RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 NMD3Q96D46 503 aaKnown RBP8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 CFAP57Q96MR6 1250 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 PHACTR1Q9C0D0 580 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 EBF3Q9H4W6 596 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 VAT1LQ9HCJ6 419 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 PRDM11Q9NQV5 511 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 PICK1Q9NRD5 415 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 A0A0G2JND7 137 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 GSTTP1A0A1W2PQM5 241 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 HARSP12081 509 aaKnown RBP8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 RRM1P23921 792 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 MAGEA4P43358 317 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 TRMT5Q32P41 509 aaKnown RBP8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 CAVIN4Q5BKX8 364 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 USP17L2Q6R6M4 530 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 PTF1AQ7RTS3 328 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 PHLDB2Q86SQ0 1253 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 SATL1Q86VE3 508 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 LRRC43Q8N309 656 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 BBOF1Q8ND07 529 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 WDR66Q8TBY9 1149 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 ATG4AQ8WYN0 398 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 FAM161BQ96MY7 647 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 PLVAPQ9BX97 442 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 TRIM55Q9BYV6 548 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 TMOD3Q9NYL9 352 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 CDK5RAP2Q96SN8 1893 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 TMEM221A6NGB7 291 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 MARCH6O60337 910 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 TNNI2P48788 182 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 CDK16Q00536 496 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 UBE4AQ14139 1066 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 FAM91A1Q658Y4 838 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 OLFML2BQ68BL8 750 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 CYP4F22Q6NT55 531 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 RNF168Q8IYW5 571 aaPredicted RBP8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 ZNF276Q8N554 614 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 DGCR14Q96DF8 476 aaKnown RBP8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 PRR11Q96HE9 360 aaPredicted RBP8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 CLMNQ96JQ2 1002 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 INTS2Q9H0H0 1204 aaKnown RBP8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 FBXO6Q9NRD1 293 aaPredicted RBP8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 CLIC5Q9NZA1 410 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 CHORDC1Q9UHD1 332 aaPredicted RBP8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 SUGT1Q9Y2Z0 365 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 NEU2Q9Y3R4 380 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 FOXN3O00409 490 aaPredicted RBP8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 CLIC2O15247 247 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 BUD23O43709 281 aaKnown RBP8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 ACTR3P61158 418 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 OVGP1Q12889 678 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 ARHGAP44Q17R89 818 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 P3H1Q32P28 736 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 TBC1D9BQ66K14 1250 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 RIPOR1Q6ZS17 1223 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 FAM186BQ8IYM0 893 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 ZNF444Q8N0Y2 327 aaPredicted RBP8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 OR6Y1Q8NGX8 325 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 ZNF653Q96CK0 615 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 RBM15Q96T37 977 aaKnown RBP eCLIP8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 REEP2Q9BRK0 252 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 FOXP3Q9BZS1 431 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 SSU72Q9NP77 194 aaKnown RBP8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 ARHGEF4Q9NR80 690 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 MTO1Q9Y2Z2 717 aaKnown RBP8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 WTIPA6NIX2 430 aaPredicted RBP8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 LRRN2O75325 713 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 OR6B1O95007 311 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 RFC4P35249 363 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 PSMC2P35998 433 aaKnown RBP8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 IL6STP40189 918 aaPredicted RBP8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 CD151P48509 253 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 VPS41P49754 854 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 ARFIP2P53365 341 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 ZBTB16Q05516 673 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 MED21Q13503 144 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 LLGL1Q15334 1064 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 SUSD4Q5VX71 490 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 DUS1LQ6P1R4 473 aaKnown RBP8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 RFX8Q6ZV50 586 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 ANKS1BQ7Z6G8 1248 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 ADGRG6Q86SQ4 1221 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 LRRC6Q86X45 466 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 PDSS2Q86YH6 399 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 KSR1Q8IVT5 923 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 LARGE2Q8N3Y3 721 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 CCDC110Q8TBZ0 833 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 HAUS1Q96CS2 278 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 PANX3Q96QZ0 392 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 GPAMQ9HCL2 828 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 LRRC4BQ9NT99 713 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 SPATA31A5Q5VU36 1347 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 SPATA31A7Q8IWB4 1347 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 MYH11P35749 1972 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 POC1B-GALNT4F8VUJ3 575 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 ZNF862O60290 1169 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 RFX1P22670 979 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 CBX3Q13185 183 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 RASA2Q15283 850 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms