RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 RFFLQ8WZ73 363 aa11.44□□□□□ -0.58
SMPD4P1-201ENST00000416717 APOL6Q9BWW8 343 aa11.44□□□□□ -0.58
SMPD4P1-201ENST00000416717 EIF2AQ9BY44 585 aaKnown RBP11.44□□□□□ -0.58
SMPD4P1-201ENST00000416717 POLIQ9UNA4 740 aa11.44□□□□□ -0.58
SMPD4P1-201ENST00000416717 COG5Q9UP83 839 aa11.44□□□□□ -0.58
SMPD4P1-201ENST00000416717 Q9Y3F1 56 aa11.44□□□□□ -0.58
SMPD4P1-201ENST00000416717 TMEM110-MUSTN1A8MSY1 372 aa11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 BUB1BO60566 1050 aaPredicted RBP11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 RTN2O75298 545 aa11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 IL18RAPO95256 599 aa11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 ITGB3P05106 788 aa11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 HOXA11P31270 313 aaPredicted RBP11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 SCN1AP35498 2009 aa11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 RAP1GAPP47736 663 aa11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 C2orf54Q08AI8 447 aa11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 IFI16Q16666 785 aaKnown RBP11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 SGSM1Q2NKQ1 1148 aa11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 C1orf127Q8N9H9 656 aa11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 LRRC57Q8N9N7 239 aa11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 CPA5Q8WXQ8 436 aa11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 ACAP3Q96P50 834 aa11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 KATNAL1Q9BW62 490 aa11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 ISCUQ9H1K1 167 aa11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 SNTG2Q9NY99 539 aa11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 CTTNBP2NLQ9P2B4 639 aa11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 THAP12O43422 761 aa11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 RARBP10826 455 aa11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 DARSP14868 501 aaKnown RBP11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 TBXAS1P24557 533 aaPredicted RBP11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 GNA15P30679 374 aa11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 HTRA3P83110 453 aa11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 CCDC181Q5TID7 509 aa11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 PEX26Q7Z412 305 aa11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 CD99L2Q8TCZ2 262 aa11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 FAM81BQ96LP2 452 aa11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 SIX4Q9UIU6 781 aa11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 PIN4Q9Y237 131 aaKnown RBP11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 PCDHB2Q9Y5E7 798 aa11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 SCN10AQ9Y5Y9 1956 aa11.43□□□□□ -0.58
SMPD4P1-201ENST00000416717 NCANO14594 1321 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 CASP8AP2Q9UKL3 1982 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 A0A0A6YYK5 440 aaPredicted RBP11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 KCNK3O14649 394 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 PRKAR2AP13861 404 aaKnown RBP11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 TCP1P17987 556 aaKnown RBP11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 EIF4BP23588 611 aaKnown RBP11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 GJA9P57773 515 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 GPC5P78333 572 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 CKAP4Q07065 602 aaKnown RBP11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 ORC1Q13415 861 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 SNX17Q15036 470 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 RPS6KA1Q15418 735 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 NBPF20Q3BBV1 942 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 WDR72Q3MJ13 1102 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 NAA35Q5VZE5 725 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 RABGGTAQ92696 567 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 ZNF653Q96CK0 615 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 BTBD6Q96KE9 485 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 HINFPQ9BQA5 517 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 TRIM6Q9C030 488 aaPredicted RBP11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 NIF3L1Q9GZT8 377 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 XYLT2Q9H1B5 865 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 SPC25Q9HBM1 224 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 XPNPEP3Q9NQH7 507 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 CISHQ9NSE2 258 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 MROH7Q68CQ1 1323 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 SEPT4O43236 478 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 KIF4AO95239 1232 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 CTSHP09668 335 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 AKAP5P24588 427 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 POLR2BP30876 1174 aaKnown RBP11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 CDH8P55286 799 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 MRPS25P82663 173 aaKnown RBP11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 TMEM132DQ14C87 1099 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 GLRA4Q5JXX5 417 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 LLGL2Q6P1M3 1020 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 TAF4BQ92750 862 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 CYFIP2Q96F07 1278 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 KIF12Q96FN5 646 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 MTG1Q9BT17 334 aaPredicted RBP11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 PARD6BQ9BYG5 372 aa11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 NXF3Q9H4D5 531 aaKnown RBP11.42□□□□□ -0.58
SMPD4P1-201ENST00000416717 GNAT1P11488 350 aa11.41□□□□□ -0.58
SMPD4P1-201ENST00000416717 GZMAP12544 262 aa11.41□□□□□ -0.58
SMPD4P1-201ENST00000416717 BPIFB4P59827 614 aa11.41□□□□□ -0.58
SMPD4P1-201ENST00000416717 CLEC16AQ2KHT3 1053 aa11.41□□□□□ -0.58
SMPD4P1-201ENST00000416717 ACAD10Q6JQN1 1059 aa11.41□□□□□ -0.58
SMPD4P1-201ENST00000416717 GDF6Q6KF10 455 aaPredicted RBP11.41□□□□□ -0.58
SMPD4P1-201ENST00000416717 NOTUMQ6P988 496 aa11.41□□□□□ -0.58
SMPD4P1-201ENST00000416717 SLC27A1Q6PCB7 646 aa11.41□□□□□ -0.58
SMPD4P1-201ENST00000416717 GPR161Q8N6U8 529 aaKnown RBP11.41□□□□□ -0.58
SMPD4P1-201ENST00000416717 CCDC94Q9BW85 323 aaPredicted RBP11.41□□□□□ -0.58
SMPD4P1-201ENST00000416717 ANKZF1Q9H8Y5 726 aa11.41□□□□□ -0.58
SMPD4P1-201ENST00000416717 KLK14Q9P0G3 267 aa11.41□□□□□ -0.58
SMPD4P1-201ENST00000416717 AGAP1Q9UPQ3 857 aa11.41□□□□□ -0.58
SMPD4P1-201ENST00000416717 PRLRP16471 622 aa11.4□□□□□ -0.58
SMPD4P1-201ENST00000416717 GRM5P41594 1212 aa11.4□□□□□ -0.58
SMPD4P1-201ENST00000416717 PAFAH1B1P43034 410 aa11.4□□□□□ -0.58
SMPD4P1-201ENST00000416717 ASPAP45381 313 aa11.4□□□□□ -0.58
SMPD4P1-201ENST00000416717 MESDQ14696 234 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms