286 388 aa9.65□□□□□ -0.86
SNX20-203ENST00000423026 B4GALT4O60513 344 aa9.65□□□□□ -0.86
SNX20-203ENST00000423026 ASS1P00966 412 aaKnown RBP9.65□□□□□ -0.86
SNX20-203ENST00000423026 CYP1A2P05177 515 aa9.65□□□□□ -0.86
SNX20-203ENST00000423026 MYBL1P10243 752 aa9.65□□□□□ -0.86
SNX20-203ENST00000423026 MCF2P10911 925 aa9.65□□□□□ -0.86
SNX20-203ENST00000423026 HOXD8P13378 290 aaPredicted RBP9.65□□□□□ -0.86
SNX20-203ENST00000423026 GNA15P30679 374 aa9.65□□□□□ -0.86
SNX20-203ENST00000423026 GSCP56915 257 aaPredicted RBP9.65□□□□□ -0.86
SNX20-203ENST00000423026 OSTNP61366 133 aa9.65□□□□□ -0.86
SNX20-203ENST00000423026 POU5F1Q01860 360 aaKnown RBP9.65□□□□□ -0.86
SNX20-203ENST00000423026 MESDQ14696 234 aa9.65□□□□□ -0.86
SNX20-203ENST00000423026 GRIK4Q16099 956 aa9.65□□□□□ -0.86
SNX20-203ENST00000423026 DNAJC21Q5F1R6 531 aaKnown RBP9.65□□□□□ -0.86
SNX20-203ENST00000423026 SMYD5Q6GMV2 418 aa9.65□□□□□ -0.86
SNX20-203ENST00000423026 CHADLQ6NUI6 762 aa9.65□□□□□ -0.86
SNX20-203ENST00000423026 LRRC31Q6UY01 552 aa9.65□□□□□ -0.86
SNX20-203ENST00000423026 IFT20Q8IY31 132 aa9.65□□□□□ -0.86
SNX20-203ENST00000423026 LINC01465Q8N7H1 131 aa9.65□□□□□ -0.86
SNX20-203ENST00000423026 RPS6KC1Q96S38 1066 aa9.65□□□□□ -0.86
SNX20-203ENST00000423026 MTMR12Q9C0I1 747 aa9.65□□□□□ -0.86
SNX20-203ENST00000423026 CDT1Q9H211 546 aa9.65□□□□□ -0.86
SNX20-203ENST00000423026 CARD9Q9H257 536 aa9.65□□□□□ -0.86
SNX20-203ENST00000423026 MINDY3Q9H8M7 445 aa9.65□□□□□ -0.86
SNX20-203ENST00000423026 STIM2Q9P246 746 aa9.65□□□□□ -0.86
SNX20-203ENST00000423026 NUB1Q9Y5A7 615 aa9.65□□□□□ -0.86
SNX20-203ENST00000423026 ALG6Q9Y672 507 aa9.65□□□□□ -0.86
SNX20-203ENST00000423026 ZNF236Q9UL36 1845 aa9.65□□□□□ -0.86
SNX20-203ENST00000423026 ZSWIM8A7E2V4 1837 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 DOCK3Q8IZD9 2030 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 TMEM110-MUSTN1A8MSY1 372 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 ZMYND10O75800 440 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 ERLIN2O94905 339 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 ITGBL1O95965 494 aaPredicted RBP9.64□□□□□ -0.87
SNX20-203ENST00000423026 CST3P01034 146 aaPredicted RBP9.64□□□□□ -0.87
SNX20-203ENST00000423026 VTNP04004 478 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 ACO1P21399 889 aaKnown RBP9.64□□□□□ -0.87
SNX20-203ENST00000423026 NSFP46459 744 aaKnown RBP9.64□□□□□ -0.87
SNX20-203ENST00000423026 INHBEP58166 350 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 YWHAEP62258 255 aaKnown RBP9.64□□□□□ -0.87
SNX20-203ENST00000423026 CDC42EP1Q00587 391 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 SLC7A5Q01650 507 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 MORN1Q5T089 497 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 EEF1DP3Q658K8 133 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 TADA2BQ86TJ2 420 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 RPAINQ86UA6 219 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 RASAL3Q86YV0 1011 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 RASGEF1CQ8N431 466 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 RBBP8NLQ8NC74 664 aaPredicted RBP9.64□□□□□ -0.87
SNX20-203ENST00000423026 ZNF564Q8TBZ8 553 aaPredicted RBP9.64□□□□□ -0.87
SNX20-203ENST00000423026 KRT12Q99456 494 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 NUP85Q9BW27 656 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 CXorf56Q9H5V9 222 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 NMRK2Q9NPI5 230 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 CNOT8Q9UFF9 292 aaKnown RBP9.64□□□□□ -0.87
SNX20-203ENST00000423026 NOC2LQ9Y3T9 749 aaKnown RBP9.64□□□□□ -0.87
SNX20-203ENST00000423026 KRIT1O00522 736 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 THAP12O43422 761 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 HOXC6P09630 235 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 UNGP13051 313 aaPredicted RBP9.64□□□□□ -0.87
SNX20-203ENST00000423026 AARSP49588 968 aaKnown RBP eCLIP9.64□□□□□ -0.87
SNX20-203ENST00000423026 MYL6P60660 151 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 CASP8Q14790 479 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 ZNF699Q32M78 642 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 LIN9Q5TKA1 542 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 RGMBQ6NW40 437 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 APBB1IPQ7Z5R6 666 aaPredicted RBP9.64□□□□□ -0.87
SNX20-203ENST00000423026 ZNF410Q86VK4 478 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 CDR2LQ86X02 465 aaPredicted RBP9.64□□□□□ -0.87
SNX20-203ENST00000423026 CEP120Q8N960 986 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 PPP1R16BQ96T49 567 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 ADPGKQ9BRR6 497 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 NIF3L1Q9GZT8 377 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 WNT8AQ9H1J5 351 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 DMGDHQ9UI17 866 aaKnown RBP9.64□□□□□ -0.87
SNX20-203ENST00000423026 TMEM59LQ9UK28 342 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 TTC7AQ9ULT0 858 aaPredicted RBP9.64□□□□□ -0.87
SNX20-203ENST00000423026 CNTN6Q9UQ52 1028 aa9.64□□□□□ -0.87
SNX20-203ENST00000423026 IGF2BP3O00425 579 aaKnown RBP eCLIP9.63□□□□□ -0.87
SNX20-203ENST00000423026 DDX3YO15523 660 aaKnown RBP9.63□□□□□ -0.87
SNX20-203ENST00000423026 ATMINO43313 823 aaPredicted RBP9.63□□□□□ -0.87
SNX20-203ENST00000423026 SPOPO43791 374 aa9.63□□□□□ -0.87
SNX20-203ENST00000423026 ECM2O94769 699 aaPredicted RBP9.63□□□□□ -0.87
SNX20-203ENST00000423026 CYP1A1P04798 512 aaPredicted RBP9.63□□□□□ -0.87
SNX20-203ENST00000423026 IQCF3P0C7M6 154 aa9.63□□□□□ -0.87
SNX20-203ENST00000423026 STAG3L1P0CL83 205 aa9.63□□□□□ -0.87
SNX20-203ENST00000423026 PPP2R5EQ16537 467 aa9.63□□□□□ -0.87
SNX20-203ENST00000423026 FOXR1Q6PIV2 292 aa9.63□□□□□ -0.87
SNX20-203ENST00000423026 KLHL7Q8IXQ5 586 aa9.63□□□□□ -0.87
SNX20-203ENST00000423026 MCOLN2Q8IZK6 566 aa9.63□□□□□ -0.87
SNX20-203ENST00000423026 HDAC7Q8WUI4 952 aa9.63□□□□□ -0.87
SNX20-203ENST00000423026 CPA5Q8WXQ8 436 aa9.63□□□□□ -0.87
SNX20-203ENST00000423026 AVENQ9NQS1 362 aaPredicted RBP9.63□□□□□ -0.87
SNX20-203ENST00000423026 ANK1P16157 1881 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms