RNA–Protein interactions for RNA: ENST00000417243.5

TRAPPC12-206, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 1,047 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-206ENST00000417243 PES1O00541 588 aaKnown RBP13.51□□□□□ -0.25
TRAPPC12-206ENST00000417243 PODXLO00592 558 aa13.51□□□□□ -0.25
TRAPPC12-206ENST00000417243 TEX33O43247 280 aa13.51□□□□□ -0.25
TRAPPC12-206ENST00000417243 ASS1P00966 412 aaKnown RBP13.51□□□□□ -0.25
TRAPPC12-206ENST00000417243 POLR2BP30876 1174 aaKnown RBP13.51□□□□□ -0.25
TRAPPC12-206ENST00000417243 AARSP49588 968 aaKnown RBP eCLIP13.51□□□□□ -0.25
TRAPPC12-206ENST00000417243 GUCY2FP51841 1108 aa13.51□□□□□ -0.25
TRAPPC12-206ENST00000417243 UBXN1Q04323 297 aa13.51□□□□□ -0.25
TRAPPC12-206ENST00000417243 RNASELQ05823 741 aaKnown RBP13.51□□□□□ -0.25
TRAPPC12-206ENST00000417243 KCNMA1Q12791 1236 aa13.51□□□□□ -0.25
TRAPPC12-206ENST00000417243 TRIM65Q6PJ69 517 aa13.51□□□□□ -0.25
TRAPPC12-206ENST00000417243 TMCO2Q7Z6W1 182 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC12-206ENST00000417243 ZNF280BQ86YH2 543 aa13.51□□□□□ -0.25
TRAPPC12-206ENST00000417243 FAM193BQ96PV7 902 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC12-206ENST00000417243 IMPG2Q9BZV3 1241 aa13.51□□□□□ -0.25
TRAPPC12-206ENST00000417243 PLCB1Q9NQ66 1216 aa13.51□□□□□ -0.25
TRAPPC12-206ENST00000417243 CASTOR2A6NHX0 329 aa13.5□□□□□ -0.25
TRAPPC12-206ENST00000417243 PPEF2O14830 753 aa13.5□□□□□ -0.25
TRAPPC12-206ENST00000417243 PHACTR2O75167 634 aa13.5□□□□□ -0.25
TRAPPC12-206ENST00000417243 LINC00271P0C7V0 271 aa13.5□□□□□ -0.25
TRAPPC12-206ENST00000417243 LAG3P18627 525 aa13.5□□□□□ -0.25
TRAPPC12-206ENST00000417243 RFX1P22670 979 aa13.5□□□□□ -0.25
TRAPPC12-206ENST00000417243 PON1P27169 355 aa13.5□□□□□ -0.25
TRAPPC12-206ENST00000417243 TAF6P49848 677 aa13.5□□□□□ -0.25
TRAPPC12-206ENST00000417243 CLCNKBP51801 687 aa13.5□□□□□ -0.25
TRAPPC12-206ENST00000417243 ZNF75DP51815 510 aa13.5□□□□□ -0.25
TRAPPC12-206ENST00000417243 NOP14P78316 857 aaKnown RBP13.5□□□□□ -0.25
TRAPPC12-206ENST00000417243 MYO1EQ12965 1108 aa13.5□□□□□ -0.25
TRAPPC12-206ENST00000417243 TRPC3Q13507 836 aa13.5□□□□□ -0.25
TRAPPC12-206ENST00000417243 BTG3Q14201 252 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC12-206ENST00000417243 SGSM1Q2NKQ1 1148 aa13.5□□□□□ -0.25
TRAPPC12-206ENST00000417243 ZNF699Q32M78 642 aa13.5□□□□□ -0.25
TRAPPC12-206ENST00000417243 PAN2Q504Q3 1202 aaKnown RBP13.5□□□□□ -0.25
TRAPPC12-206ENST00000417243 DPY19L2P1Q6NXN4 242 aa13.5□□□□□ -0.25
TRAPPC12-206ENST00000417243 FAM117BQ6P1L5 589 aa13.5□□□□□ -0.25
TRAPPC12-206ENST00000417243 TDHQ8IZJ6 230 aa13.5□□□□□ -0.25
TRAPPC12-206ENST00000417243 CCDC150Q8NCX0 1101 aa13.5□□□□□ -0.25
TRAPPC12-206ENST00000417243 EHBP1Q8NDI1 1231 aa13.5□□□□□ -0.25
TRAPPC12-206ENST00000417243 SEMA4DQ92854 862 aa13.5□□□□□ -0.25
TRAPPC12-206ENST00000417243 CLP1Q92989 425 aaKnown RBP13.5□□□□□ -0.25
TRAPPC12-206ENST00000417243 IQCDQ96DY2 449 aa13.5□□□□□ -0.25
TRAPPC12-206ENST00000417243 TRIM5Q9C035 493 aa13.5□□□□□ -0.25
TRAPPC12-206ENST00000417243 INTS2Q9H0H0 1204 aaKnown RBP13.5□□□□□ -0.25
TRAPPC12-206ENST00000417243 FAM124BQ9H5Z6 455 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC12-206ENST00000417243 DNAJB4Q9UDY4 337 aa13.5□□□□□ -0.25
TRAPPC12-206ENST00000417243 FBXL5Q9UKA1 691 aa13.5□□□□□ -0.25
TRAPPC12-206ENST00000417243 AGAP1Q9UPQ3 857 aa13.5□□□□□ -0.25
TRAPPC12-206ENST00000417243 VWA8A3KMH1 1905 aa13.49□□□□□ -0.25
TRAPPC12-206ENST00000417243 TLL1O43897 1013 aa13.49□□□□□ -0.25
TRAPPC12-206ENST00000417243 CST3P01034 146 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC12-206ENST00000417243 KRT19P08727 400 aa13.49□□□□□ -0.25
TRAPPC12-206ENST00000417243 CDC25BP30305 580 aa13.49□□□□□ -0.25
TRAPPC12-206ENST00000417243 MYL6P60660 151 aa13.49□□□□□ -0.25
TRAPPC12-206ENST00000417243 GCNT1Q02742 428 aa13.49□□□□□ -0.25
TRAPPC12-206ENST00000417243 SYCP1Q15431 976 aa13.49□□□□□ -0.25
TRAPPC12-206ENST00000417243 SV2CQ496J9 727 aa13.49□□□□□ -0.25
TRAPPC12-206ENST00000417243 FIGNQ5HY92 759 aa13.49□□□□□ -0.25
TRAPPC12-206ENST00000417243 DCLRE1AQ6PJP8 1040 aa13.49□□□□□ -0.25
TRAPPC12-206ENST00000417243 VSTM4Q8IW00 320 aa13.49□□□□□ -0.25
TRAPPC12-206ENST00000417243 TMEM130Q8N3G9 435 aa13.49□□□□□ -0.25
TRAPPC12-206ENST00000417243 C3orf58Q8NDZ4 430 aa13.49□□□□□ -0.25
TRAPPC12-206ENST00000417243 FAM81BQ96LP2 452 aa13.49□□□□□ -0.25
TRAPPC12-206ENST00000417243 NT5C1BQ96P26 610 aa13.49□□□□□ -0.25
TRAPPC12-206ENST00000417243 PAAF1Q9BRP4 392 aa13.49□□□□□ -0.25
TRAPPC12-206ENST00000417243 ZBED2Q9BTP6 218 aa13.49□□□□□ -0.25
TRAPPC12-206ENST00000417243 SIX2Q9NPC8 291 aa13.49□□□□□ -0.25
TRAPPC12-206ENST00000417243 GDAP2Q9NXN4 497 aa13.49□□□□□ -0.25
TRAPPC12-206ENST00000417243 HCSTQ9UBK5 93 aa13.49□□□□□ -0.25
TRAPPC12-206ENST00000417243 APEX2Q9UBZ4 518 aa13.49□□□□□ -0.25
TRAPPC12-206ENST00000417243 R3HCC1Q9Y3T6 440 aaKnown RBP13.49□□□□□ -0.25
TRAPPC12-206ENST00000417243 RWDD3Q9Y3V2 267 aa13.49□□□□□ -0.25
TRAPPC12-206ENST00000417243 PCDHA11Q9Y5I1 949 aa13.49□□□□□ -0.25
TRAPPC12-206ENST00000417243 MRPL42Q9Y6G3 142 aaKnown RBP13.49□□□□□ -0.25
TRAPPC12-206ENST00000417243 A0A1W2PPC1 479 aa13.48□□□□□ -0.25
TRAPPC12-206ENST00000417243 KIF4AO95239 1232 aa13.48□□□□□ -0.25
TRAPPC12-206ENST00000417243 EFEMP2O95967 443 aa13.48□□□□□ -0.25
TRAPPC12-206ENST00000417243 GALTP07902 379 aa13.48□□□□□ -0.25
TRAPPC12-206ENST00000417243 SLC9A1P19634 815 aa13.48□□□□□ -0.25
TRAPPC12-206ENST00000417243 PPM1AP35813 382 aa13.48□□□□□ -0.25
TRAPPC12-206ENST00000417243 SLC11A1P49279 550 aa13.48□□□□□ -0.25
TRAPPC12-206ENST00000417243 LILRA4P59901 499 aa13.48□□□□□ -0.25
TRAPPC12-206ENST00000417243 PLCB2Q00722 1185 aa13.48□□□□□ -0.25
TRAPPC12-206ENST00000417243 ZNF667Q5HYK9 610 aa13.48□□□□□ -0.25
TRAPPC12-206ENST00000417243 WDR44Q5JSH3 913 aa13.48□□□□□ -0.25
TRAPPC12-206ENST00000417243 SCARA3Q6AZY7 606 aa13.48□□□□□ -0.25
TRAPPC12-206ENST00000417243 CD300LGQ6UXG3 332 aa13.48□□□□□ -0.25
TRAPPC12-206ENST00000417243 LIMS2Q7Z4I7 341 aa13.48□□□□□ -0.25
TRAPPC12-206ENST00000417243 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC12-206ENST00000417243 FIBCD1Q8N539 461 aa13.48□□□□□ -0.25
TRAPPC12-206ENST00000417243 HPDLQ96IR7 371 aa13.48□□□□□ -0.25
TRAPPC12-206ENST00000417243 ZNF558Q96NG5 402 aa13.48□□□□□ -0.25
TRAPPC12-206ENST00000417243 CRACR2AQ9BSW2 395 aa13.48□□□□□ -0.25
TRAPPC12-206ENST00000417243 BCO2Q9BYV7 579 aa13.48□□□□□ -0.25
TRAPPC12-206ENST00000417243 TTYH3Q9C0H2 523 aa13.48□□□□□ -0.25
TRAPPC12-206ENST00000417243 NIF3L1Q9GZT8 377 aa13.48□□□□□ -0.25
TRAPPC12-206ENST00000417243 GANQ9H2C0 597 aa13.48□□□□□ -0.25
TRAPPC12-206ENST00000417243 APOBEC3GQ9HC16 384 aaKnown RBP13.48□□□□□ -0.25
TRAPPC12-206ENST00000417243 MARCH5Q9NX47 278 aa13.48□□□□□ -0.25
TRAPPC12-206ENST00000417243 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC12-206ENST00000417243 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms