RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 SEPT11Q9NVA2 429 aaKnown RBP22.48■■□□□ 1.19
GPC1-202ENST00000420138 GRID2IPA4D2P6 1211 aa22.47■■□□□ 1.19
GPC1-202ENST00000420138 PALMO75781 387 aa22.47■■□□□ 1.19
GPC1-202ENST00000420138 AXLP30530 894 aa22.47■■□□□ 1.19
GPC1-202ENST00000420138 TRPC3Q13507 836 aa22.47■■□□□ 1.19
GPC1-202ENST00000420138 ALS2CR12Q96Q35 445 aa22.47■■□□□ 1.19
GPC1-202ENST00000420138 CELF4Q9BZC1 486 aaKnown RBP22.47■■□□□ 1.19
GPC1-202ENST00000420138 ZNF132P52740 706 aa22.47■■□□□ 1.19
GPC1-202ENST00000420138 UBXN11Q5T124 520 aa22.47■■□□□ 1.19
GPC1-202ENST00000420138 SERINC5Q86VE9 423 aa22.47■■□□□ 1.19
GPC1-202ENST00000420138 NIF3L1Q9GZT8 377 aa22.47■■□□□ 1.19
GPC1-202ENST00000420138 SNTG2Q9NY99 539 aa22.47■■□□□ 1.19
GPC1-202ENST00000420138 C2CD2Q9Y426 696 aa22.47■■□□□ 1.19
GPC1-202ENST00000420138 PCDHB2Q9Y5E7 798 aa22.47■■□□□ 1.19
GPC1-202ENST00000420138 FAM170AA1A519 330 aa22.46■■□□□ 1.19
GPC1-202ENST00000420138 ANKRD62A6NC57 917 aa22.46■■□□□ 1.19
GPC1-202ENST00000420138 GZMAP12544 262 aa22.46■■□□□ 1.19
GPC1-202ENST00000420138 ASPAP45381 313 aa22.46■■□□□ 1.19
GPC1-202ENST00000420138 RNF180Q86T96 592 aa22.46■■□□□ 1.19
GPC1-202ENST00000420138 DNAJC5GQ8N7S2 189 aa22.46■■□□□ 1.19
GPC1-202ENST00000420138 PCSK9Q8NBP7 692 aaKnown RBP22.46■■□□□ 1.19
GPC1-202ENST00000420138 SH3TC2Q8TF17 1288 aa22.46■■□□□ 1.19
GPC1-202ENST00000420138 ARHGEF26Q96DR7 871 aa22.46■■□□□ 1.19
GPC1-202ENST00000420138 TLR10Q9BXR5 811 aa22.46■■□□□ 1.19
GPC1-202ENST00000420138 THAP2Q9H0W7 228 aa22.46■■□□□ 1.19
GPC1-202ENST00000420138 PTPN22Q9Y2R2 807 aa22.46■■□□□ 1.19
GPC1-202ENST00000420138 HES2Q9Y543 173 aa22.46■■□□□ 1.19
GPC1-202ENST00000420138 PCDHB4Q9Y5E5 795 aa22.46■■□□□ 1.19
GPC1-202ENST00000420138 SAR1BQ9Y6B6 198 aa22.46■■□□□ 1.19
GPC1-202ENST00000420138 NCANO14594 1321 aa22.46■■□□□ 1.19
GPC1-202ENST00000420138 SRGAP2O75044 1071 aa22.45■■□□□ 1.19
GPC1-202ENST00000420138 FTLP02792 175 aaPredicted RBP22.45■■□□□ 1.19
GPC1-202ENST00000420138 NAP1L1P55209 391 aaKnown RBP22.45■■□□□ 1.19
GPC1-202ENST00000420138 MRPS6P82932 125 aaKnown RBP22.45■■□□□ 1.19
GPC1-202ENST00000420138 ZNF699Q32M78 642 aa22.45■■□□□ 1.19
GPC1-202ENST00000420138 TMEM270Q6UE05 265 aa22.45■■□□□ 1.19
GPC1-202ENST00000420138 FAM228AQ86W67 206 aa22.45■■□□□ 1.19
GPC1-202ENST00000420138 LRRC57Q8N9N7 239 aa22.45■■□□□ 1.19
GPC1-202ENST00000420138 PIN4Q9Y237 131 aaKnown RBP22.45■■□□□ 1.19
GPC1-202ENST00000420138 RTN2O75298 545 aa22.45■■□□□ 1.18
GPC1-202ENST00000420138 ITGB3P05106 788 aa22.45■■□□□ 1.18
GPC1-202ENST00000420138 ABCB4P21439 1286 aa22.45■■□□□ 1.18
GPC1-202ENST00000420138 TMEM132DQ14C87 1099 aa22.45■■□□□ 1.18
GPC1-202ENST00000420138 FAM47CQ5HY64 1035 aa22.45■■□□□ 1.18
GPC1-202ENST00000420138 FBXO38Q6PIJ6 1188 aa22.45■■□□□ 1.18
GPC1-202ENST00000420138 ALKAL1Q6UXT8 129 aa22.45■■□□□ 1.18
GPC1-202ENST00000420138 RPAINQ86UA6 219 aa22.45■■□□□ 1.18
GPC1-202ENST00000420138 CD302Q8IX05 232 aa22.45■■□□□ 1.18
GPC1-202ENST00000420138 RBBP8NLQ8NC74 664 aaPredicted RBP22.45■■□□□ 1.18
GPC1-202ENST00000420138 TPCN2Q8NHX9 752 aa22.45■■□□□ 1.18
GPC1-202ENST00000420138 TAF4BQ92750 862 aa22.45■■□□□ 1.18
GPC1-202ENST00000420138 SNX27Q96L92 541 aa22.45■■□□□ 1.18
GPC1-202ENST00000420138 ZMAT2Q96NC0 199 aaKnown RBP22.45■■□□□ 1.18
GPC1-202ENST00000420138 NXF3Q9H4D5 531 aaKnown RBP22.45■■□□□ 1.18
GPC1-202ENST00000420138 PLEKHA5Q9HAU0 1116 aa22.45■■□□□ 1.18
GPC1-202ENST00000420138 SNX12Q9UMY4 172 aa22.45■■□□□ 1.18
GPC1-202ENST00000420138 NOC2LQ9Y3T9 749 aaKnown RBP22.45■■□□□ 1.18
GPC1-202ENST00000420138 CDY2AQ9Y6F7 541 aa22.45■■□□□ 1.18
GPC1-202ENST00000420138 NCK2O43639 380 aa22.44■■□□□ 1.18
GPC1-202ENST00000420138 GUCY2FP51841 1108 aa22.44■■□□□ 1.18
GPC1-202ENST00000420138 BPIFB4P59827 614 aa22.44■■□□□ 1.18
GPC1-202ENST00000420138 ZNF677Q86XU0 584 aa22.44■■□□□ 1.18
GPC1-202ENST00000420138 NT5DC4Q86YG4 428 aa22.44■■□□□ 1.18
GPC1-202ENST00000420138 CEP112Q8N8E3 955 aa22.44■■□□□ 1.18
GPC1-202ENST00000420138 RFFLQ8WZ73 363 aa22.44■■□□□ 1.18
GPC1-202ENST00000420138 VRTNQ9H8Y1 702 aa22.44■■□□□ 1.18
GPC1-202ENST00000420138 OSGEPQ9NPF4 335 aa22.44■■□□□ 1.18
GPC1-202ENST00000420138 CHRNA1P02708 482 aa22.43■■□□□ 1.18
GPC1-202ENST00000420138 KRT19P08727 400 aa22.43■■□□□ 1.18
GPC1-202ENST00000420138 H2AFXP16104 143 aaPredicted RBP22.43■■□□□ 1.18
GPC1-202ENST00000420138 MGAT3Q09327 533 aa22.43■■□□□ 1.18
GPC1-202ENST00000420138 ZBTB6Q15916 424 aa22.43■■□□□ 1.18
GPC1-202ENST00000420138 WHAMMP3Q1A5X7 153 aa22.43■■□□□ 1.18
GPC1-202ENST00000420138 RSRC2Q7L4I2 434 aaKnown RBP22.43■■□□□ 1.18
GPC1-202ENST00000420138 APBB1IPQ7Z5R6 666 aaPredicted RBP22.43■■□□□ 1.18
GPC1-202ENST00000420138 SLC35G2Q8TBE7 412 aa22.43■■□□□ 1.18
GPC1-202ENST00000420138 CTNNBL1Q8WYA6 563 aaPredicted RBP22.43■■□□□ 1.18
GPC1-202ENST00000420138 CISHQ9NSE2 258 aa22.43■■□□□ 1.18
GPC1-202ENST00000420138 POLIQ9UNA4 740 aa22.43■■□□□ 1.18
GPC1-202ENST00000420138 TRPV2Q9Y5S1 764 aa22.43■■□□□ 1.18
GPC1-202ENST00000420138 BRCA2P51587 3418 aa22.43■■□□□ 1.18
GPC1-202ENST00000420138 CFHP08603 1231 aa22.43■■□□□ 1.18
GPC1-202ENST00000420138 UNGP13051 313 aaPredicted RBP22.43■■□□□ 1.18
GPC1-202ENST00000420138 PRLRP16471 622 aa22.43■■□□□ 1.18
GPC1-202ENST00000420138 TCEAL1Q15170 157 aa22.43■■□□□ 1.18
GPC1-202ENST00000420138 CLEC16AQ2KHT3 1053 aa22.43■■□□□ 1.18
GPC1-202ENST00000420138 MEI1Q5TIA1 1274 aa22.43■■□□□ 1.18
GPC1-202ENST00000420138 LHX8Q68G74 356 aa22.43■■□□□ 1.18
GPC1-202ENST00000420138 SLFN11Q7Z7L1 901 aa22.43■■□□□ 1.18
GPC1-202ENST00000420138 BCO2Q9BYV7 579 aa22.43■■□□□ 1.18
GPC1-202ENST00000420138 SENP6Q9GZR1 1112 aaPredicted RBP22.43■■□□□ 1.18
GPC1-202ENST00000420138 COG5Q9UP83 839 aa22.43■■□□□ 1.18
GPC1-202ENST00000420138 FTCDO95954 541 aa22.42■■□□□ 1.18
GPC1-202ENST00000420138 WEE2P0C1S8 567 aa22.42■■□□□ 1.18
GPC1-202ENST00000420138 NOP2P46087 812 aaKnown RBP22.42■■□□□ 1.18
GPC1-202ENST00000420138 SMYD5Q6GMV2 418 aa22.42■■□□□ 1.18
GPC1-202ENST00000420138 GOLGA1Q92805 767 aa22.42■■□□□ 1.18
GPC1-202ENST00000420138 KIF12Q96FN5 646 aa22.42■■□□□ 1.18
GPC1-202ENST00000420138 FAXDC2Q96IV6 333 aa22.42■■□□□ 1.18
GPC1-202ENST00000420138 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms