RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 IGFBP6P24592 240 aaPredicted RBP11.42□□□□□ -0.58
RFC1-203ENST00000418436 LRPAP1P30533 357 aa11.42□□□□□ -0.58
RFC1-203ENST00000418436 GTF2F1P35269 517 aaKnown RBP eCLIP11.42□□□□□ -0.58
RFC1-203ENST00000418436 LTBRP36941 435 aa11.42□□□□□ -0.58
RFC1-203ENST00000418436 NRIP1P48552 1158 aa11.42□□□□□ -0.58
RFC1-203ENST00000418436 DSG1Q02413 1049 aa11.42□□□□□ -0.58
RFC1-203ENST00000418436 SPAG1Q07617 926 aa11.42□□□□□ -0.58
RFC1-203ENST00000418436 BMS1Q14692 1282 aaKnown RBP11.42□□□□□ -0.58
RFC1-203ENST00000418436 SKIV2LQ15477 1246 aaKnown RBP11.42□□□□□ -0.58
RFC1-203ENST00000418436 PTPN14Q15678 1187 aa11.42□□□□□ -0.58
RFC1-203ENST00000418436 DUSP6Q16828 381 aa11.42□□□□□ -0.58
RFC1-203ENST00000418436 KNOP1Q1ED39 458 aaKnown RBP11.42□□□□□ -0.58
RFC1-203ENST00000418436 KIAA0319Q5VV43 1072 aa11.42□□□□□ -0.58
RFC1-203ENST00000418436 BLOC1S3Q6QNY0 202 aa11.42□□□□□ -0.58
RFC1-203ENST00000418436 C12orf56Q8IXR9 622 aa11.42□□□□□ -0.58
RFC1-203ENST00000418436 EFHBQ8N7U6 833 aa11.42□□□□□ -0.58
RFC1-203ENST00000418436 SPATA20Q8TB22 786 aa11.42□□□□□ -0.58
RFC1-203ENST00000418436 TMEM174Q8WUU8 243 aa11.42□□□□□ -0.58
RFC1-203ENST00000418436 ATXN2LQ8WWM7 1075 aaKnown RBP11.42□□□□□ -0.58
RFC1-203ENST00000418436 FBXL18Q96ME1 805 aa11.42□□□□□ -0.58
RFC1-203ENST00000418436 CDCA3Q99618 268 aaPredicted RBP11.42□□□□□ -0.58
RFC1-203ENST00000418436 TLE6Q9H808 572 aa11.42□□□□□ -0.58
RFC1-203ENST00000418436 AGPAT3Q9NRZ7 376 aa11.42□□□□□ -0.58
RFC1-203ENST00000418436 CGNQ9P2M7 1197 aaKnown RBP11.42□□□□□ -0.58
RFC1-203ENST00000418436 THEGQ9P2T0 379 aa11.42□□□□□ -0.58
RFC1-203ENST00000418436 TUBGCP4Q9UGJ1 667 aa11.42□□□□□ -0.58
RFC1-203ENST00000418436 UBQLN1Q9UMX0 589 aaKnown RBP11.42□□□□□ -0.58
RFC1-203ENST00000418436 DERAQ9Y315 318 aa11.42□□□□□ -0.58
RFC1-203ENST00000418436 SPTBN5Q9NRC6 3674 aaKnown RBP11.41□□□□□ -0.58
RFC1-203ENST00000418436 SF3B1O75533 1304 aaKnown RBP eCLIP11.41□□□□□ -0.58
RFC1-203ENST00000418436 FSD2A1L4K1 749 aa11.41□□□□□ -0.58
RFC1-203ENST00000418436 PODXLO00592 558 aa11.41□□□□□ -0.58
RFC1-203ENST00000418436 PER2O15055 1255 aa11.41□□□□□ -0.58
RFC1-203ENST00000418436 CLASP2O75122 1294 aaKnown RBP11.41□□□□□ -0.58
RFC1-203ENST00000418436 B3GAT3O94766 335 aa11.41□□□□□ -0.58
RFC1-203ENST00000418436 IL18RAPO95256 599 aa11.41□□□□□ -0.58
RFC1-203ENST00000418436 UBE2HP62256 183 aa11.41□□□□□ -0.58
RFC1-203ENST00000418436 ELAVL2Q12926 359 aaKnown RBP11.41□□□□□ -0.58
RFC1-203ENST00000418436 PNOCQ13519 176 aa11.41□□□□□ -0.58
RFC1-203ENST00000418436 USP41Q3LFD5 358 aa11.41□□□□□ -0.58
RFC1-203ENST00000418436 SPATA1Q5VX52 437 aa11.41□□□□□ -0.58
RFC1-203ENST00000418436 JADE1Q6IE81 842 aa11.41□□□□□ -0.58
RFC1-203ENST00000418436 ARMCX5Q6P1M9 558 aa11.41□□□□□ -0.58
RFC1-203ENST00000418436 TMEM184AQ6ZMB5 413 aa11.41□□□□□ -0.58
RFC1-203ENST00000418436 RBM23Q86U06 439 aaKnown RBP11.41□□□□□ -0.58
RFC1-203ENST00000418436 NT5DC4Q86YG4 428 aa11.41□□□□□ -0.58
RFC1-203ENST00000418436 BRSK2Q8IWQ3 736 aa11.41□□□□□ -0.58
RFC1-203ENST00000418436 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.41□□□□□ -0.58
RFC1-203ENST00000418436 NELFCDQ8IXH7 590 aa11.41□□□□□ -0.58
RFC1-203ENST00000418436 GPD1LQ8N335 351 aa11.41□□□□□ -0.58
RFC1-203ENST00000418436 C3orf58Q8NDZ4 430 aa11.41□□□□□ -0.58
RFC1-203ENST00000418436 AUTS2Q8WXX7 1259 aa11.41□□□□□ -0.58
RFC1-203ENST00000418436 CCDC47Q96A33 483 aaKnown RBP11.41□□□□□ -0.58
RFC1-203ENST00000418436 SAAL1Q96ER3 474 aa11.41□□□□□ -0.58
RFC1-203ENST00000418436 FAM213AQ9BRX8 229 aa11.41□□□□□ -0.58
RFC1-203ENST00000418436 KCTD10Q9H3F6 313 aa11.41□□□□□ -0.58
RFC1-203ENST00000418436 PCIF1Q9H4Z3 704 aa11.41□□□□□ -0.58
RFC1-203ENST00000418436 IGFLR1Q9H665 355 aa11.41□□□□□ -0.58
RFC1-203ENST00000418436 UBE2ZQ9H832 354 aaPredicted RBP11.41□□□□□ -0.58
RFC1-203ENST00000418436 RXFP1Q9HBX9 757 aa11.41□□□□□ -0.58
RFC1-203ENST00000418436 HSPBP1Q9NZL4 362 aa11.41□□□□□ -0.58
RFC1-203ENST00000418436 SSX2IPQ9Y2D8 614 aa11.41□□□□□ -0.58
RFC1-203ENST00000418436 C2CD2Q9Y426 696 aa11.41□□□□□ -0.58
RFC1-203ENST00000418436 XIRP2A4UGR9 3374 aa11.41□□□□□ -0.58
RFC1-203ENST00000418436 BRWD1Q9NSI6 2320 aa11.41□□□□□ -0.58
RFC1-203ENST00000418436 PLXNA3P51805 1871 aa11.4□□□□□ -0.58
RFC1-203ENST00000418436 UNC80Q8N2C7 3258 aa11.4□□□□□ -0.58
RFC1-203ENST00000418436 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.4□□□□□ -0.58
RFC1-203ENST00000418436 GOLGA8IPA6NC78 632 aa11.4□□□□□ -0.58
RFC1-203ENST00000418436 GOLGA8JA6NMD2 632 aa11.4□□□□□ -0.58
RFC1-203ENST00000418436 PDXKO00764 312 aa11.4□□□□□ -0.58
RFC1-203ENST00000418436 LINC01565O15544 149 aa11.4□□□□□ -0.58
RFC1-203ENST00000418436 XPOTO43592 962 aaKnown RBP11.4□□□□□ -0.58
RFC1-203ENST00000418436 PRPF40AO75400 957 aaKnown RBP11.4□□□□□ -0.58
RFC1-203ENST00000418436 GLP2RO95838 553 aa11.4□□□□□ -0.58
RFC1-203ENST00000418436 URODP06132 367 aa11.4□□□□□ -0.58
RFC1-203ENST00000418436 NFICP08651 508 aa11.4□□□□□ -0.58
RFC1-203ENST00000418436 FGFR3P22607 806 aa11.4□□□□□ -0.58
RFC1-203ENST00000418436 GLUD2P49448 558 aa11.4□□□□□ -0.58
RFC1-203ENST00000418436 WNT7BP56706 349 aa11.4□□□□□ -0.58
RFC1-203ENST00000418436 DLX2Q07687 328 aaPredicted RBP11.4□□□□□ -0.58
RFC1-203ENST00000418436 HS2ST1Q7LGA3 356 aa11.4□□□□□ -0.58
RFC1-203ENST00000418436 VN1R2Q8NFZ6 395 aa11.4□□□□□ -0.58
RFC1-203ENST00000418436 GOLGA5Q8TBA6 731 aa11.4□□□□□ -0.58
RFC1-203ENST00000418436 HASPINQ8TF76 798 aa11.4□□□□□ -0.58
RFC1-203ENST00000418436 B3GALT6Q96L58 329 aa11.4□□□□□ -0.58
RFC1-203ENST00000418436 KLHL5Q96PQ7 755 aa11.4□□□□□ -0.58
RFC1-203ENST00000418436 GSDMAQ96QA5 445 aa11.4□□□□□ -0.58
RFC1-203ENST00000418436 KIAA1586Q9HCI6 787 aa11.4□□□□□ -0.58
RFC1-203ENST00000418436 MRPL17Q9NRX2 175 aaKnown RBP11.4□□□□□ -0.58
RFC1-203ENST00000418436 CLDND1Q9NY35 253 aa11.4□□□□□ -0.58
RFC1-203ENST00000418436 HOOK1Q9UJC3 728 aaKnown RBP11.4□□□□□ -0.58
RFC1-203ENST00000418436 PCDHA5Q9Y5H7 936 aa11.4□□□□□ -0.58
RFC1-203ENST00000418436 MTCL1Q9Y4B5 1905 aaKnown RBP11.4□□□□□ -0.58
RFC1-203ENST00000418436 ANO9A1A5B4 782 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 ZNF233A6NK53 670 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 PIRO00625 290 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 CLIC2O15247 247 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 TRAPPC3O43617 180 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 KINO60870 393 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms