RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 NOTCH4Q99466 2003 aa20.05■□□□□ 0.8
VPS16-204ENST00000417508 M0QZQ0 153 aa20.05■□□□□ 0.8
VPS16-204ENST00000417508 LRG1P02750 347 aa20.05■□□□□ 0.8
VPS16-204ENST00000417508 CFHP08603 1231 aa20.05■□□□□ 0.8
VPS16-204ENST00000417508 NTHL1P78549 312 aa20.05■□□□□ 0.8
VPS16-204ENST00000417508 POU5F1Q01860 360 aaKnown RBP20.05■□□□□ 0.8
VPS16-204ENST00000417508 CWF19L1Q69YN2 538 aaKnown RBP20.05■□□□□ 0.8
VPS16-204ENST00000417508 SLFN12LQ6IEE8 588 aa20.05■□□□□ 0.8
VPS16-204ENST00000417508 EPSTI1Q96J88 318 aa20.05■□□□□ 0.8
VPS16-204ENST00000417508 FIZ1Q96SL8 496 aa20.05■□□□□ 0.8
VPS16-204ENST00000417508 BACH2Q9BYV9 841 aa20.05■□□□□ 0.8
VPS16-204ENST00000417508 ZHX3Q9H4I2 956 aa20.05■□□□□ 0.8
VPS16-204ENST00000417508 GDE1Q9NZC3 331 aa20.05■□□□□ 0.8
VPS16-204ENST00000417508 NUMBLQ9Y6R0 609 aa20.05■□□□□ 0.8
VPS16-204ENST00000417508 WDR27A2RRH5 827 aa20.04■□□□□ 0.8
VPS16-204ENST00000417508 LACTBL1A8MY62 500 aa20.04■□□□□ 0.8
VPS16-204ENST00000417508 H0Y858 1186 aa20.04■□□□□ 0.8
VPS16-204ENST00000417508 PRRG1O14668 218 aa20.04■□□□□ 0.8
VPS16-204ENST00000417508 FAM189A1O60320 539 aa20.04■□□□□ 0.8
VPS16-204ENST00000417508 OAZ2O95190 189 aa20.04■□□□□ 0.8
VPS16-204ENST00000417508 TXLNAP40222 546 aa20.04■□□□□ 0.8
VPS16-204ENST00000417508 PHLDB3Q6NSJ2 640 aa20.04■□□□□ 0.8
VPS16-204ENST00000417508 MAP4K3Q8IVH8 894 aa20.04■□□□□ 0.8
VPS16-204ENST00000417508 ITFG1Q8TB96 612 aa20.04■□□□□ 0.8
VPS16-204ENST00000417508 MSTO1Q9BUK6 570 aa20.04■□□□□ 0.8
VPS16-204ENST00000417508 ZSCAN16Q9H4T2 348 aaPredicted RBP20.04■□□□□ 0.8
VPS16-204ENST00000417508 TUBGCP4Q9UGJ1 667 aa20.04■□□□□ 0.8
VPS16-204ENST00000417508 AFF4Q9UHB7 1163 aaKnown RBP20.04■□□□□ 0.8
VPS16-204ENST00000417508 FBXO2Q9UK22 296 aaPredicted RBP20.04■□□□□ 0.8
VPS16-204ENST00000417508 MRPS23Q9Y3D9 190 aaKnown RBP20.04■□□□□ 0.8
VPS16-204ENST00000417508 KRBA1A5PL33 1030 aa20.03■□□□□ 0.8
VPS16-204ENST00000417508 STK25O00506 426 aa20.03■□□□□ 0.8
VPS16-204ENST00000417508 MICAL2O94851 1124 aa20.03■□□□□ 0.8
VPS16-204ENST00000417508 RHOP08100 348 aa20.03■□□□□ 0.8
VPS16-204ENST00000417508 TNFSF9P41273 254 aa20.03■□□□□ 0.8
VPS16-204ENST00000417508 AARSP49588 968 aaKnown RBP eCLIP20.03■□□□□ 0.8
VPS16-204ENST00000417508 ARPP19P56211 112 aa20.03■□□□□ 0.8
VPS16-204ENST00000417508 RESTQ13127 1097 aa20.03■□□□□ 0.8
VPS16-204ENST00000417508 ENOX2Q16206 610 aaKnown RBP20.03■□□□□ 0.8
VPS16-204ENST00000417508 RRAGBQ5VZM2 374 aa20.03■□□□□ 0.8
VPS16-204ENST00000417508 PARM1Q6UWI2 310 aa20.03■□□□□ 0.8
VPS16-204ENST00000417508 ZNF720Q7Z2F6 126 aa20.03■□□□□ 0.8
VPS16-204ENST00000417508 HVCN1Q96D96 273 aa20.03■□□□□ 0.8
VPS16-204ENST00000417508 SHDQ96IW2 340 aa20.03■□□□□ 0.8
VPS16-204ENST00000417508 PHOX2BQ99453 314 aa20.03■□□□□ 0.8
VPS16-204ENST00000417508 CYP4F11Q9HBI6 524 aa20.03■□□□□ 0.8
VPS16-204ENST00000417508 HCFC1R1Q9NWW0 138 aa20.03■□□□□ 0.8
VPS16-204ENST00000417508 SEL1LQ9UBV2 794 aa20.03■□□□□ 0.8
VPS16-204ENST00000417508 CPSF3Q9UKF6 684 aaKnown RBP20.03■□□□□ 0.8
VPS16-204ENST00000417508 DERAQ9Y315 318 aa20.03■□□□□ 0.8
VPS16-204ENST00000417508 STYXL1Q9Y6J8 313 aa20.03■□□□□ 0.8
VPS16-204ENST00000417508 PROB1E7EW31 1015 aa20.02■□□□□ 0.8
VPS16-204ENST00000417508 ZNF197O14709 1029 aa20.02■□□□□ 0.8
VPS16-204ENST00000417508 PI15O43692 258 aa20.02■□□□□ 0.8
VPS16-204ENST00000417508 RFX1P22670 979 aa20.02■□□□□ 0.8
VPS16-204ENST00000417508 NMT1P30419 496 aaKnown RBP20.02■□□□□ 0.8
VPS16-204ENST00000417508 YWHAHQ04917 246 aaPredicted RBP20.02■□□□□ 0.8
VPS16-204ENST00000417508 SLC39A14Q15043 492 aa20.02■□□□□ 0.8
VPS16-204ENST00000417508 POSTNQ15063 836 aa20.02■□□□□ 0.8
VPS16-204ENST00000417508 SPATA1Q5VX52 437 aa20.02■□□□□ 0.8
VPS16-204ENST00000417508 USP49Q70CQ1 688 aa20.02■□□□□ 0.8
VPS16-204ENST00000417508 SV2BQ7L1I2 683 aa20.02■□□□□ 0.8
VPS16-204ENST00000417508 CCDC105Q8IYK2 499 aa20.02■□□□□ 0.8
VPS16-204ENST00000417508 ELMOD1Q8N336 334 aa20.02■□□□□ 0.8
VPS16-204ENST00000417508 BEST2Q8NFU1 509 aa20.02■□□□□ 0.8
VPS16-204ENST00000417508 GPR152Q8TDT2 470 aa20.02■□□□□ 0.8
VPS16-204ENST00000417508 FGF14Q92915 247 aa20.02■□□□□ 0.8
VPS16-204ENST00000417508 ASB7Q9H672 318 aa20.02■□□□□ 0.8
VPS16-204ENST00000417508 PTPRZ1P23471 2315 aaPredicted RBP20.01■□□□□ 0.79
VPS16-204ENST00000417508 GAP43P17677 238 aa20.01■□□□□ 0.79
VPS16-204ENST00000417508 PFKPQ01813 784 aa20.01■□□□□ 0.79
VPS16-204ENST00000417508 SPAG1Q07617 926 aa20.01■□□□□ 0.79
VPS16-204ENST00000417508 SPECC1Q5M775 1068 aa20.01■□□□□ 0.79
VPS16-204ENST00000417508 SLC39A4Q6P5W5 647 aa20.01■□□□□ 0.79
VPS16-204ENST00000417508 CCDC73Q6ZRK6 1079 aa20.01■□□□□ 0.79
VPS16-204ENST00000417508 USP37Q86T82 979 aa20.01■□□□□ 0.79
VPS16-204ENST00000417508 NPAS3Q8IXF0 933 aa20.01■□□□□ 0.79
VPS16-204ENST00000417508 DTWD2Q8NBA8 298 aa20.01■□□□□ 0.79
VPS16-204ENST00000417508 RPP25Q9BUL9 199 aaKnown RBP20.01■□□□□ 0.79
VPS16-204ENST00000417508 ARHGEF3Q9NR81 526 aa20.01■□□□□ 0.79
VPS16-204ENST00000417508 CA14Q9ULX7 337 aa20.01■□□□□ 0.79
VPS16-204ENST00000417508 INSL5Q9Y5Q6 135 aa20.01■□□□□ 0.79
VPS16-204ENST00000417508 ZFHX2Q9C0A1 2572 aaPredicted RBP20.01■□□□□ 0.79
VPS16-204ENST00000417508 OR6C75A6NL08 312 aa20■□□□□ 0.79
VPS16-204ENST00000417508 K7ELQ4 463 aaPredicted RBP20■□□□□ 0.79
VPS16-204ENST00000417508 SEC24AO95486 1093 aa20■□□□□ 0.79
VPS16-204ENST00000417508 PDIA4P13667 645 aaKnown RBP20■□□□□ 0.79
VPS16-204ENST00000417508 TYMPP19971 482 aa20■□□□□ 0.79
VPS16-204ENST00000417508 GPC5P78333 572 aa20■□□□□ 0.79
VPS16-204ENST00000417508 ADCY1Q08828 1119 aa20■□□□□ 0.79
VPS16-204ENST00000417508 ZBTB41Q5SVQ8 909 aa20■□□□□ 0.79
VPS16-204ENST00000417508 CYP4A22Q5TCH4 519 aa20■□□□□ 0.79
VPS16-204ENST00000417508 ADALQ6DHV7 355 aa20■□□□□ 0.79
VPS16-204ENST00000417508 IQCEQ6IPM2 695 aa20■□□□□ 0.79
VPS16-204ENST00000417508 DSTYKQ6XUX3 929 aa20■□□□□ 0.79
VPS16-204ENST00000417508 DYMQ7RTS9 669 aa20■□□□□ 0.79
VPS16-204ENST00000417508 LEMD2Q8NC56 503 aa20■□□□□ 0.79
VPS16-204ENST00000417508 ZNF512Q96ME7 567 aaPredicted RBP20■□□□□ 0.79
VPS16-204ENST00000417508 TBC1D17Q9HA65 648 aa20■□□□□ 0.79
VPS16-204ENST00000417508 AGO2Q9UKV8 859 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms