RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 FAM71BQ8TC56 605 aa9.4□□□□□ -0.91
SNCA-206ENST00000420646 ZNF606Q8WXB4 792 aa9.4□□□□□ -0.91
SNCA-206ENST00000420646 TFAP2BQ92481 460 aa9.4□□□□□ -0.91
SNCA-206ENST00000420646 CD101Q93033 1021 aa9.4□□□□□ -0.91
SNCA-206ENST00000420646 VIPAS39Q9H9C1 493 aa9.4□□□□□ -0.91
SNCA-206ENST00000420646 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.4□□□□□ -0.91
SNCA-206ENST00000420646 CPSF3Q9UKF6 684 aaKnown RBP9.4□□□□□ -0.91
SNCA-206ENST00000420646 GTF3C4Q9UKN8 822 aa9.4□□□□□ -0.91
SNCA-206ENST00000420646 PIK3R2O00459 728 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 OGTO15294 1046 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 CELF2O95319 508 aaKnown RBP9.39□□□□□ -0.91
SNCA-206ENST00000420646 LDHAP00338 332 aaKnown RBP9.39□□□□□ -0.91
SNCA-206ENST00000420646 CAPN2P17655 700 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 TMOD1P28289 359 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 PSMC4P43686 418 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 DR1Q01658 176 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 MBTD1Q05BQ5 628 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 MXD4Q14582 209 aaPredicted RBP9.39□□□□□ -0.91
SNCA-206ENST00000420646 TRIP13Q15645 432 aaPredicted RBP9.39□□□□□ -0.91
SNCA-206ENST00000420646 ZNF792Q3KQV3 632 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 TTMPQ5BVD1 217 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 CYP4A22Q5TCH4 519 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 FOXR1Q6PIV2 292 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 PRUNE1Q86TP1 453 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 FMNL3Q8IVF7 1028 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 UHMK1Q8TAS1 419 aaKnown RBP9.39□□□□□ -0.91
SNCA-206ENST00000420646 MAGOHBQ96A72 148 aaKnown RBP9.39□□□□□ -0.91
SNCA-206ENST00000420646 SCLT1Q96NL6 688 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 CDT1Q9H211 546 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 RRAGCQ9HB90 399 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 ERAP1Q9NZ08 941 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 ADAM22Q9P0K1 906 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 CPA4Q9UI42 421 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 IVNS1ABPQ9Y6Y0 642 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 A0A0G2JMZ2 1700 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 CES2O00748 559 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 RARAP10276 462 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 SMPD1P17405 629 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 ATP1A2P50993 1020 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 EFNA5P52803 228 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 PLTPP55058 493 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 UAP1Q16222 522 aaPredicted RBP9.39□□□□□ -0.91
SNCA-206ENST00000420646 WDR72Q3MJ13 1102 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 CDCA2Q69YH5 1023 aaPredicted RBP9.39□□□□□ -0.91
SNCA-206ENST00000420646 ZPBP2Q6X784 338 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 UBL4BQ8N7F7 174 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 C1orf131Q8NDD1 294 aaKnown RBP9.39□□□□□ -0.91
SNCA-206ENST00000420646 FAM167AQ96KS9 214 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 FAM49AQ9H0Q0 323 aaPredicted RBP9.39□□□□□ -0.91
SNCA-206ENST00000420646 CISHQ9NSE2 258 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 HMGXB4Q9UGU5 601 aa9.39□□□□□ -0.91
SNCA-206ENST00000420646 PI4K2BG5E9Z4 385 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 ACKR2O00590 384 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 ASS1P00966 412 aaKnown RBP9.38□□□□□ -0.91
SNCA-206ENST00000420646 TMEM191BP0C7N4 346 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 TAS2R40P59535 323 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 NOMO3P69849 1222 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 TRPC3Q13507 836 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 DUOXA2Q1HG44 320 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 KIZQ2M2Z5 673 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 CFAP58Q5T655 872 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 C11orf63Q6NUN7 778 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 MAATS1Q7Z4T9 603 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 GPR142Q7Z601 462 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 IQCKQ8N0W5 287 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 ABRAQ8N0Z2 381 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 NPLOC4Q8TAT6 608 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 CALR3Q96L12 384 aaKnown RBP9.38□□□□□ -0.91
SNCA-206ENST00000420646 MPHOSPH6Q99547 160 aaKnown RBP9.38□□□□□ -0.91
SNCA-206ENST00000420646 C16orf70Q9BSU1 422 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 FZD8Q9H461 694 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 PTPRHQ9HD43 1115 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 MED4Q9NPJ6 270 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 SETD4Q9NVD3 440 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 HES2Q9Y543 173 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 LOC285556D6RIA3 1793 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 GOLGA6CA6NDK9 693 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 H3BRB1 525 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 MYO1FO00160 1098 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 HBP1O60381 514 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 GOLGA6DP0CG33 693 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 HSD17B3P37058 310 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 PTENP60484 403 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 MCL1Q07820 350 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 MPZL3Q6UWV2 235 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 MON1BQ7L1V2 547 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 NLRP7Q8WX94 980 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 CAVIN3Q969G5 261 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 ACBD3Q9H3P7 528 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 TUT1Q9H6E5 874 aaKnown RBP9.38□□□□□ -0.91
SNCA-206ENST00000420646 CDHR5Q9HBB8 845 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 GOLGA6AQ9NYA3 693 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 PLAAQ9Y263 795 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 ATP8A1Q9Y2Q0 1164 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 DOCK3Q8IZD9 2030 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 ASB14A6NK59 587 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 LACTBL1A8MY62 500 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 HSF2BPO75031 334 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 ZC3H11AO75152 810 aaKnown RBP eCLIP9.38□□□□□ -0.91
SNCA-206ENST00000420646 CYP1A1P04798 512 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms