RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 PLEKHO2Q8TD55 490 aa22.31■■□□□ 1.16
HMGXB4-203ENST00000420166 NELFBQ8WX92 580 aa22.31■■□□□ 1.16
HMGXB4-203ENST00000420166 ANKRD36BP1Q96IX9 119 aa22.31■■□□□ 1.16
HMGXB4-203ENST00000420166 B3GALT6Q96L58 329 aa22.31■■□□□ 1.16
HMGXB4-203ENST00000420166 MRPL17Q9NRX2 175 aaKnown RBP22.31■■□□□ 1.16
HMGXB4-203ENST00000420166 CTNND2Q9UQB3 1225 aa22.31■■□□□ 1.16
HMGXB4-203ENST00000420166 I3L4J1 428 aa22.3■■□□□ 1.16
HMGXB4-203ENST00000420166 PIRO00625 290 aa22.3■■□□□ 1.16
HMGXB4-203ENST00000420166 CETN3O15182 167 aa22.3■■□□□ 1.16
HMGXB4-203ENST00000420166 LILRB3O75022 631 aa22.3■■□□□ 1.16
HMGXB4-203ENST00000420166 TNNC2P02585 160 aa22.3■■□□□ 1.16
HMGXB4-203ENST00000420166 DUOXA2Q1HG44 320 aa22.3■■□□□ 1.16
HMGXB4-203ENST00000420166 KIAA0319Q5VV43 1072 aa22.3■■□□□ 1.16
HMGXB4-203ENST00000420166 TTI2Q6NXR4 508 aa22.3■■□□□ 1.16
HMGXB4-203ENST00000420166 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.3■■□□□ 1.16
HMGXB4-203ENST00000420166 RBM43Q6ZSC3 357 aaKnown RBP22.3■■□□□ 1.16
HMGXB4-203ENST00000420166 GPR65Q8IYL9 337 aa22.3■■□□□ 1.16
HMGXB4-203ENST00000420166 FAM186BQ8IYM0 893 aa22.3■■□□□ 1.16
HMGXB4-203ENST00000420166 TMC2Q8TDI7 906 aa22.3■■□□□ 1.16
HMGXB4-203ENST00000420166 PARD3BQ8TEW8 1205 aa22.3■■□□□ 1.16
HMGXB4-203ENST00000420166 SUSD3Q96L08 255 aa22.3■■□□□ 1.16
HMGXB4-203ENST00000420166 POP1Q99575 1024 aaKnown RBP22.3■■□□□ 1.16
HMGXB4-203ENST00000420166 TTPALQ9BTX7 342 aa22.3■■□□□ 1.16
HMGXB4-203ENST00000420166 MKNK1Q9BUB5 465 aa22.3■■□□□ 1.16
HMGXB4-203ENST00000420166 TLE6Q9H808 572 aa22.3■■□□□ 1.16
HMGXB4-203ENST00000420166 ITGA11Q9UKX5 1188 aa22.3■■□□□ 1.16
HMGXB4-203ENST00000420166 SSX2IPQ9Y2D8 614 aa22.3■■□□□ 1.16
HMGXB4-203ENST00000420166 BICDL2A1A5D9 508 aa22.29■■□□□ 1.16
HMGXB4-203ENST00000420166 C2CD2LO14523 706 aa22.29■■□□□ 1.16
HMGXB4-203ENST00000420166 TNNI1P19237 187 aa22.29■■□□□ 1.16
HMGXB4-203ENST00000420166 FGFR3P22607 806 aa22.29■■□□□ 1.16
HMGXB4-203ENST00000420166 PSMC2P35998 433 aaKnown RBP22.29■■□□□ 1.16
HMGXB4-203ENST00000420166 NRIP1P48552 1158 aa22.29■■□□□ 1.16
HMGXB4-203ENST00000420166 AARSP49588 968 aaKnown RBP eCLIP22.29■■□□□ 1.16
HMGXB4-203ENST00000420166 FKBP3Q00688 224 aaKnown RBP22.29■■□□□ 1.16
HMGXB4-203ENST00000420166 PAK1Q13153 545 aa22.29■■□□□ 1.16
HMGXB4-203ENST00000420166 DUSP6Q16828 381 aa22.29■■□□□ 1.16
HMGXB4-203ENST00000420166 RTP2Q5QGT7 225 aa22.29■■□□□ 1.16
HMGXB4-203ENST00000420166 CCDC183Q5T5S1 534 aa22.29■■□□□ 1.16
HMGXB4-203ENST00000420166 FOXR2Q6PJQ5 311 aa22.29■■□□□ 1.16
HMGXB4-203ENST00000420166 RBM23Q86U06 439 aaKnown RBP22.29■■□□□ 1.16
HMGXB4-203ENST00000420166 CEP57Q86XR8 500 aa22.29■■□□□ 1.16
HMGXB4-203ENST00000420166 MLKLQ8NB16 471 aa22.29■■□□□ 1.16
HMGXB4-203ENST00000420166 CXorf38Q8TB03 319 aa22.29■■□□□ 1.16
HMGXB4-203ENST00000420166 RIN2Q8WYP3 895 aaPredicted RBP22.29■■□□□ 1.16
HMGXB4-203ENST00000420166 EEF2KMTQ96G04 330 aa22.29■■□□□ 1.16
HMGXB4-203ENST00000420166 CDCA3Q99618 268 aaPredicted RBP22.29■■□□□ 1.16
HMGXB4-203ENST00000420166 SIX4Q9UIU6 781 aa22.29■■□□□ 1.16
HMGXB4-203ENST00000420166 ITGB3P05106 788 aa22.28■■□□□ 1.16
HMGXB4-203ENST00000420166 PAX3P23760 479 aa22.28■■□□□ 1.16
HMGXB4-203ENST00000420166 TKTP29401 623 aaKnown RBP22.28■■□□□ 1.16
HMGXB4-203ENST00000420166 POLR2BP30876 1174 aaKnown RBP22.28■■□□□ 1.16
HMGXB4-203ENST00000420166 GTF2F1P35269 517 aaKnown RBP eCLIP22.28■■□□□ 1.16
HMGXB4-203ENST00000420166 LILRA4P59901 499 aa22.28■■□□□ 1.16
HMGXB4-203ENST00000420166 CLDN10P78369 228 aa22.28■■□□□ 1.16
HMGXB4-203ENST00000420166 PIK3R5Q8WYR1 880 aa22.28■■□□□ 1.16
HMGXB4-203ENST00000420166 DUSP9Q99956 384 aaKnown RBP22.28■■□□□ 1.16
HMGXB4-203ENST00000420166 AGAP1Q9UPQ3 857 aa22.28■■□□□ 1.16
HMGXB4-203ENST00000420166 LRRIQ3A6PVS8 624 aaPredicted RBP22.27■■□□□ 1.16
HMGXB4-203ENST00000420166 SYN3O14994 580 aa22.27■■□□□ 1.16
HMGXB4-203ENST00000420166 PER2O15055 1255 aa22.27■■□□□ 1.16
HMGXB4-203ENST00000420166 SLC16A3O15427 465 aaKnown RBP22.27■■□□□ 1.16
HMGXB4-203ENST00000420166 EPB41P11171 864 aaKnown RBP22.27■■□□□ 1.16
HMGXB4-203ENST00000420166 KRT13P13646 458 aa22.27■■□□□ 1.16
HMGXB4-203ENST00000420166 TAF6P49848 677 aa22.27■■□□□ 1.16
HMGXB4-203ENST00000420166 NLRP12P59046 1061 aa22.27■■□□□ 1.16
HMGXB4-203ENST00000420166 COL19A1Q14993 1142 aa22.27■■□□□ 1.16
HMGXB4-203ENST00000420166 SKIV2LQ15477 1246 aaKnown RBP22.27■■□□□ 1.16
HMGXB4-203ENST00000420166 INTS8Q75QN2 995 aaKnown RBP22.27■■□□□ 1.16
HMGXB4-203ENST00000420166 CSGALNACT2Q8N6G5 542 aa22.27■■□□□ 1.16
HMGXB4-203ENST00000420166 ZNF516Q92618 1163 aa22.27■■□□□ 1.16
HMGXB4-203ENST00000420166 ZNF560Q96MR9 790 aa22.27■■□□□ 1.16
HMGXB4-203ENST00000420166 EMILIN2Q9BXX0 1053 aa22.27■■□□□ 1.16
HMGXB4-203ENST00000420166 IGFLR1Q9H665 355 aa22.27■■□□□ 1.16
HMGXB4-203ENST00000420166 RXFP1Q9HBX9 757 aa22.27■■□□□ 1.16
HMGXB4-203ENST00000420166 PCDHB8Q9UN66 801 aa22.27■■□□□ 1.16
HMGXB4-203ENST00000420166 COL6A3P12111 3177 aa22.27■■□□□ 1.16
HMGXB4-203ENST00000420166 M0QZQ0 153 aa22.26■■□□□ 1.15
HMGXB4-203ENST00000420166 SPTLC1O15269 473 aa22.26■■□□□ 1.15
HMGXB4-203ENST00000420166 NCK2O43639 380 aa22.26■■□□□ 1.15
HMGXB4-203ENST00000420166 KRT19P08727 400 aa22.26■■□□□ 1.15
HMGXB4-203ENST00000420166 CNPP09543 421 aaKnown RBP22.26■■□□□ 1.15
HMGXB4-203ENST00000420166 PTMSP20962 102 aa22.26■■□□□ 1.15
HMGXB4-203ENST00000420166 PNPLA4P41247 253 aa22.26■■□□□ 1.15
HMGXB4-203ENST00000420166 VAMP7P51809 220 aa22.26■■□□□ 1.15
HMGXB4-203ENST00000420166 STX17P56962 302 aa22.26■■□□□ 1.15
HMGXB4-203ENST00000420166 DLG4P78352 724 aa22.26■■□□□ 1.15
HMGXB4-203ENST00000420166 RBP5P82980 135 aa22.26■■□□□ 1.15
HMGXB4-203ENST00000420166 ENPEPQ07075 957 aa22.26■■□□□ 1.15
HMGXB4-203ENST00000420166 DPCR1Q3MIW9 517 aa22.26■■□□□ 1.15
HMGXB4-203ENST00000420166 SCARA3Q6AZY7 606 aa22.26■■□□□ 1.15
HMGXB4-203ENST00000420166 PDXDC1Q6P996 788 aa22.26■■□□□ 1.15
HMGXB4-203ENST00000420166 PRSS55Q6UWB4 352 aaPredicted RBP22.26■■□□□ 1.15
HMGXB4-203ENST00000420166 TRAPPC11Q7Z392 1133 aa22.26■■□□□ 1.15
HMGXB4-203ENST00000420166 USP37Q86T82 979 aa22.26■■□□□ 1.15
HMGXB4-203ENST00000420166 LRRC52Q8N7C0 313 aa22.26■■□□□ 1.15
HMGXB4-203ENST00000420166 EFHBQ8N7U6 833 aa22.26■■□□□ 1.15
HMGXB4-203ENST00000420166 CEP63Q96MT8 703 aa22.26■■□□□ 1.15
HMGXB4-203ENST00000420166 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.26■■□□□ 1.15
HMGXB4-203ENST00000420166 TMEM63CQ9P1W3 806 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms