RNA–Protein interactions for RNA: ENST00000417478.6

RUFY3-203, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RUFY3, Length 2,143 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-203ENST00000417478 NXF3Q9H4D5 531 aaKnown RBP21.56■■□□□ 1.04
RUFY3-203ENST00000417478 RPF1Q9H9Y2 349 aaKnown RBP21.56■■□□□ 1.04
RUFY3-203ENST00000417478 SNX12Q9UMY4 172 aa21.56■■□□□ 1.04
RUFY3-203ENST00000417478 DDX3XO00571 662 aaKnown RBP eCLIP21.56■■□□□ 1.04
RUFY3-203ENST00000417478 CD4P01730 458 aa21.56■■□□□ 1.04
RUFY3-203ENST00000417478 NAP1L1P55209 391 aaKnown RBP21.56■■□□□ 1.04
RUFY3-203ENST00000417478 MBTPS1Q14703 1052 aa21.56■■□□□ 1.04
RUFY3-203ENST00000417478 DCAF4L1Q3SXM0 396 aa21.56■■□□□ 1.04
RUFY3-203ENST00000417478 SLC30A5Q8TAD4 765 aa21.56■■□□□ 1.04
RUFY3-203ENST00000417478 CGRRF1Q99675 332 aa21.56■■□□□ 1.04
RUFY3-203ENST00000417478 CXCL16Q9H2A7 254 aa21.56■■□□□ 1.04
RUFY3-203ENST00000417478 ARGLU1Q9NWB6 273 aaPredicted RBP21.56■■□□□ 1.04
RUFY3-203ENST00000417478 BUB1O43683 1085 aa21.55■■□□□ 1.04
RUFY3-203ENST00000417478 SLC10A6Q3KNW5 377 aa21.55■■□□□ 1.04
RUFY3-203ENST00000417478 SLC39A5Q6ZMH5 540 aa21.55■■□□□ 1.04
RUFY3-203ENST00000417478 C15orf39Q6ZRI6 1047 aa21.55■■□□□ 1.04
RUFY3-203ENST00000417478 TMEM130Q8N3G9 435 aa21.55■■□□□ 1.04
RUFY3-203ENST00000417478 FBXL13Q8NEE6 735 aa21.55■■□□□ 1.04
RUFY3-203ENST00000417478 RPGRIP1Q96KN7 1286 aa21.55■■□□□ 1.04
RUFY3-203ENST00000417478 TRIM6Q9C030 488 aaPredicted RBP21.55■■□□□ 1.04
RUFY3-203ENST00000417478 SNTG2Q9NY99 539 aa21.55■■□□□ 1.04
RUFY3-203ENST00000417478 PADI3Q9ULW8 664 aa21.55■■□□□ 1.04
RUFY3-203ENST00000417478 LACTBL1A8MY62 500 aa21.55■■□□□ 1.04
RUFY3-203ENST00000417478 FOXN3O00409 490 aaPredicted RBP21.55■■□□□ 1.04
RUFY3-203ENST00000417478 TDRD10Q5VZ19 366 aaKnown RBP21.55■■□□□ 1.04
RUFY3-203ENST00000417478 TWF2Q6IBS0 349 aaKnown RBP21.55■■□□□ 1.04
RUFY3-203ENST00000417478 EFCAB13Q8IY85 973 aa21.55■■□□□ 1.04
RUFY3-203ENST00000417478 ACAP3Q96P50 834 aa21.55■■□□□ 1.04
RUFY3-203ENST00000417478 APOL6Q9BWW8 343 aa21.55■■□□□ 1.04
RUFY3-203ENST00000417478 ERVK-5Q9HDB9 667 aa21.55■■□□□ 1.04
RUFY3-203ENST00000417478 PCDHGC5Q9Y5F6 944 aa21.55■■□□□ 1.04
RUFY3-203ENST00000417478 MROH7Q68CQ1 1323 aa21.54■■□□□ 1.04
RUFY3-203ENST00000417478 C4BPAP04003 597 aaKnown RBP21.54■■□□□ 1.04
RUFY3-203ENST00000417478 H2AFZP0C0S5 128 aa21.54■■□□□ 1.04
RUFY3-203ENST00000417478 TCP1P17987 556 aaKnown RBP21.54■■□□□ 1.04
RUFY3-203ENST00000417478 GRM5P41594 1212 aa21.54■■□□□ 1.04
RUFY3-203ENST00000417478 IFI16Q16666 785 aaKnown RBP21.54■■□□□ 1.04
RUFY3-203ENST00000417478 H2AFVQ71UI9 128 aa21.54■■□□□ 1.04
RUFY3-203ENST00000417478 OLIG1Q8TAK6 271 aa21.54■■□□□ 1.04
RUFY3-203ENST00000417478 LNX1Q8TBB1 728 aaPredicted RBP21.54■■□□□ 1.04
RUFY3-203ENST00000417478 RAB20Q9NX57 234 aa21.54■■□□□ 1.04
RUFY3-203ENST00000417478 HYOU1Q9Y4L1 999 aa21.54■■□□□ 1.04
RUFY3-203ENST00000417478 SRGAP2O75044 1071 aa21.53■■□□□ 1.04
RUFY3-203ENST00000417478 COL6A1P12109 1028 aa21.53■■□□□ 1.04
RUFY3-203ENST00000417478 MFAP3P55082 362 aa21.53■■□□□ 1.04
RUFY3-203ENST00000417478 PAK2Q13177 524 aa21.53■■□□□ 1.04
RUFY3-203ENST00000417478 ZACNQ401N2 412 aa21.53■■□□□ 1.04
RUFY3-203ENST00000417478 SEZ6LQ9BYH1 1024 aa21.53■■□□□ 1.04
RUFY3-203ENST00000417478 MTMR12Q9C0I1 747 aa21.53■■□□□ 1.04
RUFY3-203ENST00000417478 RNF39Q9H2S5 420 aa21.53■■□□□ 1.04
RUFY3-203ENST00000417478 GPR182O15218 404 aa21.53■■□□□ 1.04
RUFY3-203ENST00000417478 CAND2O75155 1236 aa21.53■■□□□ 1.04
RUFY3-203ENST00000417478 NFICP08651 508 aa21.53■■□□□ 1.04
RUFY3-203ENST00000417478 AKAP5P24588 427 aa21.53■■□□□ 1.04
RUFY3-203ENST00000417478 TFAMQ00059 246 aaKnown RBP21.53■■□□□ 1.04
RUFY3-203ENST00000417478 BIRC3Q13489 604 aa21.53■■□□□ 1.04
RUFY3-203ENST00000417478 TRIM60Q495X7 471 aa21.53■■□□□ 1.04
RUFY3-203ENST00000417478 WDR49Q8IV35 697 aa21.53■■□□□ 1.04
RUFY3-203ENST00000417478 TET1Q8NFU7 2136 aa21.53■■□□□ 1.04
RUFY3-203ENST00000417478 NT5C1BQ96P26 610 aa21.53■■□□□ 1.04
RUFY3-203ENST00000417478 PI4K2AQ9BTU6 479 aa21.53■■□□□ 1.04
RUFY3-203ENST00000417478 RNF19AQ9NV58 838 aa21.53■■□□□ 1.04
RUFY3-203ENST00000417478 RALGAPA2Q2PPJ7 1873 aa21.53■■□□□ 1.04
RUFY3-203ENST00000417478 A0A0A6YYK5 440 aaPredicted RBP21.52■■□□□ 1.04
RUFY3-203ENST00000417478 ZC3H11AO75152 810 aaKnown RBP eCLIP21.52■■□□□ 1.04
RUFY3-203ENST00000417478 VNN1O95497 513 aa21.52■■□□□ 1.04
RUFY3-203ENST00000417478 SCN5AQ14524 2016 aa21.52■■□□□ 1.04
RUFY3-203ENST00000417478 JADE1Q6IE81 842 aa21.52■■□□□ 1.04
RUFY3-203ENST00000417478 APBB1IPQ7Z5R6 666 aaPredicted RBP21.52■■□□□ 1.04
RUFY3-203ENST00000417478 GLYCTKQ8IVS8 523 aa21.52■■□□□ 1.04
RUFY3-203ENST00000417478 SMG8Q8ND04 991 aaKnown RBP21.52■■□□□ 1.04
RUFY3-203ENST00000417478 PAWRQ96IZ0 340 aaKnown RBP21.52■■□□□ 1.04
RUFY3-203ENST00000417478 CCDC94Q9BW85 323 aaPredicted RBP21.52■■□□□ 1.04
RUFY3-203ENST00000417478 PDCD11Q14690 1871 aaKnown RBP21.52■■□□□ 1.04
RUFY3-203ENST00000417478 MGEA5O60502 916 aa21.52■■□□□ 1.03
RUFY3-203ENST00000417478 PALMO75781 387 aa21.52■■□□□ 1.03
RUFY3-203ENST00000417478 IL18RAPO95256 599 aa21.52■■□□□ 1.03
RUFY3-203ENST00000417478 ZSCAN20P17040 1043 aaPredicted RBP21.52■■□□□ 1.03
RUFY3-203ENST00000417478 TNFAIP3P21580 790 aa21.52■■□□□ 1.03
RUFY3-203ENST00000417478 PPM1KQ8N3J5 372 aa21.52■■□□□ 1.03
RUFY3-203ENST00000417478 FAM81BQ96LP2 452 aa21.52■■□□□ 1.03
RUFY3-203ENST00000417478 IPPQ9Y573 584 aa21.52■■□□□ 1.03
RUFY3-203ENST00000417478 UMODL1Q5DID0 1318 aa21.51■■□□□ 1.03
RUFY3-203ENST00000417478 TLE2Q04725 743 aa21.51■■□□□ 1.03
RUFY3-203ENST00000417478 KYAT1Q16773 422 aa21.51■■□□□ 1.03
RUFY3-203ENST00000417478 LRRC8DQ7L1W4 858 aa21.51■■□□□ 1.03
RUFY3-203ENST00000417478 CAGE1Q8TC20 777 aa21.51■■□□□ 1.03
RUFY3-203ENST00000417478 SHC3Q92529 594 aa21.51■■□□□ 1.03
RUFY3-203ENST00000417478 OSBPL9Q96SU4 736 aa21.51■■□□□ 1.03
RUFY3-203ENST00000417478 MMS19Q96T76 1030 aa21.51■■□□□ 1.03
RUFY3-203ENST00000417478 AGPAT1Q99943 283 aa21.51■■□□□ 1.03
RUFY3-203ENST00000417478 MCOLN1Q9GZU1 580 aa21.51■■□□□ 1.03
RUFY3-203ENST00000417478 RECQL4O94761 1208 aa21.5■■□□□ 1.03
RUFY3-203ENST00000417478 HLA-DRAP01903 254 aa21.5■■□□□ 1.03
RUFY3-203ENST00000417478 SURF1Q15526 300 aa21.5■■□□□ 1.03
RUFY3-203ENST00000417478 DUOXA2Q1HG44 320 aa21.5■■□□□ 1.03
RUFY3-203ENST00000417478 ENOSF1Q7L5Y1 443 aa21.5■■□□□ 1.03
RUFY3-203ENST00000417478 ANKRD33Q7Z3H0 272 aa21.5■■□□□ 1.03
RUFY3-203ENST00000417478 FAM71AQ8IYT1 594 aa21.5■■□□□ 1.03
RUFY3-203ENST00000417478 MSANTD4Q8NCY6 345 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms