RNA–Protein interactions for RNA: ENST00000421689.6

CAST-208, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-208ENST00000421689 P4HA2O15460 535 aa12.71□□□□□ -0.37
CAST-208ENST00000421689 CST3P01034 146 aaPredicted RBP12.71□□□□□ -0.37
CAST-208ENST00000421689 LINC00271P0C7V0 271 aa12.71□□□□□ -0.37
CAST-208ENST00000421689 PAX3P23760 479 aa12.71□□□□□ -0.37
CAST-208ENST00000421689 PPM1AP35813 382 aa12.71□□□□□ -0.37
CAST-208ENST00000421689 BMPR1AP36894 532 aa12.71□□□□□ -0.37
CAST-208ENST00000421689 PNPLA4P41247 253 aa12.71□□□□□ -0.37
CAST-208ENST00000421689 COPB1P53618 953 aaKnown RBP12.71□□□□□ -0.37
CAST-208ENST00000421689 MYL7Q01449 175 aa12.71□□□□□ -0.37
CAST-208ENST00000421689 TAP1Q03518 808 aa12.71□□□□□ -0.37
CAST-208ENST00000421689 CETN1Q12798 172 aa12.71□□□□□ -0.37
CAST-208ENST00000421689 NCOA4Q13772 614 aa12.71□□□□□ -0.37
CAST-208ENST00000421689 CBWD6Q4V339 395 aa12.71□□□□□ -0.37
CAST-208ENST00000421689 CBWD3Q5JTY5 395 aa12.71□□□□□ -0.37
CAST-208ENST00000421689 MIIPQ5JXC2 388 aa12.71□□□□□ -0.37
CAST-208ENST00000421689 CBWD5Q5RIA9 395 aa12.71□□□□□ -0.37
CAST-208ENST00000421689 GAS2L3Q86XJ1 694 aa12.71□□□□□ -0.37
CAST-208ENST00000421689 TMEM130Q8N3G9 435 aa12.71□□□□□ -0.37
CAST-208ENST00000421689 FBXL13Q8NEE6 735 aa12.71□□□□□ -0.37
CAST-208ENST00000421689 CXorf38Q8TB03 319 aa12.71□□□□□ -0.37
CAST-208ENST00000421689 ZNF560Q96MR9 790 aa12.71□□□□□ -0.37
CAST-208ENST00000421689 TGS1Q96RS0 853 aaKnown RBP12.71□□□□□ -0.37
CAST-208ENST00000421689 PLVAPQ9BX97 442 aa12.71□□□□□ -0.37
CAST-208ENST00000421689 RBSNQ9H1K0 784 aa12.71□□□□□ -0.37
CAST-208ENST00000421689 VPS16Q9H269 839 aa12.71□□□□□ -0.37
CAST-208ENST00000421689 NDST4Q9H3R1 872 aa12.71□□□□□ -0.37
CAST-208ENST00000421689 SLC28A3Q9HAS3 691 aa12.71□□□□□ -0.37
CAST-208ENST00000421689 TAB2Q9NYJ8 693 aa12.71□□□□□ -0.37
CAST-208ENST00000421689 SPG21Q9NZD8 308 aa12.71□□□□□ -0.37
CAST-208ENST00000421689 CACNG4Q9UBN1 327 aa12.71□□□□□ -0.37
CAST-208ENST00000421689 SIX4Q9UIU6 781 aa12.71□□□□□ -0.37
CAST-208ENST00000421689 PRG3Q9Y2Y8 225 aaPredicted RBP12.71□□□□□ -0.37
CAST-208ENST00000421689 COQ4Q9Y3A0 265 aa12.71□□□□□ -0.37
CAST-208ENST00000421689 NT5C1B-RDH14C9J2C7 533 aa12.7□□□□□ -0.38
CAST-208ENST00000421689 PES1O00541 588 aaKnown RBP12.7□□□□□ -0.38
CAST-208ENST00000421689 TADA2AO75478 443 aa12.7□□□□□ -0.38
CAST-208ENST00000421689 B3GAT3O94766 335 aa12.7□□□□□ -0.38
CAST-208ENST00000421689 KIF4AO95239 1232 aa12.7□□□□□ -0.38
CAST-208ENST00000421689 VNN1O95497 513 aa12.7□□□□□ -0.38
CAST-208ENST00000421689 HLA-DRAP01903 254 aa12.7□□□□□ -0.38
CAST-208ENST00000421689 RB1P06400 928 aa12.7□□□□□ -0.38
CAST-208ENST00000421689 DNAJB2P25686 324 aa12.7□□□□□ -0.38
CAST-208ENST00000421689 ATICP31939 592 aa12.7□□□□□ -0.38
CAST-208ENST00000421689 PBX3P40426 434 aa12.7□□□□□ -0.38
CAST-208ENST00000421689 PIK3CAP42336 1068 aa12.7□□□□□ -0.38
CAST-208ENST00000421689 TAF6P49848 677 aa12.7□□□□□ -0.38
CAST-208ENST00000421689 ERVK-21P61565 698 aa12.7□□□□□ -0.38
CAST-208ENST00000421689 MYO1EQ12965 1108 aa12.7□□□□□ -0.38
CAST-208ENST00000421689 SGSM1Q2NKQ1 1148 aa12.7□□□□□ -0.38
CAST-208ENST00000421689 SV2CQ496J9 727 aa12.7□□□□□ -0.38
CAST-208ENST00000421689 PPP2R2DQ66LE6 453 aa12.7□□□□□ -0.38
CAST-208ENST00000421689 SLC39A11Q8N1S5 342 aa12.7□□□□□ -0.38
CAST-208ENST00000421689 LRRC52Q8N7C0 313 aa12.7□□□□□ -0.38
CAST-208ENST00000421689 CCDC150Q8NCX0 1101 aa12.7□□□□□ -0.38
CAST-208ENST00000421689 TAS1R2Q8TE23 839 aa12.7□□□□□ -0.38
CAST-208ENST00000421689 RABGGTAQ92696 567 aa12.7□□□□□ -0.38
CAST-208ENST00000421689 TIFAQ96CG3 184 aa12.7□□□□□ -0.38
CAST-208ENST00000421689 IGSF21Q96ID5 467 aa12.7□□□□□ -0.38
CAST-208ENST00000421689 HPDLQ96IR7 371 aa12.7□□□□□ -0.38
CAST-208ENST00000421689 MARCH5Q9NX47 278 aa12.7□□□□□ -0.38
CAST-208ENST00000421689 RAB20Q9NX57 234 aa12.7□□□□□ -0.38
CAST-208ENST00000421689 ADAM28Q9UKQ2 775 aa12.7□□□□□ -0.38
CAST-208ENST00000421689 NUB1Q9Y5A7 615 aa12.7□□□□□ -0.38
CAST-208ENST00000421689 SCN1AP35498 2009 aa12.7□□□□□ -0.38
CAST-208ENST00000421689 GTPBP10A4D1E9 387 aaKnown RBP12.69□□□□□ -0.38
CAST-208ENST00000421689 C5orf67F2Z3F1 127 aa12.69□□□□□ -0.38
CAST-208ENST00000421689 PPEF2O14830 753 aa12.69□□□□□ -0.38
CAST-208ENST00000421689 TRAPPC3O43617 180 aa12.69□□□□□ -0.38
CAST-208ENST00000421689 ARHGEF15O94989 841 aa12.69□□□□□ -0.38
CAST-208ENST00000421689 STAU1O95793 577 aaKnown RBP12.69□□□□□ -0.38
CAST-208ENST00000421689 SERPINC1P01008 464 aa12.69□□□□□ -0.38
CAST-208ENST00000421689 CTNNB1P35222 781 aa12.69□□□□□ -0.38
CAST-208ENST00000421689 LILRA4P59901 499 aa12.69□□□□□ -0.38
CAST-208ENST00000421689 MYL6P60660 151 aa12.69□□□□□ -0.38
CAST-208ENST00000421689 PLCB3Q01970 1234 aa12.69□□□□□ -0.38
CAST-208ENST00000421689 KRT17Q04695 432 aa12.69□□□□□ -0.38
CAST-208ENST00000421689 ELAVL2Q12926 359 aaKnown RBP12.69□□□□□ -0.38
CAST-208ENST00000421689 FILIP1LQ4L180 1135 aa12.69□□□□□ -0.38
CAST-208ENST00000421689 EPC2Q52LR7 807 aa12.69□□□□□ -0.38
CAST-208ENST00000421689 SCARA3Q6AZY7 606 aa12.69□□□□□ -0.38
CAST-208ENST00000421689 CD300LGQ6UXG3 332 aa12.69□□□□□ -0.38
CAST-208ENST00000421689 APTXQ7Z2E3 356 aaKnown RBP12.69□□□□□ -0.38
CAST-208ENST00000421689 EHBP1Q8NDI1 1231 aa12.69□□□□□ -0.38
CAST-208ENST00000421689 C3orf58Q8NDZ4 430 aa12.69□□□□□ -0.38
CAST-208ENST00000421689 TAF4BQ92750 862 aa12.69□□□□□ -0.38
CAST-208ENST00000421689 TMEM169Q96HH4 297 aa12.69□□□□□ -0.38
CAST-208ENST00000421689 C17orf80Q9BSJ5 609 aa12.69□□□□□ -0.38
CAST-208ENST00000421689 IMPG2Q9BZV3 1241 aa12.69□□□□□ -0.38
CAST-208ENST00000421689 PLXNA4Q9HCM2 1894 aa12.68□□□□□ -0.38
CAST-208ENST00000421689 KPNA7A9QM74 516 aa12.68□□□□□ -0.38
CAST-208ENST00000421689 F8W810 466 aa12.68□□□□□ -0.38
CAST-208ENST00000421689 FGF18O76093 207 aa12.68□□□□□ -0.38
CAST-208ENST00000421689 CLSTN1O94985 981 aa12.68□□□□□ -0.38
CAST-208ENST00000421689 ASS1P00966 412 aaKnown RBP12.68□□□□□ -0.38
CAST-208ENST00000421689 ITGB1P05556 798 aa12.68□□□□□ -0.38
CAST-208ENST00000421689 IGFBP6P24592 240 aaPredicted RBP12.68□□□□□ -0.38
CAST-208ENST00000421689 FANCCQ00597 558 aa12.68□□□□□ -0.38
CAST-208ENST00000421689 ZNF699Q32M78 642 aa12.68□□□□□ -0.38
CAST-208ENST00000421689 FKBP15Q5T1M5 1219 aa12.68□□□□□ -0.38
CAST-208ENST00000421689 DSTYKQ6XUX3 929 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms