RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 KCNMA1Q12791 1236 aa14.23□□□□□ -0.13
HLA-DMB-258ENST00000418107 NFX1Q12986 1120 aaKnown RBP14.23□□□□□ -0.13
HLA-DMB-258ENST00000418107 PRPF4BQ13523 1007 aaKnown RBP14.23□□□□□ -0.13
HLA-DMB-258ENST00000418107 CBX2Q14781 532 aaPredicted RBP14.23□□□□□ -0.13
HLA-DMB-258ENST00000418107 SPOUT1Q5T280 376 aaKnown RBP14.23□□□□□ -0.13
HLA-DMB-258ENST00000418107 CYP26C1Q6V0L0 522 aa14.23□□□□□ -0.13
HLA-DMB-258ENST00000418107 ZPBP2Q6X784 338 aa14.23□□□□□ -0.13
HLA-DMB-258ENST00000418107 ZBTB33Q86T24 672 aa14.23□□□□□ -0.13
HLA-DMB-258ENST00000418107 TMTC1Q8IUR5 882 aa14.23□□□□□ -0.13
HLA-DMB-258ENST00000418107 SUGP1Q8IWZ8 645 aaKnown RBP14.23□□□□□ -0.13
HLA-DMB-258ENST00000418107 C17orf53Q8N3J3 647 aaPredicted RBP14.23□□□□□ -0.13
HLA-DMB-258ENST00000418107 KIAA1524Q8TCG1 905 aa14.23□□□□□ -0.13
HLA-DMB-258ENST00000418107 MICAL1Q8TDZ2 1067 aa14.23□□□□□ -0.13
HLA-DMB-258ENST00000418107 CCDC127Q96BQ5 260 aa14.23□□□□□ -0.13
HLA-DMB-258ENST00000418107 RPGRIP1Q96KN7 1286 aa14.23□□□□□ -0.13
HLA-DMB-258ENST00000418107 FDXACB1Q9BRP7 624 aaPredicted RBP14.23□□□□□ -0.13
HLA-DMB-258ENST00000418107 ABHD10Q9NUJ1 306 aa14.23□□□□□ -0.13
HLA-DMB-258ENST00000418107 PRMT7Q9NVM4 692 aaPredicted RBP14.23□□□□□ -0.13
HLA-DMB-258ENST00000418107 GCNT4Q9P109 453 aa14.23□□□□□ -0.13
HLA-DMB-258ENST00000418107 USP34Q70CQ2 3546 aa14.23□□□□□ -0.13
HLA-DMB-258ENST00000418107 PLXNA4Q9HCM2 1894 aa14.23□□□□□ -0.13
HLA-DMB-258ENST00000418107 ACKR2O00590 384 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 MGEA5O60502 916 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 POLR2FP61218 127 aaKnown RBP14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 POU5F1BQ06416 359 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 CYP24A1Q07973 514 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 RRAGAQ7L523 313 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 KIAA0319LQ8IZA0 1049 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 LINC01465Q8N7H1 131 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 VN1R2Q8NFZ6 395 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 FNBP1Q96RU3 617 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 ACO2Q99798 780 aaKnown RBP14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 PHF7Q9BWX1 381 aaPredicted RBP14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 EDEM3Q9BZQ6 932 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 CCDC113Q9H0I3 377 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 NLRC4Q9NPP4 1024 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 AGPAT5Q9NUQ2 364 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 CEP72Q9P209 647 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 HCSTQ9UBK5 93 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 GINS2Q9Y248 185 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 PCDHB7Q9Y5E2 793 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 SMIM35A0A1B0GVV1 85 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 GTPBP10A4D1E9 387 aaKnown RBP14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 TBKBP1A7MCY6 615 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 RNF225M0QZC1 329 aaPredicted RBP14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 CCP110O43303 1012 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 ZNF500O60304 480 aaPredicted RBP14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 TOM1L1O75674 476 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 DLATP10515 647 aaKnown RBP14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 SLC9A1P19634 815 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 GCLMP48507 274 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 ACOT2P49753 483 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 MBTD1Q05BQ5 628 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 TCF15Q12870 199 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 NOLC1Q14978 699 aaKnown RBP eCLIP14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 ATF7IP2Q5U623 682 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 ZNF410Q86VK4 478 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 FBXL6Q8N531 539 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 TMC2Q8TDI7 906 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 NFKBIZQ9BYH8 718 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 TTYH3Q9C0H2 523 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 NUCKS1Q9H1E3 243 aaKnown RBP14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 ERVK-5Q9HDB9 667 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 TLR9Q9NR96 1032 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 NOC2LQ9Y3T9 749 aaKnown RBP14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 PCDHB12Q9Y5F1 795 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 STYXL1Q9Y6J8 313 aa14.22□□□□□ -0.13
HLA-DMB-258ENST00000418107 A0A0B4J269 797 aa14.21□□□□□ -0.14
HLA-DMB-258ENST00000418107 CSDE1O75534 798 aaKnown RBP14.21□□□□□ -0.14
HLA-DMB-258ENST00000418107 FGF18O76093 207 aa14.21□□□□□ -0.14
HLA-DMB-258ENST00000418107 ERLIN2O94905 339 aa14.21□□□□□ -0.14
HLA-DMB-258ENST00000418107 PON1P27169 355 aa14.21□□□□□ -0.14
HLA-DMB-258ENST00000418107 MXI1P50539 228 aa14.21□□□□□ -0.14
HLA-DMB-258ENST00000418107 GPC3P51654 580 aa14.21□□□□□ -0.14
HLA-DMB-258ENST00000418107 ERVFC1P60507 584 aa14.21□□□□□ -0.14
HLA-DMB-258ENST00000418107 DLG4P78352 724 aa14.21□□□□□ -0.14
HLA-DMB-258ENST00000418107 UBE3AQ05086 875 aa14.21□□□□□ -0.14
HLA-DMB-258ENST00000418107 SIGLEC14Q08ET2 396 aa14.21□□□□□ -0.14
HLA-DMB-258ENST00000418107 NCBP1Q09161 790 aaKnown RBP14.21□□□□□ -0.14
HLA-DMB-258ENST00000418107 DUSP6Q16828 381 aa14.21□□□□□ -0.14
HLA-DMB-258ENST00000418107 KIZQ2M2Z5 673 aa14.21□□□□□ -0.14
HLA-DMB-258ENST00000418107 ZNF568Q3ZCX4 644 aa14.21□□□□□ -0.14
HLA-DMB-258ENST00000418107 DNTTIP2Q5QJE6 756 aaKnown RBP14.21□□□□□ -0.14
HLA-DMB-258ENST00000418107 SRGAP1Q7Z6B7 1085 aa14.21□□□□□ -0.14
HLA-DMB-258ENST00000418107 NME8Q8N427 588 aa14.21□□□□□ -0.14
HLA-DMB-258ENST00000418107 TMEM40Q8WWA1 233 aa14.21□□□□□ -0.14
HLA-DMB-258ENST00000418107 SUSD6Q92537 303 aa14.21□□□□□ -0.14
HLA-DMB-258ENST00000418107 SPAG5Q96R06 1193 aa14.21□□□□□ -0.14
HLA-DMB-258ENST00000418107 DNAJC7Q99615 494 aa14.21□□□□□ -0.14
HLA-DMB-258ENST00000418107 ADAM2Q99965 735 aa14.21□□□□□ -0.14
HLA-DMB-258ENST00000418107 GCOM2Q9BZD3 368 aaPredicted RBP14.21□□□□□ -0.14
HLA-DMB-258ENST00000418107 INTS2Q9H0H0 1204 aaKnown RBP14.21□□□□□ -0.14
HLA-DMB-258ENST00000418107 FZD8Q9H461 694 aa14.21□□□□□ -0.14
HLA-DMB-258ENST00000418107 CDHR5Q9HBB8 845 aa14.21□□□□□ -0.14
HLA-DMB-258ENST00000418107 PLCB1Q9NQ66 1216 aa14.21□□□□□ -0.14
HLA-DMB-258ENST00000418107 RRAGDQ9NQL2 400 aaPredicted RBP14.21□□□□□ -0.14
HLA-DMB-258ENST00000418107 AAASQ9NRG9 546 aa14.21□□□□□ -0.14
HLA-DMB-258ENST00000418107 TRMT1Q9NXH9 659 aaKnown RBP14.21□□□□□ -0.14
HLA-DMB-258ENST00000418107 CACNA1HO95180 2353 aa14.2□□□□□ -0.14
HLA-DMB-258ENST00000418107 SOWAHDA6NJG2 315 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms