RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 POP1Q99575 1024 aaKnown RBP17.03■□□□□ 0.32
BRAT1-202ENST00000421712 MTMR12Q9C0I1 747 aa17.03■□□□□ 0.32
BRAT1-202ENST00000421712 CHST7Q9NS84 486 aa17.03■□□□□ 0.32
BRAT1-202ENST00000421712 INTS13Q9NVM9 706 aa17.03■□□□□ 0.32
BRAT1-202ENST00000421712 ATG2AQ2TAZ0 1938 aa17.02■□□□□ 0.32
BRAT1-202ENST00000421712 FSD2A1L4K1 749 aa17.02■□□□□ 0.32
BRAT1-202ENST00000421712 PPEF2O14830 753 aa17.02■□□□□ 0.32
BRAT1-202ENST00000421712 CETN3O15182 167 aa17.02■□□□□ 0.32
BRAT1-202ENST00000421712 CLASP2O75122 1294 aaKnown RBP17.02■□□□□ 0.32
BRAT1-202ENST00000421712 EFEMP2O95967 443 aa17.02■□□□□ 0.32
BRAT1-202ENST00000421712 MBD3O95983 291 aa17.02■□□□□ 0.32
BRAT1-202ENST00000421712 ITGB3P05106 788 aa17.02■□□□□ 0.32
BRAT1-202ENST00000421712 CNPP09543 421 aaKnown RBP17.02■□□□□ 0.32
BRAT1-202ENST00000421712 SRGAP2BP0DMP2 458 aa17.02■□□□□ 0.32
BRAT1-202ENST00000421712 TKTP29401 623 aaKnown RBP17.02■□□□□ 0.32
BRAT1-202ENST00000421712 NFIL3Q16649 462 aa17.02■□□□□ 0.32
BRAT1-202ENST00000421712 EDRF1Q3B7T1 1238 aa17.02■□□□□ 0.32
BRAT1-202ENST00000421712 RTP2Q5QGT7 225 aa17.02■□□□□ 0.32
BRAT1-202ENST00000421712 ANKRD40Q6AI12 368 aa17.02■□□□□ 0.32
BRAT1-202ENST00000421712 CENPPQ6IPU0 288 aa17.02■□□□□ 0.32
BRAT1-202ENST00000421712 PRSS55Q6UWB4 352 aaPredicted RBP17.02■□□□□ 0.32
BRAT1-202ENST00000421712 WDR49Q8IV35 697 aa17.02■□□□□ 0.32
BRAT1-202ENST00000421712 GLYCTKQ8IVS8 523 aa17.02■□□□□ 0.32
BRAT1-202ENST00000421712 EFHBQ8N7U6 833 aa17.02■□□□□ 0.32
BRAT1-202ENST00000421712 PABPC5Q96DU9 382 aaKnown RBP17.02■□□□□ 0.32
BRAT1-202ENST00000421712 EEF2KMTQ96G04 330 aa17.02■□□□□ 0.32
BRAT1-202ENST00000421712 FAM84AQ96KN4 292 aa17.02■□□□□ 0.32
BRAT1-202ENST00000421712 MFSD14AQ96MC6 490 aa17.02■□□□□ 0.32
BRAT1-202ENST00000421712 KLHL5Q96PQ7 755 aa17.02■□□□□ 0.32
BRAT1-202ENST00000421712 CGRRF1Q99675 332 aa17.02■□□□□ 0.32
BRAT1-202ENST00000421712 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.02■□□□□ 0.32
BRAT1-202ENST00000421712 COG5Q9UP83 839 aa17.02■□□□□ 0.32
BRAT1-202ENST00000421712 AGAP1Q9UPQ3 857 aa17.02■□□□□ 0.32
BRAT1-202ENST00000421712 CTNND2Q9UQB3 1225 aa17.02■□□□□ 0.32
BRAT1-202ENST00000421712 IRAK3Q9Y616 596 aa17.02■□□□□ 0.32
BRAT1-202ENST00000421712 ANO9A1A5B4 782 aa17.01■□□□□ 0.31
BRAT1-202ENST00000421712 SPDYE4A6NLX3 237 aa17.01■□□□□ 0.31
BRAT1-202ENST00000421712 PIRO00625 290 aa17.01■□□□□ 0.31
BRAT1-202ENST00000421712 LINC01565O15544 149 aa17.01■□□□□ 0.31
BRAT1-202ENST00000421712 PHACTR2O75167 634 aa17.01■□□□□ 0.31
BRAT1-202ENST00000421712 CLSTN1O94985 981 aa17.01■□□□□ 0.31
BRAT1-202ENST00000421712 ADH1AP07327 375 aa17.01■□□□□ 0.31
BRAT1-202ENST00000421712 KRT13P13646 458 aa17.01■□□□□ 0.31
BRAT1-202ENST00000421712 CD44P16070 742 aaKnown RBP17.01■□□□□ 0.31
BRAT1-202ENST00000421712 RPL17P18621 184 aaKnown RBP17.01■□□□□ 0.31
BRAT1-202ENST00000421712 BMP6P22004 513 aa17.01■□□□□ 0.31
BRAT1-202ENST00000421712 KCNA5P22460 613 aa17.01■□□□□ 0.31
BRAT1-202ENST00000421712 CCNE1P24864 410 aa17.01■□□□□ 0.31
BRAT1-202ENST00000421712 POLR2BP30876 1174 aaKnown RBP17.01■□□□□ 0.31
BRAT1-202ENST00000421712 PSMC2P35998 433 aaKnown RBP17.01■□□□□ 0.31
BRAT1-202ENST00000421712 LILRA4P59901 499 aa17.01■□□□□ 0.31
BRAT1-202ENST00000421712 RBP5P82980 135 aa17.01■□□□□ 0.31
BRAT1-202ENST00000421712 CREMQ03060 361 aa17.01■□□□□ 0.31
BRAT1-202ENST00000421712 PSMD5Q16401 504 aa17.01■□□□□ 0.31
BRAT1-202ENST00000421712 PDXDC1Q6P996 788 aa17.01■□□□□ 0.31
BRAT1-202ENST00000421712 USP37Q86T82 979 aa17.01■□□□□ 0.31
BRAT1-202ENST00000421712 PPFIBP1Q86W92 1011 aa17.01■□□□□ 0.31
BRAT1-202ENST00000421712 FAM186BQ8IYM0 893 aa17.01■□□□□ 0.31
BRAT1-202ENST00000421712 C1orf127Q8N9H9 656 aa17.01■□□□□ 0.31
BRAT1-202ENST00000421712 APPL2Q8NEU8 664 aa17.01■□□□□ 0.31
BRAT1-202ENST00000421712 OR5B17Q8NGF7 314 aa17.01■□□□□ 0.31
BRAT1-202ENST00000421712 TMEM174Q8WUU8 243 aa17.01■□□□□ 0.31
BRAT1-202ENST00000421712 NELFBQ8WX92 580 aa17.01■□□□□ 0.31
BRAT1-202ENST00000421712 SUSD3Q96L08 255 aa17.01■□□□□ 0.31
BRAT1-202ENST00000421712 ZNF560Q96MR9 790 aa17.01■□□□□ 0.31
BRAT1-202ENST00000421712 THEGQ9P2T0 379 aa17.01■□□□□ 0.31
BRAT1-202ENST00000421712 ITGA11Q9UKX5 1188 aa17.01■□□□□ 0.31
BRAT1-202ENST00000421712 COL6A3P12111 3177 aa17.01■□□□□ 0.31
BRAT1-202ENST00000421712 EYSQ5T1H1 3165 aa17■□□□□ 0.31
BRAT1-202ENST00000421712 BICDL2A1A5D9 508 aa17■□□□□ 0.31
BRAT1-202ENST00000421712 TRIM49BA6NDI0 452 aa17■□□□□ 0.31
BRAT1-202ENST00000421712 PPP1R3GB7ZBB8 358 aa17■□□□□ 0.31
BRAT1-202ENST00000421712 SYN3O14994 580 aa17■□□□□ 0.31
BRAT1-202ENST00000421712 TEX28O15482 410 aa17■□□□□ 0.31
BRAT1-202ENST00000421712 LILRB3O75022 631 aa17■□□□□ 0.31
BRAT1-202ENST00000421712 AKAP3O75969 853 aa17■□□□□ 0.31
BRAT1-202ENST00000421712 EPB41P11171 864 aaKnown RBP17■□□□□ 0.31
BRAT1-202ENST00000421712 FGFR3P22607 806 aa17■□□□□ 0.31
BRAT1-202ENST00000421712 TAF6P49848 677 aa17■□□□□ 0.31
BRAT1-202ENST00000421712 PMS1P54277 932 aaKnown RBP17■□□□□ 0.31
BRAT1-202ENST00000421712 FKBP3Q00688 224 aaKnown RBP17■□□□□ 0.31
BRAT1-202ENST00000421712 LRRC63Q05C16 580 aa17■□□□□ 0.31
BRAT1-202ENST00000421712 BFSP1Q12934 665 aa17■□□□□ 0.31
BRAT1-202ENST00000421712 ADAM15Q13444 863 aa17■□□□□ 0.31
BRAT1-202ENST00000421712 SV2CQ496J9 727 aa17■□□□□ 0.31
BRAT1-202ENST00000421712 ZCWPW2Q504Y3 356 aa17■□□□□ 0.31
BRAT1-202ENST00000421712 ANKS3Q6ZW76 656 aa17■□□□□ 0.31
BRAT1-202ENST00000421712 PALB2Q86YC2 1186 aa17■□□□□ 0.31
BRAT1-202ENST00000421712 UBE2ZQ9H832 354 aaPredicted RBP17■□□□□ 0.31
BRAT1-202ENST00000421712 PCDHB8Q9UN66 801 aa17■□□□□ 0.31
BRAT1-202ENST00000421712 TIMM13Q9Y5L4 95 aaPredicted RBP17■□□□□ 0.31
BRAT1-202ENST00000421712 PTPRJQ12913 1337 aa16.99■□□□□ 0.31
BRAT1-202ENST00000421712 ARHGEF37A1IGU5 675 aa16.99■□□□□ 0.31
BRAT1-202ENST00000421712 H7C4K7 107 aa16.99■□□□□ 0.31
BRAT1-202ENST00000421712 CYB561D2O14569 222 aa16.99■□□□□ 0.31
BRAT1-202ENST00000421712 PAX3P23760 479 aa16.99■□□□□ 0.31
BRAT1-202ENST00000421712 PNPLA4P41247 253 aa16.99■□□□□ 0.31
BRAT1-202ENST00000421712 VAMP7P51809 220 aa16.99■□□□□ 0.31
BRAT1-202ENST00000421712 STX17P56962 302 aa16.99■□□□□ 0.31
BRAT1-202ENST00000421712 RBM10P98175 930 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms